Details from NCBI annotation
| Gene Symbol |
unclassified transcription discrepancy |
|
Gene Name
|
mRNA |
| Entrez Gene ID |
101709183
|
Database interlinks
Part of NW_004624926.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
CD6 molecule
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000011509, Guinea pig)
| Protein Percentage |
73.17% |
| CDS Percentage |
78.61% |
| Ka/Ks Ratio |
0.21086 (Ka = 0.1673, Ks = 0.7936) |
Gene Details
CD6 molecule
External Links
Gene Match(Ensembl Protein ID:ENSP00000323280, Human)
| Protein Percentage |
67.05% |
| CDS Percentage |
73.59% |
| Ka/Ks Ratio |
0.1757 (Ka = 0.2189, Ks = 1.2457) |
Gene Details
CD6 antigen
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000079172, Mouse)
| Protein Percentage |
62.68% |
| CDS Percentage |
69.01% |
| Ka/Ks Ratio |
0.2106 (Ka = 0.2783, Ks = 1.3212) |
Sequence SequenceType object (2)
Length: 1860
bp
Location: 325327..333357
Strand: +
>XM_004874438.1
ATGGGGCCCCTGACTTCAGGGGCATGGCCGGGGCTGCGCCTGGCCAACTCCAGCAGCCACTGCCTCGGGGAGGTGCAGGTCCGCCTCGGAGCCACCTGGGCACCCGTTTGCGGGGCGCAGTGGGACCAGCAGGCCGCTGAGGCCGTGTGCCGCGCCTTGGGCTGTGGCGGGGCAGAGGCGACCCCTGAGCCTGAGCCCGGGAGCCCCGTGGGCAACACCAGTGTCACCAACGCCACGCGTGGACCTGCGCTCACCATCTGGTGCCAGGGCCCTGAGTGGAGCCTCTGCGAGGTGGTGGAGGACGCGTGTGGCATCGACGTGAGCCCAGCCAGCGTCACCTGCACAGAGGCCCGCGCCCTGCGGCTGGTGGGTGGCGGCAGCGCATGTNNGGAGATGCTGGAGGGCGGCGCGTGGGGCACTGTGTGCGACGACGCGTGGGACCTGCAGGACGCACACGTGGCGTGCAGGCAGCTGGGCTGCGGCTGGGCCGTGGAGGCCGCGCCTGGCCTGCGCTTCCCGGCCGGCCGCGGTCCCATCCACCGCGACGTGGTGACCTGCGGGGGCCACGAGGCGCAGCTGTGGGACTGCGAGGGGCGGCCGGGCGGCTACTGCGGCCACAAGGAGGACGCGGGCGTCGTGTGCTCAGAGCACCAGTCCTGGCGCCTGACGGGAGGCGGTGACCGCTGCGACGGCCAGGTGGAGGTGCAGTTCCGCGGGGTGTGGAGCACAGTGTGTGACAGCGCCTGGTACCGGCCCGAGGCCGACGTGCTGTGCCGGGCCCTGGGCTGCGGACTCGAGGTGGACCGGCCCCCGGGGCAGGCTCACTCGCTGCCAGGCAGGATGTTCTACTCCTGCACGGGGGAGGAGGCCGCGCCCTCTCTCTGCACCTGGAGATTCAACAATTCCAACTTGTGCAGCCAGTCGCGGGCAGCCAGAGTCCTCTGCTCAGGTTCCCAGACACCACACAACCTGTCCTCCTCCCGAGGCCCATTGAGCGTGCAGCCAGCGACTGTCGAATCTCCGGTGGTGGTGGAGACGGAGGGCAAGGGGTCCCGGGACCTGGTGCTGCTCATCCCCAGCATCGTCCTGGGCGTCCTCCTCCTCGGCGCGCTGGTCTCCGTCGCCCTTCTGCTGCTGAGAGTGAAGGGGAAGTACGCCCTCCCTGCGGCCCAGAATCACCGGCACCTCCTCCCCACCGCCACCCCAGCAGAGAGCAATAGCTACCACGCCGTAGCCGGCGTCATCCCCAAAGAAGAAGTTCCCCAGCCACTGGCCCAAGGCCGGGCCGTGTGCCCCAAGGACTCTGACTCCAGCTCCGGCTCCGACTATGAGCACTACGACTTCAGTGCGCAGCCGCCCATGGCCCTGACCACCTTCTACAATTCTCAGCGGTACCGAGTCACAGAGGAGGAGGCCCAGCAGAGCCGGTTCCGGATGCCGCCTTTGGAGGAGGGACTTGAAGAGCTGCAGGTTCCCCCTGTGCTGGCCGCCTTGCCGGGACCCTGTGCCACAGATGCCGCCCTGGGGAACCCTCAGCGTCGCCATGGGGATGACAGTGGGTCCAGCACATCTTCCGGCGAGGACTACTCCAACAGCCCCAGCAGCAAGGCACTGCCCTGGAGCCTCCGCGCGTTTCCCCTGGAGCAGAGCCCGGGCCTGGAGCTGGCAGGGCCCCAGATGCCTTTCCCAGGTGGCGGGCCCCCTGAGGACGACAGCTCCAGCACCTCCTCCGGGGAGTGGTACCAGAACTTCCGGTCGCCACCCCAGGCCCCCTCCACGGAGCAGTTTGAGTGTCCAGGTCCCCCCAGCCCCCAGCCGGACTCCTCCTCCGAGGATTATGATGACATCAGCGCAGCCTAG
Related Sequences
unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: T-cell differentiation antigen CD6 [Heterocephalus glaber]
Length: 619
aa
>XP_004874495.1
MGPLTSGAWPGLRLANSSSHCLGEVQVRLGATWAPVCGAQWDQQAAEAVCRALGCGGAEATPEPEPGSPVGNTSVTNATRGPALTIWCQGPEWSLCEVVEDACGIDVSPASVTCTEARALRLVGGGSACXEMLEGGAWGTVCDDAWDLQDAHVACRQLGCGWAVEAAPGLRFPAGRGPIHRDVVTCGGHEAQLWDCEGRPGGYCGHKEDAGVVCSEHQSWRLTGGGDRCDGQVEVQFRGVWSTVCDSAWYRPEADVLCRALGCGLEVDRPPGQAHSLPGRMFYSCTGEEAAPSLCTWRFNNSNLCSQSRAARVLCSGSQTPHNLSSSRGPLSVQPATVESPVVVETEGKGSRDLVLLIPSIVLGVLLLGALVSVALLLLRVKGKYALPAAQNHRHLLPTATPAESNSYHAVAGVIPKEEVPQPLAQGRAVCPKDSDSSSGSDYEHYDFSAQPPMALTTFYNSQRYRVTEEEAQQSRFRMPPLEEGLEELQVPPVLAALPGPCATDAALGNPQRRHGDDSGSSTSSGEDYSNSPSSKALPWSLRAFPLEQSPGLELAGPQMPFPGGGPPEDDSSSTSSGEWYQNFRSPPQAPSTEQFECPGPPSPQPDSSSEDYDDISAA