Sequence details NCBI ID: XM_004840857.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rrbp1
Gene Name ribosome binding protein 1, transcript variant X2
Entrez Gene ID 101712445

Database interlinks

Part of NW_004624741.1 (Scaffold)

For more information consult the page for NW_004624741.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RRBP1 ENSCPOG00000022191 (Guinea pig)

Gene Details

ribosome binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019774, Guinea pig)

Protein Percentage 83.14%
CDS Percentage 85.53%
Ka/Ks Ratio 0.13496 (Ka = 0.0977, Ks = 0.7239)

RRBP1 ENSG00000125844 (Human)

Gene Details

ribosome binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000367038, Human)

Protein Percentage 85.32%
CDS Percentage 85.76%
Ka/Ks Ratio 0.11111 (Ka = 0.0795, Ks = 0.7153)

Rrbp1 ENSMUSG00000027422 (Mouse)

Gene Details

ribosome binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000016072, Mouse)

Protein Percentage 83.14%
CDS Percentage 83.07%
Ka/Ks Ratio 0.10151 (Ka = 0.0949, Ks = 0.9347)

Rrbp1 ENSRNOG00000005958 (Rat)

Gene Details

ribosome binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000052465, Rat)

Protein Percentage 83.35%
CDS Percentage 82.7%
Ka/Ks Ratio 0.09574 (Ka = 0.0955, Ks = 0.9971)

Genome Location

Sequence Coding sequence

Length: 2904 bp    Location: 18815577..18762436   Strand: -
Raw sequence   
>XM_004840857.1
ATGGATATCTACGACACGCAGACCTTGGGCGTCATGGTCTTTGGCGGCTTCATGGTGGTGTCTGCCATTGGCATCTTCCTGGTGTCCACCTTCTCCATGAAGGAAACGTCGTATGAAGAGGCCCTCGCCAACCAGCGCAAAGAAATGGCGAAAATTTACTACCAGAAAGTGGAAAAGAAAAAGAAGGAGAAAACCGTGGAGAAGAAAGGAAAGACCAAGAAAAAGGATGAGAAACCAAACGGGAAGATTCCTGACCATGACCTGGGCCCCAATGTCACCGTCCTCCTCAAAGAACCAACACGCACTCCTGCCTTGGCTGTGGCCCCAACCCCCATCCAGGCCCCCCTGGTCTTTACCCCTGTTGCTGCAGTACCAGCCATGCCCCAAGAGAAGCTGGGCTCCTCCCCAAAGGACAAAAAGAAGAAGGAGAAAAAAGTGGCCAAAGTTGAACCAGCAGTCAGCTCAGTAGTGAATTCCATCCAGGTTTTGGCCTCAAAGTCAGCCATCTTGGAAGCTGCTCCCAAGGAGAGTGCAAGTGCAGATGTAGTGCAGAGCCAGGAGGCGCCCAAGCTGGAGGCTCCTGCAAAGAAGAAGTCTGGTTCCAAGAAAAAGAGGCCCCCCGATGCCAACAGCCCTCTCTACCTACCCTACAAGACGCTGGTCTCCATGGTTGGAACCATGGCGTTCAATGAGGGTGAGGCCCAGCGGCTCATCGAGATCCTGTCTGAGAAGGCTGGTGTCATCCAGGACACCTGGCACAAGGCCACTCAGAAGGGAGACCCCGTGGTGATTCTGAAACGTCAGCTGGAAGAGAAGGAAAAACTGCTGGCCACAGAGCAGGAGGATGCGGCTGTAGCCAAGAGCAAACTGAGGGAACTCAACAAGGAGATGGCTGCGGAGAAGGCCAAGGCTGCTGCTGGGGAGGCCAAGGTGAAGAAGCAGCTGGTGGCTCGGGAGCAGGAGATTGCAGCAGTGCAGGCACGCATGCAGGCCAGCTACCGAGAGCACGTGAAGGAGGTGCAGCAGCTACAGGGCAAGATCCGGACTCTGCAGGAGCAGCTGGAGAATGGCCCCAACACCCAGCTAGCCCGACTACAGCAGGAGAACTCCATCCTGCGGGACGCCCTGAACCAGGCCACCAGCCAGGTGGAGAGCAAGCAGAACGCAGAGCTGGCGAAGCTGCGGCAGGAGCTGGGTAAGGCCAGCAAGGAGCTGATGGAGAAGGCGGAGGCGTCCCGGCAGGAGGAGCAGCAGCGCAAGGCCCTGGAAGCTAAGGCGGCCGCCTTTGAGAAGCAGGTGCTGCAGCTGCAGGTGTCCTACAGGGAGAGTGAGGAGGCTCTGCAGAAACGTCTGGATGAGCTTAGCCGGGAGTTGTGCCGCACTCAGAGCAGCCATGCCAGCCTGCGTGCCGATGCCGAGAAGGCCCAGGAGCAGCAGCAGCGGGTGGCAGAGCTGCACAGCAAGCTGCAGTCCTCCGAGGCAGAGGTGAAGAGCAAGTGTGAGGAGCTGCGGGGGCTCCATGGGCAGCTCCAGGAGGCCCGAGCAGAGAACACCCAGCTGGCTGAGCGCATGCACTCCATCGAGGCCCTGCTGGAGGCGGGCCAGACACGGGACACCCAGGCCAGCCAAGCTGAGGCAGAGCAGCAGCAGACCCGCCTCAAGGAGCTGGAGTCACAGGTGTCATGTCTGGAGAAGGAGGCCATTGAGCTCAGGGAGGCTGTGGAGCAGCAGAAAGGGAAGAATAATGACCTCCGGGAGAAGAACTGGAAGGCCATGGAGGCGCTGGCCTTGGCCGAGAGGACCTGTGCAGAGAAGCTGCAAACCCTGACACAGGCCAAGGAGGACTCAGAGAAGCAGCTCCACCTGACTGAGGCGCAGACCAGGGAGGCCCTGCTGGCCCTGCTCCCGGAACTCTCTGCCTTGGCACACCAGAGCTATGCCGAGTGGCTGCAGGAGCTCAGAGTGAGGGGCCCCGAGCTGCTGAAGATACCGTCGGAGCCCCCTCAGGACGTGACCTCCAAGCTGCGGGAGGCCGAGGAGGCCCAGAGCACTCTGCAGGCCGAGTGTGACCAGTACCGCGCCATCCTGGCTGAGACGGAGGGCATGCTCAAGGACCTGCAGAAGAGTGTAGAGGAGGAGGAGCAGGTGTGGAAGGCCAAGGTGGGCACCAAGGAGGAGGAACTGCAGAAGTCCCAGGTCACAGTGAAGCATCTCGAAGACACTATAGAGAAGCTCAAAGGAGAACTTGAAAGCTCAGATCAGGTGCGGAAGCACACCTTGCACTTGGAGGCAGAGCTGGAGAAGCACATGGCTGCCGCCAGCGCCGAGTGCCAGAGCTACGCCAAGGAGGTGGCAGGGCTGAGGCAGCTGCTGTTAGATTCTCAATCTCAGCTAGACGCAACGAAGAGTGAAGCCCAGAAGCAGAGCCAAGAGCTCGCCCTGGTCAGGCGGCAGTTGAGTGAGATGAAGAGCCATGTAGCAGATGGTGATGTGGCTGGATCCCCAGGAGTCCCCTCAGCCAAGCAGGACCCTGTGAAGCTGCAAGCACAGCTGGAGCGGATGGAGCTCGCCCTGGAGGAGGAGCAGGTGCAGCGGCAGAAGCTCACAGCTGAGTTTCAGGAGGCACGGAGCACGGTGTGCCAACTACAGGAAGAGCTGGAGATGCTGCGTGCCACTGGCCCCCCGGCATCTCTGGGCACTGAGGAGGTTGCACAGCTGAAGGAGAGACTAGAGAAAGAGAAGAAGTTAACAAGTGACCTGGGTCGTGCCGCCAGCAAACTGCAGGAGCTTCTGAAGACCACCCAGGAGCAGCTGGCAGAGGAGAAGGACAAGGTGAAGCAGCTGCAAGAACAGCTGGAAAAAGTGGAGGATGGCAGTGGTCCGAAAGAGGGCACCTCCGTCTGA

Related Sequences

XP_004840914.1 Protein

Rrbp1 PREDICTED: ribosome-binding protein 1 isoform X2 [Heterocephalus glaber]

Length: 967 aa      View alignments
>XP_004840914.1
MDIYDTQTLGVMVFGGFMVVSAIGIFLVSTFSMKETSYEEALANQRKEMAKIYYQKVEKKKKEKTVEKKGKTKKKDEKPNGKIPDHDLGPNVTVLLKEPTRTPALAVAPTPIQAPLVFTPVAAVPAMPQEKLGSSPKDKKKKEKKVAKVEPAVSSVVNSIQVLASKSAILEAAPKESASADVVQSQEAPKLEAPAKKKSGSKKKRPPDANSPLYLPYKTLVSMVGTMAFNEGEAQRLIEILSEKAGVIQDTWHKATQKGDPVVILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMAAEKAKAAAGEAKVKKQLVAREQEIAAVQARMQASYREHVKEVQQLQGKIRTLQEQLENGPNTQLARLQQENSILRDALNQATSQVESKQNAELAKLRQELGKASKELMEKAEASRQEEQQRKALEAKAAAFEKQVLQLQVSYRESEEALQKRLDELSRELCRTQSSHASLRADAEKAQEQQQRVAELHSKLQSSEAEVKSKCEELRGLHGQLQEARAENTQLAERMHSIEALLEAGQTRDTQASQAEAEQQQTRLKELESQVSCLEKEAIELREAVEQQKGKNNDLREKNWKAMEALALAERTCAEKLQTLTQAKEDSEKQLHLTEAQTREALLALLPELSALAHQSYAEWLQELRVRGPELLKIPSEPPQDVTSKLREAEEAQSTLQAECDQYRAILAETEGMLKDLQKSVEEEEQVWKAKVGTKEEELQKSQVTVKHLEDTIEKLKGELESSDQVRKHTLHLEAELEKHMAAASAECQSYAKEVAGLRQLLLDSQSQLDATKSEAQKQSQELALVRRQLSEMKSHVADGDVAGSPGVPSAKQDPVKLQAQLERMELALEEEQVQRQKLTAEFQEARSTVCQLQEELEMLRATGPPASLGTEEVAQLKERLEKEKKLTSDLGRAASKLQELLKTTQEQLAEEKDKVKQLQEQLEKVEDGSGPKEGTSV