Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101709183

Database interlinks

Part of NW_004624926.1 (Scaffold)

For more information consult the page for NW_004624926.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CD6 ENSCPOG00000012789 (Guinea pig)

Gene Details

CD6 molecule

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011509, Guinea pig)

Protein Percentage 73.17%
CDS Percentage 78.61%
Ka/Ks Ratio 0.21086 (Ka = 0.1673, Ks = 0.7936)

CD6 ENSG00000013725 (Human)

Gene Details

CD6 molecule

External Links

Gene Match (Ensembl Protein ID: ENSP00000323280, Human)

Protein Percentage 67.05%
CDS Percentage 73.59%
Ka/Ks Ratio 0.1757 (Ka = 0.2189, Ks = 1.2457)

Cd6 ENSMUSG00000024670 (Mouse)

Gene Details

CD6 antigen

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000079172, Mouse)

Protein Percentage 62.68%
CDS Percentage 69.01%
Ka/Ks Ratio 0.2106 (Ka = 0.2783, Ks = 1.3212)

Genome Location

Sequence Coding sequence

Length: 1860 bp    Location: 325327..333357   Strand: +
>XM_004874438.1
ATGGGGCCCCTGACTTCAGGGGCATGGCCGGGGCTGCGCCTGGCCAACTCCAGCAGCCACTGCCTCGGGGAGGTGCAGGTCCGCCTCGGAGCCACCTGGGCACCCGTTTGCGGGGCGCAGTGGGACCAGCAGGCCGCTGAGGCCGTGTGCCGCGCCTTGGGCTGTGGCGGGGCAGAGGCGACCCCTGAGCCTGAGCCCGGGAGCCCCGTGGGCAACACCAGTGTCACCAACGCCACGCGTGGACCTGCGCTCACCATCTGGTGCCAGGGCCCTGAGTGGAGCCTCTGCGAGGTGGTGGAGGACGCGTGTGGCATCGACGTGAGCCCAGCCAGCGTCACCTGCACAGAGGCCCGCGCCCTGCGGCTGGTGGGTGGCGGCAGCGCATGTNNGGAGATGCTGGAGGGCGGCGCGTGGGGCACTGTGTGCGACGACGCGTGGGACCTGCAGGACGCACACGTGGCGTGCAGGCAGCTGGGCTGCGGCTGGGCCGTGGAGGCCGCGCCTGGCCTGCGCTTCCCGGCCGGCCGCGGTCCCATCCACCGCGACGTGGTGACCTGCGGGGGCCACGAGGCGCAGCTGTGGGACTGCGAGGGGCGGCCGGGCGGCTACTGCGGCCACAAGGAGGACGCGGGCGTCGTGTGCTCAGAGCACCAGTCCTGGCGCCTGACGGGAGGCGGTGACCGCTGCGACGGCCAGGTGGAGGTGCAGTTCCGCGGGGTGTGGAGCACAGTGTGTGACAGCGCCTGGTACCGGCCCGAGGCCGACGTGCTGTGCCGGGCCCTGGGCTGCGGACTCGAGGTGGACCGGCCCCCGGGGCAGGCTCACTCGCTGCCAGGCAGGATGTTCTACTCCTGCACGGGGGAGGAGGCCGCGCCCTCTCTCTGCACCTGGAGATTCAACAATTCCAACTTGTGCAGCCAGTCGCGGGCAGCCAGAGTCCTCTGCTCAGGTTCCCAGACACCACACAACCTGTCCTCCTCCCGAGGCCCATTGAGCGTGCAGCCAGCGACTGTCGAATCTCCGGTGGTGGTGGAGACGGAGGGCAAGGGGTCCCGGGACCTGGTGCTGCTCATCCCCAGCATCGTCCTGGGCGTCCTCCTCCTCGGCGCGCTGGTCTCCGTCGCCCTTCTGCTGCTGAGAGTGAAGGGGAAGTACGCCCTCCCTGCGGCCCAGAATCACCGGCACCTCCTCCCCACCGCCACCCCAGCAGAGAGCAATAGCTACCACGCCGTAGCCGGCGTCATCCCCAAAGAAGAAGTTCCCCAGCCACTGGCCCAAGGCCGGGCCGTGTGCCCCAAGGACTCTGACTCCAGCTCCGGCTCCGACTATGAGCACTACGACTTCAGTGCGCAGCCGCCCATGGCCCTGACCACCTTCTACAATTCTCAGCGGTACCGAGTCACAGAGGAGGAGGCCCAGCAGAGCCGGTTCCGGATGCCGCCTTTGGAGGAGGGACTTGAAGAGCTGCAGGTTCCCCCTGTGCTGGCCGCCTTGCCGGGACCCTGTGCCACAGATGCCGCCCTGGGGAACCCTCAGCGTCGCCATGGGGATGACAGTGGGTCCAGCACATCTTCCGGCGAGGACTACTCCAACAGCCCCAGCAGCAAGGCACTGCCCTGGAGCCTCCGCGCGTTTCCCCTGGAGCAGAGCCCGGGCCTGGAGCTGGCAGGGCCCCAGATGCCTTTCCCAGGTGGCGGGCCCCCTGAGGACGACAGCTCCAGCACCTCCTCCGGGGAGTGGTACCAGAACTTCCGGTCGCCACCCCAGGCCCCCTCCACGGAGCAGTTTGAGTGTCCAGGTCCCCCCAGCCCCCAGCCGGACTCCTCCTCCGAGGATTATGATGACATCAGCGCAGCCTAG

Related Sequences

XP_004874495.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: T-cell differentiation antigen CD6 [Heterocephalus glaber]

Length: 619 aa     
>XP_004874495.1
MGPLTSGAWPGLRLANSSSHCLGEVQVRLGATWAPVCGAQWDQQAAEAVCRALGCGGAEATPEPEPGSPVGNTSVTNATRGPALTIWCQGPEWSLCEVVEDACGIDVSPASVTCTEARALRLVGGGSACXEMLEGGAWGTVCDDAWDLQDAHVACRQLGCGWAVEAAPGLRFPAGRGPIHRDVVTCGGHEAQLWDCEGRPGGYCGHKEDAGVVCSEHQSWRLTGGGDRCDGQVEVQFRGVWSTVCDSAWYRPEADVLCRALGCGLEVDRPPGQAHSLPGRMFYSCTGEEAAPSLCTWRFNNSNLCSQSRAARVLCSGSQTPHNLSSSRGPLSVQPATVESPVVVETEGKGSRDLVLLIPSIVLGVLLLGALVSVALLLLRVKGKYALPAAQNHRHLLPTATPAESNSYHAVAGVIPKEEVPQPLAQGRAVCPKDSDSSSGSDYEHYDFSAQPPMALTTFYNSQRYRVTEEEAQQSRFRMPPLEEGLEELQVPPVLAALPGPCATDAALGNPQRRHGDDSGSSTSSGEDYSNSPSSKALPWSLRAFPLEQSPGLELAGPQMPFPGGGPPEDDSSSTSSGEWYQNFRSPPQAPSTEQFECPGPPSPQPDSSSEDYDDISAA