Details from NCBI annotation

Gene Symbol Opa3
Gene Name optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
Entrez Gene ID 101707936

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OPA3 ENSCPOG00000012500 (Guinea pig)

Gene Details

optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011247, Guinea pig)

Protein Percentage 91.67%
CDS Percentage 92.22%
Ka/Ks Ratio 0.10796 (Ka = 0.0402, Ks = 0.3723)

OPA3 ENSG00000125741 (Human)

Gene Details

optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)

External Links

Gene Match (Ensembl Protein ID: ENSP00000319817, Human)

Protein Percentage 79.44%
CDS Percentage 84.81%
Ka/Ks Ratio 0.15202 (Ka = 0.1096, Ks = 0.7212)

Opa3 ENSMUSG00000052214 (Mouse)

Gene Details

optic atrophy 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000069965, Mouse)

Protein Percentage 86.59%
CDS Percentage 83.99%
Ka/Ks Ratio 0.05522 (Ka = 0.0754, Ks = 1.3661)

Genome Location

Sequence Coding sequence

Length: 543 bp    Location: 7580823..7604773   Strand: +
>XM_004867145.1
ATGGTGGTGGGCGCGTTCCCTATGGCGAAGCTGCTATACCTCGGCATCCGGCAGGTCAGCAAGCCGCTTGCCAACCGCATTAAGGAGGCTGCCCGCCGAAGCGAGTTCTTCAAGACCTATGTCTGCCTTCCGCCGGCACAGCTGTACCACTGGGTGGAGATGCGGACCAAGATGCGCATCATGGGCTTCCGGGGCACGGTCATCAAGCCGCTCAACGAGGAGGCGGCCGCTGAGCTGGGCGCCGAGCTGCTGGGCGAAGCCACCATCTTCATCGTGGGCGGGGGCTGCCTGGTGCTGGAGTACTGGCGCCACCAGACGCAGCAGCGCCACAAGGAGGAGGAGCAGCGCGCTGCCTGGGACGCGCTGCGGGACGAAGTGGGCCACCTGGCACTGGCGCTCGAGGCGCTGCAGGCGCAGGTGCAAGCGGCGTCGTCTCAGAGCGCCCTGGAGGAGCTGCGCGCCGAGCTGCAGGAGGTGCGCGCGCAGCTCTGCGCCCCTGACCCGCCGCCCGCGTGCCACGCAGCGTCTTCCTCCAAGAAATAG

Related Sequences

XP_004867202.1 Protein

Opa3 PREDICTED: optic atrophy 3 protein [Heterocephalus glaber]

Length: 180 aa     
>XP_004867202.1
MVVGAFPMAKLLYLGIRQVSKPLANRIKEAARRSEFFKTYVCLPPAQLYHWVEMRTKMRIMGFRGTVIKPLNEEAAAELGAELLGEATIFIVGGGCLVLEYWRHQTQQRHKEEEQRAAWDALRDEVGHLALALEALQAQVQAASSQSALEELRAELQEVRAQLCAPDPPPACHAASSSKK