Details from NCBI annotation

Gene Symbol Ift140
Gene Name intraflagellar transport 140 homolog (Chlamydomonas), transcript variant X1
Entrez Gene ID 101713613

Database interlinks

Part of NW_004624913.1 (Scaffold)

For more information consult the page for NW_004624913.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IFT140 ENSCPOG00000003314 (Guinea pig)

Gene Details

intraflagellar transport 140 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002994, Guinea pig)

Protein Percentage 90.0%
CDS Percentage 90.75%
Ka/Ks Ratio 0.26418 (Ka = 0.0611, Ks = 0.2312)

IFT140 ENSG00000187535 (Human)

Gene Details

intraflagellar transport 140 homolog (Chlamydomonas)

External Links

Gene Match (Ensembl Protein ID: ENSP00000406012, Human)

Protein Percentage 80.66%
CDS Percentage 82.76%
Ka/Ks Ratio 0.15155 (Ka = 0.1072, Ks = 0.7076)

Ift140 ENSMUSG00000024169 (Mouse)

Gene Details

intraflagellar transport 140

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024983, Mouse)

Protein Percentage 84.36%
CDS Percentage 84.52%
Ka/Ks Ratio 0.1492 (Ka = 0.0867, Ks = 0.5809)

Ift140 ENSRNOG00000016545 (Rat)

Gene Details

Protein Ift140

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022063, Rat)

Protein Percentage 84.77%
CDS Percentage 84.36%
Ka/Ks Ratio 0.13804 (Ka = 0.0842, Ks = 0.6098)

Genome Location

Sequence Coding sequence

Length: 4398 bp    Location: 616299..712040   Strand: +
>XM_004873744.1
ATGGCTCTCTATTTTGACCACCAAATCAAAGCCCCGAATTCTGTTGGATCACCCTTCCACATCAGTTGGCATGCTGTTCACCCATTCCTGGCAGTTGCTTCCATGAGTGCAGCCTCAAGAGGCAGTGTGGATATCTATCTGGAACAAGGTGAGCATGTACCTGAAACACATATTGAAAGGTCCTTCCGAGTCACCTCTCTGTGCTGGCATCCGACACGGCTGCTACTTGCTGTTGGCTGGGAGACCGGAGAAGTGATAGTGTTCAATAAGCAGGACAAGGAGCAGCACACCATGCCCCCGACACACATCACTGACATCACCATCCTCACTTGGAGCACCAATGGTAGCTGCCTGGTGTCTGGGGACAGGCTCGGTGTCCTGCTCCTGTGGAGGTTGGACCAGCGGGGTCGGGTGCAGGGAACACCCCTGCTGAAGCACGAATATGAAAAGCACCTCACTCATTGCATCTTCCGACTTCCCCCTCCTGGCAAGGACCTGGTTCAATTGGCAAGGGCAGCAGTCAATGGCGATGAGAAGGCCCTGGACATGTTTAACTGGAAGAAAAGCAGCTTTGGAAGTTTCCTGAAGATGGGATCTCAAGAGGGGCTGTCATTCTTCATCAGTCTCATGGATGGGTCAGTCCACTATGTGGATGAGAAAGGCAAGACCACCTGTGTGGCATCCACACACAGCTCCATCCAGACACTGTTCTACATTGAGAAGAGAGAGGCGCTGGTGGTGGTCACAGAGAACCTCCTGCTGTCCCTGTACATGGTGATGCCTGAGGGTAAAGCTGAGGAAGTGATGAAGGTAAAGCTGAGTGGAAAAACAGGTCTCCGGGCAGACATCACTTTGATTGAAGGCAGCCTTCTTGTGATGGCCATAGGGGAAGCCATCCTCAGATTCTGGGACTTGGAACGGGGAGATAATTACATACTGAATCTAGAAGAGAAGTTTGGCTTTGAAAAAGAAGAAAATATAAACTGCATTTGCTACTGTAAAGCCAAAGGTCTTCTAGCAGCTGGTACTGATAAAGGGCGAATAGCCATGTGGAAAAGAGTGGCAGGCTCCCCAAGCAGCCGAGAGGTGGAAGGCAAGGACAAATGGGCCCCTCAGACCCCCACTGAGCTCGAAGGAAACATCACTCAAATAAAGTGGGGCTCCAGGAAGAACCTTCTGGCAGTGAATAACATCAGCTCCATAGTGATCCTCAGAGAGCAGGCCGTGTCATTGCACTTCCACCAGCAGGTGGCCTCGGTGCAGGTCTCCCCAAGCTTACTTAATGTATCCTTCCTGTCTAAGGGGGGAGTGTACAGCCTGCACACAGACATGCACATCAGCGGAGTGTTCGCCACCAAGGATGCTGTCGCTGTCTGGAATGGAACACATGTAGCAATCTTTGAGCCTTCTGGAGCCACATTACGGAATGCAGGGACCTTCCTGTGTGAGTCCCCAGTGTTAGCAATGCATGAGGAAAATGTGTATACAGTGGAGCCAAACCGAGTTCAAGTTCGGACCTGGCAGGGGACTGTCAAACAGCTCCTAATGTTCTCCAAGACTGAGGGAAACCCGTGCTTCCTGGACATCTGTGGAAATTTCCTGGTCGTAGGAACAGATTTAGCTCACTTTAAAAGTTTTGATCTCTCCCGAAGAGAGGCAAAGGTGCACTGCAACTGTAGGAACCTGGCTGAGCTGATCCCTGATGTGGGGTCCATCATTTCTCTCAGATGCAATGCCAGTGGGAGCAAGATCAGCATCCTCCTCAGCAAGGTTGACAACACTCCTGATTCCAGAATCTGCCTCTATGATGTTGAAATGGACTCAGTGGCTATCCTTGACCTCAAGACTGGAGAGATTGATCAGAGAGAGACACTACCCTTTAATGGGCAAGAAACTAACAAGAGTCACATCTTCACAGATGAGAGACTGACAAACTACATTCCCATGAACCATTACTGGGATCAGAATGAACCCAGGCTCTTCGTGTGTGAGGTCATGCAAGAGGCACTGGGAGCCCAGGCTACAGGAGGCAAGCAGCCCTATCCTGAGGAGAGCACCAGCCCCACAGTACCTACCACTTTGCACATGGAGGATGTTTTGATCTTGTCATTCTTCGTTTCCGAAGATCATGGCTTCTTGCTCCATGACAGCTTCCCTCGACCTCCTGCCTACCAGACCCTGCTGGGGATGGAAGTGCCCCATTACTACTTCACAAAAAAGCCTGGAGAAGCAGATGGAGAAGACAGGGTGCATTCTGAGCACTACTGCATCCCCCAGATGGTGGCCAGGAGACCTTTACGAGACTTTGTGGGGCTGGAGGACTGTGACAAGCCCACTCAGGATGCCATGCTCAACTTCAGCTTCTTCATCACTGTGGGAGACATGGATGAAGCTTTCAAATCTATTAAACTCATCAAGAGTGAGGCTGTCTGGGAGAACATGGCACGCATGTGTGTGAAGACCCAGCGGCTGGACGTTGCCAAAGTGTGCCTAGGGAACATGGGCCATGCCCGTGGGGCTCAAGCACTGCGGGAGGCTGAGCAGGAGCCAGAACTGGAGGCCAGAGTGGCCATGCTGGCTATACAGCTGGGCATGCTGGAGGATGCAGAGCAACTATACAAGAAATGTAAGCGCTATGACCTCCTGAACAAGTTCTTCCAGGCCTCAGGCCAGTTGCAGAAAGCTGTGGAGGTGGCTGAGCAGTATGACCGCATGCACCTGCGCACCACCTACTATAACTATGCCAAGCACCTGGAGGCCAACAGTGACTGCAGCCTGGCCCTCAGCTACTACGAGAAGTCAGACACCCACCGCTTTGAGGTACCCAGGATGCTTGCAGAGGACCTGAAATCCCTGGAACTCTACATCAATAAGATGAAGGACAAGACACTGTGGAGGTGGTGGGCCCAGTACTTGGAGAGTCAGGCAGAGATGGATGCTGCACTGCACTACTATGAACTGGCTCAGGACTACTTCTCCTTGGTCCGCATTCACTGCTTTCAGGGCAACATTCCAAAGGCTGCTGAAATAGCCAACGAGACTGGAAACTGGGCAGCATCCTATCACCTCGCACGACAATACGAGAGCCAGGAGGATGTGAGGCAGGCAGTGTGCTTTTATACACGGGCACAGGCCTTCAACAACGCCATCCGCCTGTGCAAGGAGAACGGCCTGGATGATCAGCTAATGAACTTGGCCCTGCTGAGCTCCCCAGAAGATATGATAGAGGCAGCTCGATACTATGAGGAGAAGGGTGACCAGATGGATAGGGCAGTCATGCTGTATCACAAGGCTGGTCACTTCTCCAAGGCCTTGGAGCTGGCCTTTGCTACCCAGCAGTTTGCTGCCCTACAGCTCATAGCAGAAGACCTGGATGAGAAGTCAGACCCTGCCCTCCTGTCCCGCTGCTCAGACTTCTGCATTGAGCACAAGCAGTTTGAGAAGGCCGTGGAGCTGCTGTTGGCTGCCAAGAAGTATCATGAGGCTCTGCAGCTGTGCCTGGAGCAGAATATGACCATCACTGAGGAGATGGCAGAGAAGATGACTGTGCCCAAGGACTCCAAGGTCCTGTCTGAGGAGTCCCGCCGTGAGCTGCTAGAACAGATCGCCAACTGTTGCATGCGCCAAGGAAACTACCACCTAGCCACCAAGAAGTACACGCAGGCTGGGAACAAGCTGAAGGCCATGAGAGCACTGCTCAAGTCTGGAGACACAGAGAAAATTGTATTCTTTGCGGGTGTCTCAAGGCAGAAGGAAATCTACATCATGGCTGCCAATTATCTGCAGTCCCTGGATTGGTGGAAGGAGCCAGAGATTATGAAGAACATAATCAGCTTCTACACCAAAGGGCGGGCCTTGGACCTCCTGGCTGGCTTCTATGATGCCTGTGCCCAGGTGGAGATTGATGAATACCAGAACTACAGCAAGGCCCATGGGGCACTGACTGAGGCCTACAAGTGCTTGGCCAAGGCCAAGGCCAAGAGCCCCCTGGACCAGGAGACCAAGCTGGCCCAGCTGCAGAGCAAGATGACACTGGTGAAACGATTCATCCAGGCCCGCAGGTCCTACACAGAGGACCCCAAAGAGTCTATCAGGCAATGTGAGCTGCTCCTGGAGGAGACAGACCTGGACAGCACCATCCGCACTGGGGACATCTTTGGCTTCCTAGTGGAGCGCTATATGCAGATGGAGGACTACCAGATGGCCTACCGGTACCTGGAAGAGATGCGGAAGAAACTCCCTTCTGCCAACATGGCATACTACGTGGATCAGCGAACCATGGACACCGTGTACCGGGCCCTGGGCCTCCCTCTGACACACATGCTACCTGAGCGGACCCACCACAACAGCATAGAGGACCAGGAGGAGGTGGTAGAAGAGGTAGACAATGACCCTTGA

Related Sequences

XP_004873801.1 Protein

Ift140 PREDICTED: intraflagellar transport protein 140 homolog isoform X1 [Heterocephalus glaber]

Length: 1465 aa      View alignments
>XP_004873801.1
MALYFDHQIKAPNSVGSPFHISWHAVHPFLAVASMSAASRGSVDIYLEQGEHVPETHIERSFRVTSLCWHPTRLLLAVGWETGEVIVFNKQDKEQHTMPPTHITDITILTWSTNGSCLVSGDRLGVLLLWRLDQRGRVQGTPLLKHEYEKHLTHCIFRLPPPGKDLVQLARAAVNGDEKALDMFNWKKSSFGSFLKMGSQEGLSFFISLMDGSVHYVDEKGKTTCVASTHSSIQTLFYIEKREALVVVTENLLLSLYMVMPEGKAEEVMKVKLSGKTGLRADITLIEGSLLVMAIGEAILRFWDLERGDNYILNLEEKFGFEKEENINCICYCKAKGLLAAGTDKGRIAMWKRVAGSPSSREVEGKDKWAPQTPTELEGNITQIKWGSRKNLLAVNNISSIVILREQAVSLHFHQQVASVQVSPSLLNVSFLSKGGVYSLHTDMHISGVFATKDAVAVWNGTHVAIFEPSGATLRNAGTFLCESPVLAMHEENVYTVEPNRVQVRTWQGTVKQLLMFSKTEGNPCFLDICGNFLVVGTDLAHFKSFDLSRREAKVHCNCRNLAELIPDVGSIISLRCNASGSKISILLSKVDNTPDSRICLYDVEMDSVAILDLKTGEIDQRETLPFNGQETNKSHIFTDERLTNYIPMNHYWDQNEPRLFVCEVMQEALGAQATGGKQPYPEESTSPTVPTTLHMEDVLILSFFVSEDHGFLLHDSFPRPPAYQTLLGMEVPHYYFTKKPGEADGEDRVHSEHYCIPQMVARRPLRDFVGLEDCDKPTQDAMLNFSFFITVGDMDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKVCLGNMGHARGAQALREAEQEPELEARVAMLAIQLGMLEDAEQLYKKCKRYDLLNKFFQASGQLQKAVEVAEQYDRMHLRTTYYNYAKHLEANSDCSLALSYYEKSDTHRFEVPRMLAEDLKSLELYINKMKDKTLWRWWAQYLESQAEMDAALHYYELAQDYFSLVRIHCFQGNIPKAAEIANETGNWAASYHLARQYESQEDVRQAVCFYTRAQAFNNAIRLCKENGLDDQLMNLALLSSPEDMIEAARYYEEKGDQMDRAVMLYHKAGHFSKALELAFATQQFAALQLIAEDLDEKSDPALLSRCSDFCIEHKQFEKAVELLLAAKKYHEALQLCLEQNMTITEEMAEKMTVPKDSKVLSEESRRELLEQIANCCMRQGNYHLATKKYTQAGNKLKAMRALLKSGDTEKIVFFAGVSRQKEIYIMAANYLQSLDWWKEPEIMKNIISFYTKGRALDLLAGFYDACAQVEIDEYQNYSKAHGALTEAYKCLAKAKAKSPLDQETKLAQLQSKMTLVKRFIQARRSYTEDPKESIRQCELLLEETDLDSTIRTGDIFGFLVERYMQMEDYQMAYRYLEEMRKKLPSANMAYYVDQRTMDTVYRALGLPLTHMLPERTHHNSIEDQEEVVEEVDNDP