Details from NCBI annotation

Gene Symbol Fyco1
Gene Name FYVE and coiled-coil domain containing 1, transcript variant X2
Entrez Gene ID 101726184

Database interlinks

Part of NW_004624730.1 (Scaffold)

For more information consult the page for NW_004624730.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FYCO1 ENSCPOG00000008105 (Guinea pig)

Gene Details

FYVE and coiled-coil domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007288, Guinea pig)

Protein Percentage 84.78%
CDS Percentage 87.97%
Ka/Ks Ratio 0.13216 (Ka = 0.0755, Ks = 0.571)

FYCO1 ENSG00000163820 (Human)

Gene Details

FYVE and coiled-coil domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000296137, Human)

Protein Percentage 79.76%
CDS Percentage 81.87%
Ka/Ks Ratio 0.10425 (Ka = 0.114, Ks = 1.094)

Fyco1 ENSMUSG00000025241 (Mouse)

Gene Details

FYVE and coiled-coil domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133222, Mouse)

Protein Percentage 74.79%
CDS Percentage 76.37%
Ka/Ks Ratio 0.08979 (Ka = 0.1576, Ks = 1.7553)

Fyco1 ENSRNOG00000006336 (Rat)

Gene Details

FYVE and coiled-coil domain containing 1 (Fyco1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008630, Rat)

Protein Percentage 75.79%
CDS Percentage 77.02%
Ka/Ks Ratio 0.09185 (Ka = 0.1493, Ks = 1.6256)

Genome Location

Sequence Coding sequence

Length: 4335 bp    Location: 74928465..74982882   Strand: +
>XM_004835036.1
ATGGCCGCCAGCAGTGCCGAGGGCCAGCTGCAGAGGATCATCCGCGACCTGCAAGATGCGGTGACGGAACTGAGCAATGAGTTTAAGGAAGCGGGAGAGCCCATCACTGACGACAGCCCCAGCTTACACAAGTTCTCCTACAAACTTGAGTACCTGCTGCAGTTCGACCTGAAGGAGAAGGCCAGCCTCTTGGGCACCAGAAAGGACTACTGGGACTACCTCTGCGCCTGCCTGGCCAAGGTGAAGGGCGCCAGCGATGGGATCCGCTTTGTCAAGTCCATCTCGGAGCTCCGGACATCTCTGGGGAAAGGAAGAGCCTTCATCCGCTACTCCCTGGTGCACCAGAGGCTGGCAGACACCTTGCAGCAGTGCTTCATGAACACCAAGGTCACCAGCGACTGGTACTATGCGAGAAGCCCCTTTCTGAAGCTAAAGTTGAGCTCTGACATCGTGGGCCAGCTCTACGAGCTGACCGAGGTGCAGTTTGACCTGGCATCGAGGGGCCACGATTTGGATGCCGCTTGGCCGACATTTGCCAGGAGGACTCTGGCCCCCGGCTCCCCTGCCTACCTGTGGAAGGCCCCCAGCCGGAGCTCCAGCATGAGCAGCTTGGTGAGCAGCTACTTGCAGACCCAGGAGATGGCGTCCAACTTCGACCTGAGCAGTCCTCTGAACAACGAGGCACTGGAGGGCTTCGACGAGATGCGGCTGGAGCTGGACCAGCTGGAGGTGCGGGAGAAGCAGCTGCAGGAGCGCGTGCAGCAGCTGGAACAGGAGAAGCAGGAGCTGCAGGCAGCACTCAGCACACAGCAGGAGCAGCTGCAGGTGGAGAAGCAGCGTGGGCACGCTGCCACAGAGGACCACCGCCACCTCGTGGGCCTGCTGGCTGAGCTGCAGAAGCAGTGGGAGGTCACCCAGGCCACGCAGGATACCATCAAGGAGCTGCAGATGTGCCTACAGGCCCTAGAGCGAGATACAGCCAAGGAGGAGGACAGCTCCACCCTGCAGCACCTTGGGGCCATGCTGCAGCCCCTGGCGCGGGAGCTCAAGGCTGCCTGGGACTCCCTGGGCGAGAAGAACCAGCTTCTCTCCAGCCTCTCAGACAGCCTAGCCAGGGCTGAGCAGAGGGCAGACACGGCCTTGGACACAAAGGGGCAGCAAGGGCCCATCCCAGCCGACTCGGCCCTGAAGCTCCAGGAGCTGGGGGCGAAGCTCCAATCCCTGGAAGCAGAGAACTCCAAGGTCCAAGAGTTCAACAGGCAGCAGAGTGCACAGCTGGCCACTGAGCTGCAGCTGAAGGAAGAGGCCCGGGCTGGCCTGGAGCACCAGGTGCAGGAGGTGGCACAGCTCCGAAAAGAGCTGTCCAGGAAGGAGCAGGAGGCAGCCCAGCTCCAGCAGCAGCTGCAGGAGTCGCTCGCCCGCTCGAGCTCACTGGAGGAGCAGCTGGCAGGGCTGAGGCGGGAGGAGCAGCTGCAACAGGAGGAGAAGGAGATGTTGGCACAGGAGGCCCGGTCCCTCAGCCGGCAGCTGCAAGTCCTGGAGACCCAGCTGGCACAGGTGAGCCAGCACGTGGGTGACCTTGAGGAGCAGAAGAAGCAGCTCATCCAGGACAAGGACCGTCTCAGCCAGAAAGTGGGTGCTCTGGAGCAGCTCGCTGAGCAGGCAGCCCCAGAGCCTTCTGTGGCCAGTGAGTGGGGTGAGGCCCCGGCCTCCCCAGTCTCCACCCTGCAGCAGGCCGGCGAGAAGCCAGCAGAGGGGCAAAGGGATAGTACTGAGGTGCAGGAGCCCAAACAGGAGGAGGAGGACCTACGCCAGGCCAACTGGGAGCTGCAGAGGGAGCTGCAGAGCATGGCTGGGCGCAACCAGCTCCTGGAAGGCAAGCTGCAGGCCCTGCAGGCTGATTACCAGGCGCTGCAGCAGCGGGAGGCGGCCATCCGGGGCTCCCTGGCCTCCCTGGAGGCAGAGCAGGCCAGCATCCGGCACCTGGGTGACCAGATGGAGGCGAGCCTGCTGGCCGTGCAGAAGGCCAAGCAGACCATGAAGGCGCAGGTGGCCAAGAAGGAAGCCGCTCTGCAGAGCAAGGAGGACGAGTGCCGGCAGCTGCGGGAGGAGGTAGCGCAGTGCCGGCAGGTGGCAGAGTCCCGGGACAAAGATCTCAGGGTCCTCTCGGAGGAGTGCCACCACCAGGCCCAGCTGATCGATGCCCTCAAGGCGGAGAAGGGCCAGCAGGGGCTCGGCCCACCCCAAGATGGGACCACGCAGCTGGCCCTGGCCCAGGCCCAGCTTGAAGTCCATCAGGGGGAGGCCGAGCGGCTGCGGGCTGAGCTGGTAGACCTGCAGGCGAAGCTCTGGGCAGCCCTGGGCGACCAGGACAAGGTGCAGAGCCAGCTGAGTGTGGCCGAGGAGATGCTGAGGGAGCACAGGACCCTGGTTCAGCAGCTGCAGGAGCAAAACGAGGCCCTCAACAGGGCCCATGTCCAGGAGCTGCTGCAGGAGGGCAGGGCCTCTGCGGCCCAGCAGCGCAGGCAGGAGCTTCGGGCCCTGCAGGAGGAGCTGGCCCAGGCCACACGCAGCTCCGAAGAGGCCCGGCTGGAGCACGCTGAGCTGCAGGAGCAGCTGCACCGGGCCAACACAGACACCGCAGAGCTGGGCATCCAGGTGTGCACCCTGACTGCGGAGAAGGAACGTGTGGAGGGGGAGCTCCGCATCTGCCGAGAGGCCGCTTCCCAAGAGCGAGAGGGCCTGGAGCGCCAAGTGGCAGGGCTGCTGCAGGAGAAGGCGAGCCTACAGGAGAAGCTGACGGCAGCCGAGAACGCCGCTGGCTCCCTGGCCAGCCTGCAGGCCCAGCTGGCCCAGGCCGAGCAGCGGGCGCAGAGCCTCGAGGAGGCCAAGCACCAGGAGCACGACGCCCTCAAATTCCAGCTGAGTGCCGAGATCATGGACCACCAGAGCCGGCTGAAGGCTGCCACTGAAGAGTGCAGGAGCCTCAGGGCCCAGCTTGAGCAGCAAGGCCAACAGCTACGGGCCACCGAAGAGGCCGTGGGCAAGCTGAAGGCCACCCAGGCGGACATGGGAGAGAAGCTGAGCTGCACCAGCAGCCGTCTTTCCGAGTGCCAGGCTGCCGTGGTCCAGAAGGACAAGGAGGGCTCGGCCCTGCGGGAGAGCCTGGAACGGACCCAGAAGGAACTGGAGATCGCCACCACCAGAAGCCAAGAGTACTGCAACAGACTCCGCCAGGAGGTGAGCGAGCGGGAGCGGAGCGACCAGAAGATGCTGGCAGACCTGGACGACCTGCACAGAACCAAGAAGTACCTGGAGGAGCGCCTGATAGAGCTGCTCAGGGACAAGGACGCGCTGTGGCAGAAGTCGGACGCCCTGGAGTTCCAGCAGAAGCTCAGCTCCGAGGAGCGGTGGCTGGGGGACGCGGAGGCGAGCCACTGCCTGGACTGCAAGCGGGAGTTCAGCTGGATGGTTCGACGGCACCACTGCAGGGTGTGCGGCCACGTCTTCTGCTACTACTGCTGCAACAACTATGTGCTGACGAAGCCCAGCGGCAGGAAGGAGCGCTGCTGCCGGGCCTGTTTCCGGAAGTTCAGTGAAGGCCCAGGCTCCCCCAACAGCTCTGGCTCAGCCACCAGCCAAGGAGAGCCCAGCCCCAGGCTGTCCCCGGCCCACGCTGGGCCCCAGGCCGTAGGAAGCCAAGGAGCTGACTGCAGGCAGCCGGATGACGCCGTGTTCGACATCATCACGGACGAGGAGTTGTGCCAGATCCAGGAGTCCGGCTCCTCTTTGCCAGCGACGCCCACGGAAACTGATTCCCTGGACCCAAGCATGGCCGAACAGGACACCACCTCAAACTCGCTGACCCCCGAGGACACTGAGGACATGCCCGTGGGGCAGGACGCTGAAATCTGCCTGCTGAAGTCCGGGGAGCTGATGATCAAGGTGCCCCTGACCGTGGACGAGATCGCCAGCTTTGGAGAGGGCAGCCGGGAGCTGTTCGTGCGCTCCAGCACCTACAGCCTGATCCCCATCACCGTGGCCGAGCCGGGCCTCACCATCAGCTGGGTCTTCTCCTCTGACCCCAAGAGCATCTCCTTCAGCGTGGTCTTCAGGGAGGCGGAGGACGCGCCCCTGGATCAGTGCAAGGTCCTCATCCCCACGACCCGGTGCCACTCCCACAAGGAGAGCATCCAGGGCCAGCTGAAGGTGCGCACGCCCGGCATCTACATGCTCATCTTCGACAACACCTTCTCCAGGTTCATCTCCAAGAAAGTGTTTTACCACTTGACGGTTGACCGGCCTGTGATCTACGACGGCAGTGACTTCCCCTAG

Related Sequences

XP_004835093.1 Protein

Fyco1 PREDICTED: FYVE and coiled-coil domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 1444 aa      View alignments
>XP_004835093.1
MAASSAEGQLQRIIRDLQDAVTELSNEFKEAGEPITDDSPSLHKFSYKLEYLLQFDLKEKASLLGTRKDYWDYLCACLAKVKGASDGIRFVKSISELRTSLGKGRAFIRYSLVHQRLADTLQQCFMNTKVTSDWYYARSPFLKLKLSSDIVGQLYELTEVQFDLASRGHDLDAAWPTFARRTLAPGSPAYLWKAPSRSSSMSSLVSSYLQTQEMASNFDLSSPLNNEALEGFDEMRLELDQLEVREKQLQERVQQLEQEKQELQAALSTQQEQLQVEKQRGHAATEDHRHLVGLLAELQKQWEVTQATQDTIKELQMCLQALERDTAKEEDSSTLQHLGAMLQPLARELKAAWDSLGEKNQLLSSLSDSLARAEQRADTALDTKGQQGPIPADSALKLQELGAKLQSLEAENSKVQEFNRQQSAQLATELQLKEEARAGLEHQVQEVAQLRKELSRKEQEAAQLQQQLQESLARSSSLEEQLAGLRREEQLQQEEKEMLAQEARSLSRQLQVLETQLAQVSQHVGDLEEQKKQLIQDKDRLSQKVGALEQLAEQAAPEPSVASEWGEAPASPVSTLQQAGEKPAEGQRDSTEVQEPKQEEEDLRQANWELQRELQSMAGRNQLLEGKLQALQADYQALQQREAAIRGSLASLEAEQASIRHLGDQMEASLLAVQKAKQTMKAQVAKKEAALQSKEDECRQLREEVAQCRQVAESRDKDLRVLSEECHHQAQLIDALKAEKGQQGLGPPQDGTTQLALAQAQLEVHQGEAERLRAELVDLQAKLWAALGDQDKVQSQLSVAEEMLREHRTLVQQLQEQNEALNRAHVQELLQEGRASAAQQRRQELRALQEELAQATRSSEEARLEHAELQEQLHRANTDTAELGIQVCTLTAEKERVEGELRICREAASQEREGLERQVAGLLQEKASLQEKLTAAENAAGSLASLQAQLAQAEQRAQSLEEAKHQEHDALKFQLSAEIMDHQSRLKAATEECRSLRAQLEQQGQQLRATEEAVGKLKATQADMGEKLSCTSSRLSECQAAVVQKDKEGSALRESLERTQKELEIATTRSQEYCNRLRQEVSERERSDQKMLADLDDLHRTKKYLEERLIELLRDKDALWQKSDALEFQQKLSSEERWLGDAEASHCLDCKREFSWMVRRHHCRVCGHVFCYYCCNNYVLTKPSGRKERCCRACFRKFSEGPGSPNSSGSATSQGEPSPRLSPAHAGPQAVGSQGADCRQPDDAVFDIITDEELCQIQESGSSLPATPTETDSLDPSMAEQDTTSNSLTPEDTEDMPVGQDAEICLLKSGELMIKVPLTVDEIASFGEGSRELFVRSSTYSLIPITVAEPGLTISWVFSSDPKSISFSVVFREAEDAPLDQCKVLIPTTRCHSHKESIQGQLKVRTPGIYMLIFDNTFSRFISKKVFYHLTVDRPVIYDGSDFP