Details from NCBI annotation

Gene Symbol Ercc6
Gene Name excision repair cross-complementing rodent repair deficiency, complementation group 6, transcript variant X3
Entrez Gene ID 101712293

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624928.1 (Scaffold)

For more information consult the page for NW_004624928.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ERCC6 ENSCPOG00000009484 (Guinea pig)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008513, Guinea pig)

Protein Percentage 80.64%
CDS Percentage 83.79%
Ka/Ks Ratio 0.22905 (Ka = 0.1105, Ks = 0.4822)

ERCC6 ENSG00000225830 (Human)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000348089, Human)

Protein Percentage 79.49%
CDS Percentage 82.53%
Ka/Ks Ratio 0.24635 (Ka = 0.123, Ks = 0.4992)

Ercc6 ENSMUSG00000054051 (Mouse)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066256, Mouse)

Protein Percentage 76.61%
CDS Percentage 79.4%
Ka/Ks Ratio 0.22651 (Ka = 0.1479, Ks = 0.6531)

Ercc6 ENSRNOG00000030017 (Rat)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6 (Ercc6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063005, Rat)

Protein Percentage 76.82%
CDS Percentage 79.19%
Ka/Ks Ratio 0.22353 (Ka = 0.1481, Ks = 0.6624)

Genome Location

Sequence Coding sequence

Length: 4446 bp    Location: 459005..533293   Strand: +
>XM_004874530.1
ATGCCAAGTGAAGGGAGCCGCCACTCCTGTCAAACTCAGGAGCAGGAGCATTCACAGAGTCCGCCTGTCAGAGCTGATGAAGATACAACTGGGGAGCAGGAGCATGGAGGTGCTGTGGAGGTGGGGAAGCAACTGGCCTCTCCTCCCTCTGACTGTGGGCCGTCCACCTCTGCCGAGGGGTGCACATCAGCAGCCATGAGGAGAGGCCCGACCCTGGTGCACATCGACAGACATCAGATCCCCGCAGTGGAGCGGAATGCACAGGCCCTAGAGCTGCAGGGCCTGGGTGTGGACGTCTATGACCAGACCGTGCTGGAGCAGGGTGTGCTTCAGCAGGTGGACAGCGCCCTGCACGAGGCCAGTCGAGCAGCCCAGCTTGCAGATGCTGAGAAGGAGTACCAGTCTGTCTTGGATGACCTCATGTCATGTATGACATCTCTGAGGCAAATCAATAAAATTATTGAACAACTTAGCCCTCAAGCTGCTACCAACAGAGACATCAACAGGAAACTAGATTCTGTAAAACGACAGAAATATAATAAGGAACAGCAACTGAAGAAGATCACTGTGAAGCAGAAGCGCCTCCAGGCTGTCCTTGGCAGAGCAGAGGTGAGAGTGGAGCTGGAGCACGCTGGTGGCCTGGAGGAGGAGGATGCAGAACCGGGCCCGTCCTGTCTTGGCATCATGCTCATGCCTGCCCAGAAGACCGCCTGGGAGGAGCTCATTCGCACCGGCCAGATGACACCATTTGGTACCCAGGTCCTTCAGAAAACAGAGAAAAAGCCTAGAAAACTAATGCTCAATGAGGCGTCAGGCTTCGAGAAGTATTTGGCAGATCAAGCGAGACTGTCATTTGAAAGGAAGAAGCAAGCTGCTAATAAAAGAACATCCAGAAAAGCTGCAGCCTCAGTCAAGCCTGCCTCAAATGCACAGTCAAAAGAAAACAAACCAAAGCAGAGAAGCCAGATTCTCTCCAAAACAGACTGGCGCTTGAAGAAGCACATCAGGAAGCTCCAGAAGAAGGCGCTGCAGTTCCAGGGGAAAGTGGGGCTTCCCAGGGGGAAGAGGTCCCTAGGGGCTGAGGCGAGGTTGCAGGCAATGGGAAACTCTGAGAGTGAGGAGCCCAGGTCCTTCCCCATGGAGGGGGAGGAAGAGGGAGATGGGGAGGAGGTAGGGGCTGACCTGTCTGGAGATGGCGCAGACTGTGAGCTGAGGCCTGAGCTCAGGGGCCAAAAACGCCAGAAGAAAGTCCCAGCGCAGGAGAATGATGACGACTTTTCTCCAAGTTCTGGGGAAGAAGCAGAAGCCACTGAAAGAGGCCGAGGAACAGGTCGAAAAGTAGTGAGGTGCTGCGACGATGGAGATGAAGATTATTATAAGCAGCGGTTAAGGAGATGGACTAAACTTAGATTGCAGAACAAAGAGAAACACCTGAAGCTTGAAGACGACTCAGAGGAGAGTGATGCGGAATTTGATGAAGGTTTTAAAGTACCAGGTTTTCTGTTCAAAAAGCTCTTTAAGTACCAGCAGACAGGTGTTAGGTGGCTGTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCTGGGAGACGAGATGGGATTGGGCAAGACCATCCAGATAATTGCCTTCTTGGCAGGTCTGAGCTACAGCAAGATCAGGACTCGTGGTTCAAATTACAGGTTCGAGGGACTGGGCCCCACTATTATTGTCTGCCCAACAACAGTGATGCATCAGTGGGTGAAGGAGTTTCACACGTGGTGGCCTTCCTTCAGAGTGGCGATTCTGCATGAAACTGGCTCCTGTACCCACAGAAAGGAGAATCTGATTCGAGACATTGCCCATTGTCATGGCATTTTGATCACCTCCTACTCCTACATTCGGCTGATGCAGGATGACTTTAGCAGGCAGAACTGGCACTATGTGATCTTGGATGAAGGACACAAAATTCGAAACCCCAATGCTGCTGTCACCCTGGCTTGCAAGCAGTTCCGCACACCTCACCGGATCATCTTGTCAGGCTCGCCGATGCAGAATAACCTCCGAGAGCTGTGGTCGCTCTTTGACTTTGTCTTCCCGGGAAAGTTGGGCACCTTGCCCGTGTTTATGGAGCAGTTCTCTGTCCCCATCACCATGGGGGGATATGCCAATGCTTCTCCTGTGCAGGTTAAAACTGCTTACAAATGTGCATGTGTCTTACGAGACACCATAAACCCATACCTGCTGCGGAGAATGAAGTCAGACGTCAAGATGAGCCTTTCTTTGCCAGATAAAAACGAACAGGTCTTATTTTGCCGTCTTACAGATGAGCAGCATAAAGTCTACCAGAATTTCATCAATTCCAAAGAAGTTTACAAGATTCTCAATGGAGAGATGCAGCTTTTCTCTGGAATTGTAGCTCTAAGAAAAATCTGCAACCACCCTGATCTCTTTTCTGGAGGCCCCAAGAATCTCGGTGGTCTTCCAGATGATGAACTAGAAGAGGATCAGTTTGGATACTGGAAGCGTTCTGGGAAGATGATTGTCGTTGAGTCTTTGCTGAAAATATGGCACAAACAGGGTCAGCGAGTACTGCTGTTTTCTCAGTCGAGACAGATGCTGCACATCCTCGAAGTGTTCCTGAGAGCCCAGAAGTACTCCTATCTCAAGATGGACGGCACCACTACCATCGCCTCTCGCCAGCCTCTGATTGCAAGATACAACGAGGATGCATCCATCTTTGTGTTTCTTCTGACCACGCGGGTAGGCGGCATAGGTGTCAATCTGACCGGGGCCAACAGAGTAATCATCTACGACCCTGACTGGAACCCGAGCACTGACACACAGGCCCGGGAGCGAGCCTGGAGGATAGGCCAGAAGAGGCAGGTCACTGTGTACCGGCTCCTGATGGCTGGCACTATCGAGGAAAAGATTTACCACCGACAAATCTTCAAGCAATTTTTGACAAACAGAGTGCTAAAAGATCCAAAGCCAAGGCGGTTTTTCAAATCCAATGACCTTTATGAGCTATTTACTCTGACTAGCCCTAATGGCTCCCAGAGCACTGAAACAAGTGCTATTTTTGCAGGAATTGGTTCAGATGTTCCAACACCCAAACGCCATTTAAAAAGGAAGATTCTGCCAGCCTTTGGGACAGACCGGGATGTTCCAAAATGCAAGAAGTTCCCAGATTCTAACACACTTGCAAATGTGGCCACGTCATCTGAACATAAATCTAAGGCAACAAGAGCTGAAGGAATCATGGTAACTTCCAGTCCAAGTAACCGTTTGAAAACTGACCCTCACCCGGGTGGCAGGGTAACTAGCAGTGACAGGGTTAGTGAGGGGACAAGTGCAGCGTCTGGACCAGAGGAGCCACCAGTGACCAGTGGAAATGGAGACTGTTCTGATTGCCCACGAATTGGCGGAGCTCTCCTCCTGTCTGGTGAAGAAAACATTGCTGCGAAGCAGGGGCCTTCTGATGAAGGAGACAGCGGCCTGGTTCCAGCAGAACCTCCTCGGGAGAATGAACAGGTGGGAAGTCATTCCTATAAGCACAAGTCGAAAAGGAAGCATCAGGGTGTGGCGGAAGAGGGGACGCTGGAGAAGCGGCAGAAGCACGAGAGCACCAGGCACCGCAGAGATGCCAAGTTCGAGGGCACACGAGTGCCGCACCTGGTGAAGAGAAGGCGGTACCACAGGCATGATCTGGGCCCCGACAGCAAGGCCAGGGTGCACAGTGGTGACGACTATGTTCTAGAAAAGCTCTTCAAGAAATCAGTGGGCGTGCACAGCGTTGTGAAGCATGATGCCATCATGGACGGTGCCAGCCCGGACTACGTGCTGGTGGAGGCAGAAGCCAACCGAGTGGCACAGGACGCCCTGAAAGCCCTGCGGCTGTCCCGTCAGCAGTGTCTAGGTGCTGCGTCTGGTGTTCCCACCTGGACTGGCCACAGGGGCGCCAGAGTGAAGAGTAGATTTGGTCAGAAAAGGAACTCTAACCTCTCTGTGCATCGTCCTTCATCCTCTTCAACAGAAGAATGCCAGGATGGTTTGGTGAAAAGGGAAGGAAAAGACCACATGTCGGAGCACTTCAGTGGAAAAGCTGAGGACACAGACTCTTCCTCCGGGGCCCTCACCTCTTCCTCCCTCTTGGCCAGGATGAGAGCAAGAAACCACCTGATCCTCCCTGAGCGCTTGGAGAGTGAAAATGGGCACGTGGCAGAGGTGTCTGCACCGCCATCCTGCGCCACGGAGCACGATGAGCTACTGGTGGACATGAGGAACTTCATTGCTTTCCAGGCCCGTGTGGATGGCCAGGCCAGCACCCGAGAGCTCCTACAGGAGTTCGAGCCCAAGCTGTCTGCATCACAGTCCTGTGTCTTCCGGGAGCTGCTGAGGAACCTGTGCACCTTTCACAGGACACCAGGCGGGGAAGGAGTGTGGAGACTCAGGCCAGAGTACTGCTGA

Related Sequences

XP_004874587.1 Protein

Ercc6 PREDICTED: DNA excision repair protein ERCC-6 isoform X3 [Heterocephalus glaber]

Length: 1481 aa      View alignments
>XP_004874587.1
MPSEGSRHSCQTQEQEHSQSPPVRADEDTTGEQEHGGAVEVGKQLASPPSDCGPSTSAEGCTSAAMRRGPTLVHIDRHQIPAVERNAQALELQGLGVDVYDQTVLEQGVLQQVDSALHEASRAAQLADAEKEYQSVLDDLMSCMTSLRQINKIIEQLSPQAATNRDINRKLDSVKRQKYNKEQQLKKITVKQKRLQAVLGRAEVRVELEHAGGLEEEDAEPGPSCLGIMLMPAQKTAWEELIRTGQMTPFGTQVLQKTEKKPRKLMLNEASGFEKYLADQARLSFERKKQAANKRTSRKAAASVKPASNAQSKENKPKQRSQILSKTDWRLKKHIRKLQKKALQFQGKVGLPRGKRSLGAEARLQAMGNSESEEPRSFPMEGEEEGDGEEVGADLSGDGADCELRPELRGQKRQKKVPAQENDDDFSPSSGEEAEATERGRGTGRKVVRCCDDGDEDYYKQRLRRWTKLRLQNKEKHLKLEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTIIVCPTTVMHQWVKEFHTWWPSFRVAILHETGSCTHRKENLIRDIAHCHGILITSYSYIRLMQDDFSRQNWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFINSKEVYKILNGEMQLFSGIVALRKICNHPDLFSGGPKNLGGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHKQGQRVLLFSQSRQMLHILEVFLRAQKYSYLKMDGTTTIASRQPLIARYNEDASIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRLLMAGTIEEKIYHRQIFKQFLTNRVLKDPKPRRFFKSNDLYELFTLTSPNGSQSTETSAIFAGIGSDVPTPKRHLKRKILPAFGTDRDVPKCKKFPDSNTLANVATSSEHKSKATRAEGIMVTSSPSNRLKTDPHPGGRVTSSDRVSEGTSAASGPEEPPVTSGNGDCSDCPRIGGALLLSGEENIAAKQGPSDEGDSGLVPAEPPRENEQVGSHSYKHKSKRKHQGVAEEGTLEKRQKHESTRHRRDAKFEGTRVPHLVKRRRYHRHDLGPDSKARVHSGDDYVLEKLFKKSVGVHSVVKHDAIMDGASPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGARVKSRFGQKRNSNLSVHRPSSSSTEECQDGLVKREGKDHMSEHFSGKAEDTDSSSGALTSSSLLARMRARNHLILPERLESENGHVAEVSAPPSCATEHDELLVDMRNFIAFQARVDGQASTRELLQEFEPKLSASQSCVFRELLRNLCTFHRTPGGEGVWRLRPEYC