Sequence detailsNCBI ID: XM_004874765.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Ninl
Gene Name ninein-like, transcript variant X2
Entrez Gene ID 101715016

Database interlinks

Part of NW_004624939.1 (SequenceType object (1))

For more information consult the page for NW_004624939.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NINLENSCPOG00000005041 (Guinea pig)

Gene Details

ninein-like

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000004536, Guinea pig)

Protein Percentage 76.68%
CDS Percentage 83.52%
Ka/Ks Ratio 0.33734 (Ka = 0.1466, Ks = 0.4346)

NINLENSG00000101004 (Human)

Gene Details

ninein-like

External Links

Gene Match(Ensembl Protein ID:ENSP00000278886, Human)

Protein Percentage 60.66%
CDS Percentage 71.17%
Ka/Ks Ratio 0.27263 (Ka = 0.3019, Ks = 1.1075)

NinlENSMUSG00000068115 (Mouse)

Gene Details

ninein-like

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000105522, Mouse)

Protein Percentage 62.53%
CDS Percentage 72.08%
Ka/Ks Ratio 0.22959 (Ka = 0.2724, Ks = 1.1863)

NinlENSRNOG00000027747 (Rat)

Gene Details

Protein Ninl

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000061689, Rat)

Protein Percentage 63.27%
CDS Percentage 72.36%
Ka/Ks Ratio 0.21696 (Ka = 0.2646, Ks = 1.2196)

Genome Location

Sequence SequenceType object (2)

Length: 3777 bp    Location: 65119..171095   Strand: +
Raw sequence   
>XM_004874765.1
ATGGATGAAGAAGATAATCACTATATCTCACAGCTCAAGGATGTCTACAACAGTTGTGACAGCACAGGCACAGGCTTTCTGGATCAGGAGGAGCTGACTGAACTCTGCCGGAAGCTCCACCTGGAGAAGCAACTGCCTGCCCTCCTGCAGACTCTGCTTGGAGATGACCACATTGCCAGGGTCAACTTTGAGGAGTTTAAGGAAGGGCTTGTGACAGTGCTGTCCTCCAAGGCTGGTGGCAACCCCATCAGTGAAGAAGCTGGTTCTTTGCAGTCAGCTGCCTCCTATACTGTCCCACCAAAATATGTGAGTGGCTCCAAGTGGTACGGCCGTTGGAGCCAGCCAGAGCAGAGGGCCTCTGCCACCAAAGCCAGATGTGGACCAGAGCAGCAGGCAAGGGCTGGCCTGAAGAGCCAGCTCCACCACTCCATGTCCCTGGAGAGTGTGGAGAGTCTCAAGTCCAATGAGGAAGCTGAGAGTCCTAGAGAACCTCAGGATGAGCTGTTCGAAGCCCAAGGGCAGCTGCAAACCTGGGGCTCTGAGGTCTTTGGGAGCCCCCAGAAGTCTTGTAGCCCTTTGTATGCCTCATCTGAGAGCCAGGTTCAGGACATCTGGGAGCAGCTGGGCGTTGGCAGTCGTGGCCACCTGGATGAGCAGGAGCTGGCTGTGGTCTGCCAGAGCATCGGGCTCCACGGACTCGAGAAGGAGGAGCTCAAAGACCTGTTCCACAAACTGGACCAAGATGGTGATGGCAGAGTGAGTCTCGAAGAGTTCCAGCTTGGCCTGTGCAGCCACAAACCCTCGCAGATTCCAGAATCTTCTACCCTAGTCAAACCAAGCAGGCCCTGGTCCCATTGCCAGGGGCAGGTCCCAGAGGAGAGCGGGTGTCACACGGCCACCACCACCTCCTCCCTCGTGTCCATGAGCTGTGGCCTGCGCCTCTTCTCCAGCATCGACGATGGCAGCGGATTCTCCCTTCCAGAGCAGGTCATCGCCACCTGGGCCCAGGAGGGCATCCACAGTGGCCGGGAGATCCTGCAGAGCCTGGACTTCAGCCTGGATGAGAAGGTCGACCTCCTGGAGCTAACCTGGGCCTTAGACAACGAGCTCCTGACAGTCGACAGTGTCATCCAGCAGGCAGCCCTGGCCTGCTACCGCCAGGAGCTCAGCTACCACCAAGAGCAGGTGGAACAGCTGGTGCAGGAACGAGACAAGGCCAGACAGGATCTGGAGCGGGCTGAGAGGAGGAGCCTGGAGCTCGTGAGGGAGATGGATGACAGCCACACCACCCTGGAGCAGCTCACGGAGCAGAAGATAGTGTGCCTGGAGCAGGACTACCGAGGAAGGCTGAACCTCCTGAGGGCAGAGGTGGAGGCGGAGCGGGAGCTGATCTGGGAGCAGGCTTGTAGGCAGAGTGCCATGCTGGAGCAGGACCTGGGCCACCTGCGGGCCGAGGAGGCCAGCCTGCGCCACAGATTGGGGCTGGCTTCGAAGGAAAATAGCCGGTTACAGCAGGAGATCCTGGAAGTGGTGGGAAAGCTTTCGGATTCAGAGAAGTTGGTCCTGAAACTGCAGGGCGACCTGGAGTTCATGCTGAGGGAAAAGCTGGAGACACAGGGCATGGAGCTCCAGGCCCAGGAGGAACAGTCTGCAGCTGTCTTGAAGGAATACGAGCTCAAGTGCCGGGACCTGCAGGACCAGAACGATGAGCTGCAGGCTGAGTTGGAGAGCCTGCAGGCGCGACTACCCCAGAGTCAGAGTTGGCAATGCCCTGCTGGGGACGCTGGACACCACCCAGCAGGTGTATACGTGGACGACTCCAGTCCAGTGAGTCTAGAAACGGAGATCTTGGTGGAGCAGATGCGGGAGCACTGCCAGGAGCTCAGGACCCAGCTGGAGGCCAAGGTAAATTCCTATGAGCGGGAAATCGAGGCCATGAAGAACAACTTTGAGAAGGAGAGGATGGAGCTAGAGCAGGCGCGGCAGCAGGAGGTCACAGTGCTGGAAGCCCGGAGAGCGGACCTGGAGGTGCTGTGCGCTACGTCGCAGGAGGTCATCCTGGGCCTGCGGGAGCAGCTGCGAGCCGCTGCAGGTGGCCCTGAGGCCTCATGGGCCGCAATGACTTCCTGCTGCGCACCGGTGCTCTGTGACCTGGCCCAGCAGCTGGACAAACACATGTGGCAGCAGCACCAGGGCGAGCTGCGGCAGATCAGGCAGGAGGCAGCAGAGGAGCTGAGCCGGATGCTGTCTCAGCATGACATACACTGCAAGAGCCTGGTGCTGCGGCACCAGCTCGAGAAGGACCGGCTACAGCAGGTCCACCTGCGGCGGGAGGAGGAGGTACTCGTGCGCTGCCAGGAGCAGCAGCAGAGGCTGCAGGTGGCCCTGGGTGAGGAGCAGGCACAAATGTGCAGGTCCTTCGCCCTGGAGAGGAAGAGGCTGGAGCGTGCCCACCGCGAGCAGGTGGGGAGCCTGGTCCAGGAGGCAGAGGCACTGCGGGTCCTGCTGCAAGGCGGAGCTGCAGCAACCACGGACAAGGAGCAGCAGGGGGCACCCATACCCATGTCCCCATGCCTAGACATCCATGGAGGAACGTGGGAGCCAGTGGGAGATGGGCCTGGCCAGCCCTGCTGTACAGATGCTGTGTCCAGAGGGCTGCCAGAGAGCCTTGACCATGAACAGAGCTGCTGGGGTCTGATGGATGCAGAGGAGACAGCTTCTGTCCCCTTTGAGAAGGGGCCACCCATACAGGCACCTGGGCAGAACAAGGGGGCTGATCCTGAGGAGCCAGCACCTTCTGCAAGGGCCACAGTGAGCCCAAGCTGGCCTGATGTCCAGGAGCTGCCCTCGCGGGGTACAGGAGAAGATGGTGCCCTGCAGACCTGGCTCCAGCACCACTCAGGTCCTGGGACCACACCTGAGTTCCCAAACCCAGCAGGGGAAACTGAAGCAGATATGGTGGAGAGAGAGAAGAATGACATGAAAACCAAACTTCTGCAGCTGGAAGATGTTGTCCGGGCTCTCAAGAGAGAAGCAGATTCTAGAGAGAATGACAGGGAGGAGCTTCAGAGGCTTTCTGAAGAAAACGGTTTGTTGAAAAATGATCTGGAGAGGATTCAGCAGAAACTTGGAGCTGCAGAGCACATGAGTGACATGCAGAGGCAGGAGATTGAGGCTCTGAAGAGAGACAAGGAGAAGGTCTGCTTTGAAATGGACGAGCAGCTCAGCATCCAGAATCTGAAATACAAGAATGAAGTATCACAGCTCAACTGCAGGGTCCTTCAGCTGGAAGGGGTCACTTCCACCCATCAGGCCCAAAATGAGGAGAACCTGGCAGCTGCTCAACTATTAACACAGAGGCTGGAGGAAGTGGGGCGCCGAGAGGAGCAGCAGTGTGCCCAGATCCAGAAGCTTGAAACTGAACTTGAGCACATGAGTCAGCAATGTCAGCGCCTGAAACTGGTACGGTCAGAGCTGACAGAGAGCCGTGAGGAAGGCCAGGACCAGGAGGAGCAGGAGCAGCTGGATACCAGGGCAGGGCCAGCAGTAGAGGTGGAGCTGCTCCTTCGGGAGAAGCTGGACCAGTTGGAAAAGACCACTAGATCCGGCCTGCTGCTCAAGGAGCTCTATGTGGAAAATGCTCACCTCACAAAGGCTCTTCAAGTTGCTGAGCAGAAGCAGTGGGGTGCTGAGAAGCAAAAGCGCATCTTGGAGGAGAAAGTTCGAGCTCTCAACACACTGATCAGCAAGCTTGCACCTGCGGCTCTCTCTGTGTAG

Related Sequences

XP_004874822.1 SequenceType object (4)

Ninl PREDICTED: ninein-like protein isoform X2 [Heterocephalus glaber]

Length: 1258 aa      View alignments
>XP_004874822.1
MDEEDNHYISQLKDVYNSCDSTGTGFLDQEELTELCRKLHLEKQLPALLQTLLGDDHIARVNFEEFKEGLVTVLSSKAGGNPISEEAGSLQSAASYTVPPKYVSGSKWYGRWSQPEQRASATKARCGPEQQARAGLKSQLHHSMSLESVESLKSNEEAESPREPQDELFEAQGQLQTWGSEVFGSPQKSCSPLYASSESQVQDIWEQLGVGSRGHLDEQELAVVCQSIGLHGLEKEELKDLFHKLDQDGDGRVSLEEFQLGLCSHKPSQIPESSTLVKPSRPWSHCQGQVPEESGCHTATTTSSLVSMSCGLRLFSSIDDGSGFSLPEQVIATWAQEGIHSGREILQSLDFSLDEKVDLLELTWALDNELLTVDSVIQQAALACYRQELSYHQEQVEQLVQERDKARQDLERAERRSLELVREMDDSHTTLEQLTEQKIVCLEQDYRGRLNLLRAEVEAERELIWEQACRQSAMLEQDLGHLRAEEASLRHRLGLASKENSRLQQEILEVVGKLSDSEKLVLKLQGDLEFMLREKLETQGMELQAQEEQSAAVLKEYELKCRDLQDQNDELQAELESLQARLPQSQSWQCPAGDAGHHPAGVYVDDSSPVSLETEILVEQMREHCQELRTQLEAKVNSYEREIEAMKNNFEKERMELEQARQQEVTVLEARRADLEVLCATSQEVILGLREQLRAAAGGPEASWAAMTSCCAPVLCDLAQQLDKHMWQQHQGELRQIRQEAAEELSRMLSQHDIHCKSLVLRHQLEKDRLQQVHLRREEEVLVRCQEQQQRLQVALGEEQAQMCRSFALERKRLERAHREQVGSLVQEAEALRVLLQGGAAATTDKEQQGAPIPMSPCLDIHGGTWEPVGDGPGQPCCTDAVSRGLPESLDHEQSCWGLMDAEETASVPFEKGPPIQAPGQNKGADPEEPAPSARATVSPSWPDVQELPSRGTGEDGALQTWLQHHSGPGTTPEFPNPAGETEADMVEREKNDMKTKLLQLEDVVRALKREADSRENDREELQRLSEENGLLKNDLERIQQKLGAAEHMSDMQRQEIEALKRDKEKVCFEMDEQLSIQNLKYKNEVSQLNCRVLQLEGVTSTHQAQNEENLAAAQLLTQRLEEVGRREEQQCAQIQKLETELEHMSQQCQRLKLVRSELTESREEGQDQEEQEQLDTRAGPAVEVELLLREKLDQLEKTTRSGLLLKELYVENAHLTKALQVAEQKQWGAEKQKRILEEKVRALNTLISKLAPAALSV