Sequence details NCBI ID: XM_004865975.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sbno2
Gene Name strawberry notch homolog 2 (Drosophila), transcript variant X1
Entrez Gene ID 101707926

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SBNO2 ENSCPOG00000007477 (Guinea pig)

Gene Details

strawberry notch homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006744, Guinea pig)

Protein Percentage 90.36%
CDS Percentage 88.22%
Ka/Ks Ratio 0.07546 (Ka = 0.0507, Ks = 0.6714)

SBNO2 ENSG00000064932 (Human)

Gene Details

strawberry notch homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000354733, Human)

Protein Percentage 87.36%
CDS Percentage 85.2%
Ka/Ks Ratio 0.05628 (Ka = 0.0657, Ks = 1.1667)

Sbno2 ENSMUSG00000035673 (Mouse)

Gene Details

strawberry notch homolog 2 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041635, Mouse)

Protein Percentage 86.22%
CDS Percentage 82.48%
Ka/Ks Ratio 0.05991 (Ka = 0.0708, Ks = 1.1817)

Sbno2 ENSRNOG00000013987 (Rat)

Gene Details

strawberry notch homolog 2 (Drosophila) (Sbno2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062533, Rat)

Protein Percentage 86.84%
CDS Percentage 82.62%
Ka/Ks Ratio 0.05438 (Ka = 0.0694, Ks = 1.2761)

Genome Location

Sequence Coding sequence

Length: 4062 bp    Location: 7479710..7532938   Strand: +
Raw sequence   
>XM_004865975.1
ATGCTCGCAGTGGGGCCTGCCATGGACCGGGAGTGCCCACAGCACGAGCCCCCTCCCGCCGGCATCCTGTACAGCCCGACCCCACTGCAGAATGGCCTCCTGCATTGTCCCTGGTGGAGTAGCTTCTCACCGCCGTCCTACCCAGGCTTCTCCAGTGACAGCCACGTGTTCTCGAGCTCGGCCTCCTTCCTGGGTGGCCAGCCCTGCCCCGATGCCAGCTATGCTACCACAGCCACCGCCCCTAGCTACCTGTCCAAGAGTGGCACCTTTCCTCAGGACTCCTACTTCGAAGACCTCTCCAATGCCTCCATCTTCTCCTCATCAGTGGATTCCCTGTCGGACATCGTGGACACACCTGATTTTCTGCCAGCAGACAGCCTTAGCCAGGTGCCCACCATCTGGGACGTGAGCACTGCCTCATCTACCCATGACAAGCTGTTCCTGCCGGGTGGACCATTCCCAGGCCTTGAGGACCCTGTGACCTCCTTGCCCAGCACCTCCCTTCTCGTCAGCTACCAGTCCCAAAGTCAGCCTGAGGATGAGGTGGAGGACGAGGAGGAAGAAGAAGCGGAGGAGCTGGGCCACACGGAGACCTACGCTGACTATGTGCCCTCCAAGTCCAAGATCGGGAAGCAGCATCCGGACCGAGTGGTGGAGACCAGCACTCTGTCCAGTGTCCCCCCACCGGACATTACCTACACCCTCGCATTGCCCACCTCGGACAGCGTGGCCCTGTCTGCCCTGCAGCTGGAGGCCATCACCTATGCCTGCCAGCAACACGAGATCTTGCTGCCCAGTGGTCAGCGCGCGGGTTTCCTCATCGGCGATGGGGCCGGCGTCGGCAAGGGCCGCACGGTGGCCGGTATCATCGTAGAGAACTACATACGCGGCAGAAAGAAGGCCCTGTGGTTCAGCGTCTCCAATGACCTCAAGTACGATGCAGAGCGCGACCTGCGGGACATTGAGGCCCCGGGCATCGCAGTGCATGCGCTGAGCAAGATCAAGTACGGCGACAACACTACCTCAGAGGGCGTCCTCTTCGCCACTTACTCAGCCCTGATCGGGGAGAGCCAGGCAGGCGGGCAGCACCGCACGCGCCTGCGGCAGATCCTCCAGTGGTGCGGGGAAGCCTTCGATGGCGTCATCGTGTTTGATGAGTGCCACAAAGCCAAGAATGCCAGCTCCACCAAAATGGGCAAGGCCGTGCTGGACCTGCAGACCAAGCTGCCCCTGGCCAGGGTGGTCTATGCCAGCGCTACAGGTGCCTCTGAGCCCCGGAACATGATCTACATGAGCCGCCTGGGCATCTGGGGTGAGGGCACACCCTTCCGGACATTCGAGGAGTTCCTACACAACATCGAGAAGAGGGGTGTGGGTGCCATGGAGATCGTGGCCATGGACATGAAGGTCAGCGGCATGTACATTGCACGCCAGCTCAGTTTCTCCGGAGTCACCTTCCGTATCGAGGAGATCCCGCTACCCCCAGACTTTGAGCGTGTTTACAACCGGGCAGCGCTGCTGTGGGCCGAGGCCCTGGGCGTGTTCCAGCAGGCGGCTGACTGGATTGGCCTGGAGTCTCGCAAGTCCCTGTGGGGCCAGTTCTGGTCGGCCCACCAGCGCTTCTTCAAATACCTGTGCATTGCTGCCAAGGTACACCGGCTGGTGGAGCTGGCCCGAGAGGAGCTGGCCTGCAACAAGTGCGTGGTCATCGGGCTGCAGTCCACAGGCGAGGCGCGGACGCGGGAGGTGCTGGACGAGAACGAGGGGCGCCTCGACTGCTTCGTTTCAGCTGCCGAAGGCGTCTTCCTGTCGCTAATCCAGAAGCACTTTCCTTCCACCAAAAGGAAGCGGGACAGAGGAGCCGGCAGTAAGAGGAGGCGGCGGCCTCGAGGCCGAGGGACCAAGGTACCTAGACTGGCACTTGAGGGGACAGGTGTGATCCGCATCAGTGATGACAGCAGCACCGAATCAGATGCTGGCCTGGACAGCGACTTCAACTCTTCCCCTGAGTCCTTGGTGGATGACGATGTGGTCATCGTGGAGGCCTCGGGGCATCCTGTGGACGACCGGGGCCCCCTGTGCCTCCCACAGAGGGACCTGCACGGCCCCGCTGTCCTGGAGTGCGTGGAGCGCCTGAAGCAGGACCTGCTGGCTAAGGTGCGGGCACTGGGCCGAGAGCTGCCTGTCAACACCCTGGACCAGCTCATCGACCAGCTCGGAGGCCCTGAGCATGTGGCCGAGATGACGGGCAGGAAAGGGCGCGTGGTGTCCAGGCCCGATGGGACGGTGACCTTCGAGTCTCGGGCAGAGCAGGGCCTGTCCATCGACCACGTGAACCTCAGGGAGAAGCAGCGGTTCATGAGCGGCGAGAAGCTCGTGGCCATCATCTCCGAGGCCTCCAGCTCCGGTGTCTCCCTGCAAGCTGACCGCCGCGTGCAGAACCAGCGCCGCCGTGTGCACATGACCCTGGAGCTGCCCTGGAGCGCCGACCGTGCCATCCAGCAGTTCGGACGCACGCACCGCTCCAACCAGGTGTCAGCACCTGAGTACATCTTCCTCATCTCTGAGCTGGCAGGGGAGCGGCGCTTCGCCTCCATTGTCGCCAAGCGGCTGGAGAGCCTGGGCGCCCTGACGCATGGGGACCGCCGTGCCACTGAGTCCCGGGACCTCAGCAAATACAACTTCGAGAACAAGTACGGCACTCGGGCCCTCAGCTGCGTCCTCAGCACCATCCTGAGCCAGACAGAAAACAAAGTGCCGCTGCCCCAGGGCTACCCCGGAGGGGATGCCGCCTTCTTCCGGGACATGAAGCAGGGCCTGCTGTCGGTTGGCATCGGCGGGCGTGAGTCTCGGTCCGGCGGGCTGGATGTGGAGAAGGACTGCTCTATCACCAAGTTCCTGAACCGCATCCTGGGGCTGGAGGTCCACAAGCAGAATGCACTGTTCCAGTACTTCTCAGACACCTTCGACCACCTTATCGAGATGGATAAGAAGGAGGGCAGATATGACATGGGCATCCTGGACCTGGCCCCTGGAATTGATGAGATCTATGAGGAGAGCCAGCAGGTGTTCCTGGCCCCCGGGCACCCACAGGATGGACAGGTGGTCTTCTACACGATCACCGTGGACCGCGGCCTGAAATGGGAAGAGGCCTTTGCCAAGTCGCTGGGGCTCACTGGGCCCTATGATGGCTTCTACCTCTCCTACAAGGTGCGGGGCAACAAGCTGAGCTGCCTGCTGGCCGAGCAGGGCCGCGGCAAGCACTTCACAGTGTACAAGCCCAACATCGGCCGTCAGAGCCAGCCCGAGACACTGGACAGCCTGTGCCGCAAGTTCCAGCAGGTCACCGCAGAGGAAGCACAGGAGCACTGGGAGAGCAGCTATGCCTACTCGCTGACTCACTGCAGCCACATGGCTTGGAACCAGCACTGCCGGCTGACCCAGGAGGGCAAGGACTGCGTGCAGGGCCTGCGGCTGCGGCACCACTACGTGCTGTGCGGTGCGCTGCTGCGTGTGTGGGGCCGTGTGGCCTCGGTCATGGCGGACGTCAGCAGCAGCAGCTACCTGCAGATCGTGCGTCTCAAGACTAAGGACAAGAAGAAGCAAGTGGGCATCAAGATCCCCGAGGGCTGCGTGCGCCGCGTGCTGCAGGAGCTGCGGCAGATGGACACCGAGGTGCAACGCCGAAGCCGCCCCGCCCCGCCGCCCACCCCGCGGCTCCCACTCGCGCTCCCCTGCGGCCCAGGCGAGGTGCTGGACCTGACCTACAGCCCGCCAGCCGAGGCCTTTCCACCACCGCTGCTGCCGCCACAGTGCTTCGCCTTCCCGCCGCCCACCCCAGACCCGGGCGCGCTGCTGCTGGGTGCGCGTGACGCTGTGCCCGACCCTGCGGCCCTGGCCCACCAAGGCTGCGACATCAACTTCAAGGAGGTGCTGGAGGACATGCTGCGCTCCCTGCACGCGCCGCCCGCCGAGCCCCCCGGCCCGCTGATGGCGCCGGGCGCCGGGGGCCCAGAGCGGCAGAGCGTGATCCGCTTCAGCCCACCCTTCCCCAACTCCTAG

Related Sequences

XP_004866032.1 Protein

Sbno2 PREDICTED: protein strawberry notch homolog 2 isoform X1 [Heterocephalus glaber]

Length: 1353 aa      View alignments
>XP_004866032.1
MLAVGPAMDRECPQHEPPPAGILYSPTPLQNGLLHCPWWSSFSPPSYPGFSSDSHVFSSSASFLGGQPCPDASYATTATAPSYLSKSGTFPQDSYFEDLSNASIFSSSVDSLSDIVDTPDFLPADSLSQVPTIWDVSTASSTHDKLFLPGGPFPGLEDPVTSLPSTSLLVSYQSQSQPEDEVEDEEEEEAEELGHTETYADYVPSKSKIGKQHPDRVVETSTLSSVPPPDITYTLALPTSDSVALSALQLEAITYACQQHEILLPSGQRAGFLIGDGAGVGKGRTVAGIIVENYIRGRKKALWFSVSNDLKYDAERDLRDIEAPGIAVHALSKIKYGDNTTSEGVLFATYSALIGESQAGGQHRTRLRQILQWCGEAFDGVIVFDECHKAKNASSTKMGKAVLDLQTKLPLARVVYASATGASEPRNMIYMSRLGIWGEGTPFRTFEEFLHNIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVTFRIEEIPLPPDFERVYNRAALLWAEALGVFQQAADWIGLESRKSLWGQFWSAHQRFFKYLCIAAKVHRLVELAREELACNKCVVIGLQSTGEARTREVLDENEGRLDCFVSAAEGVFLSLIQKHFPSTKRKRDRGAGSKRRRRPRGRGTKVPRLALEGTGVIRISDDSSTESDAGLDSDFNSSPESLVDDDVVIVEASGHPVDDRGPLCLPQRDLHGPAVLECVERLKQDLLAKVRALGRELPVNTLDQLIDQLGGPEHVAEMTGRKGRVVSRPDGTVTFESRAEQGLSIDHVNLREKQRFMSGEKLVAIISEASSSGVSLQADRRVQNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTRALSCVLSTILSQTENKVPLPQGYPGGDAAFFRDMKQGLLSVGIGGRESRSGGLDVEKDCSITKFLNRILGLEVHKQNALFQYFSDTFDHLIEMDKKEGRYDMGILDLAPGIDEIYEESQQVFLAPGHPQDGQVVFYTITVDRGLKWEEAFAKSLGLTGPYDGFYLSYKVRGNKLSCLLAEQGRGKHFTVYKPNIGRQSQPETLDSLCRKFQQVTAEEAQEHWESSYAYSLTHCSHMAWNQHCRLTQEGKDCVQGLRLRHHYVLCGALLRVWGRVASVMADVSSSSYLQIVRLKTKDKKKQVGIKIPEGCVRRVLQELRQMDTEVQRRSRPAPPPTPRLPLALPCGPGEVLDLTYSPPAEAFPPPLLPPQCFAFPPPTPDPGALLLGARDAVPDPAALAHQGCDINFKEVLEDMLRSLHAPPAEPPGPLMAPGAGGPERQSVIRFSPPFPNS