Details from NCBI annotation

Gene Symbol Pnmal1
Gene Name paraneoplastic Ma antigen family-like 1, transcript variant X1
Entrez Gene ID 101725894

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNMAL1 ENSCPOG00000011877 (Guinea pig)

Gene Details

paraneoplastic Ma antigen family-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010683, Guinea pig)

Protein Percentage 81.46%
CDS Percentage 86.04%
Ka/Ks Ratio 0.34336 (Ka = 0.1125, Ks = 0.3276)

PNMAL1 ENSG00000182013 (Human)

Gene Details

paraneoplastic Ma antigen family-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000318131, Human)

Protein Percentage 73.74%
CDS Percentage 80.37%
Ka/Ks Ratio 0.24621 (Ka = 0.1495, Ks = 0.6072)

Pnmal1 ENSMUSG00000041141 (Mouse)

Gene Details

PNMA-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000040929, Mouse)

Protein Percentage 65.57%
CDS Percentage 72.68%
Ka/Ks Ratio 0.23363 (Ka = 0.2308, Ks = 0.988)

Pnmal1 ENSRNOG00000027944 (Rat)

Gene Details

paraneoplastic Ma antigen family-like 1 (Pnmal1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034811, Rat)

Protein Percentage 65.66%
CDS Percentage 73.4%
Ka/Ks Ratio 0.26643 (Ka = 0.2374, Ks = 0.8911)

Genome Location

Sequence Coding sequence

Length: 1317 bp    Location: 7023693..7027398   Strand: +
>XM_004867104.1
ATGTCAGAGGCCACGGCGATGAATCTCCTGGAGGACTGGTGTCGCGGGATGGAAGTGGACATCCACAGGTCCCTGTTGGTCACGGGCATCCCCGAGGACTGCGGCCAAGCAGAGCTCGAGGAGATCTTGAATGGGGTCCTTGCCCCCCTGGGCACGTACCGCGTGCTCAACAAGATATTTTTGAGGGAAGAGAATGTCAAGGCGGCCCTCATCGAGGTGGGCGAGGGTGTGAACTTGAGCTCTGTACCCCGAGAGTTCCCCGGAAGGGGTGGCGTCTGGAAGGTCATCTGTAGGGATCCCACCCAGGATGCTGAGTTTTTGAAAAACTTGAATGAATTCCTGGATGCTGAGGGGCGCACCTGGGAAGATGTGGTCCACCTCCTACAACTGAACCAACCCCCACCACCCCAAAGTCCAAACCAGATCTCAGAGAACTGGGCGGAAGCTTTGGGGGTGCTCCTGGGAGCTGTGGTGCAGGTCATCTTGTGCATGGATGCTGAGATCCGCAGCAGGGAGGAGGCTCGGGCTCAGGAGGCCGCTGAGGCTGAGGAGGGAGCAGCATGGGCTTTGGCAGCAGGGAAGAAGGTCAAGAAGGAGCCAGGGCTTGCCAAGGAGGTGGGCTCTGCCTTGAAGATGGAGAAGCCCACCCGCTGGAAGGGCATGGAAGACCAGGATGACCCCGCCAAGCCGATAGTTCATAGGGCTGGAGCTAAGACTCACTCCAGGAAAAAGAAGCAGAAGAAAAACCCCAAGCAGGAACCAGTGCTCTGGAAAAAACCCAAAGGCAGCCCTTGCAGCAGCTCGGCCTACTCAGAGGGGCCTGAGGCTGGTGATGTGCAAAGTATGGAGATCTCAGAGTCTGGCAAAAGCCACAGAAAGCCCTGTGTGAAGCAGGGGGAGCCGGCTTCGAAGAAGCCCATGGAGAAAAGTGTCTGGAAGGTTCCCAGAGAGCCACCTCAGGATGCCCTGAGGGGAGCTGAGAACCCTCGAGGTGCCTCTGAGTCAGATCAAGATGGCGGTCAGGGGAGGCCACCAAAGAGGAAGGCTGAAGGCTGGGCCTCGGGAAAGAGCCTCACCCCGGTGAGGAAGAAGAAGAAGGTGAGCTTGGGCCCTGTCTCTTATGTCCTTGTCGATTCCGAAGATGCCAAGAAGAAGCTGATGATTCCGAAGAAAGGGCTAAACTCCAGAAGGGATGTGTCGGCTAAGAAGGTCCTGTGTGGCCTGAACCCTGCTGCAGTGCCATCCTCAACGTCCAGGGCTCCAAAGGCCAAGCCTGCAGGCTCTCCTCGGGCCTCCAAGGATTCCAGAAAGCTTTGA

Related Sequences

XP_004867161.1 Protein

Pnmal1 PREDICTED: PNMA-like protein 1 isoform X1 [Heterocephalus glaber]

Length: 438 aa      View alignments
>XP_004867161.1
MSEATAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAELEEILNGVLAPLGTYRVLNKIFLREENVKAALIEVGEGVNLSSVPREFPGRGGVWKVICRDPTQDAEFLKNLNEFLDAEGRTWEDVVHLLQLNQPPPPQSPNQISENWAEALGVLLGAVVQVILCMDAEIRSREEARAQEAAEAEEGAAWALAAGKKVKKEPGLAKEVGSALKMEKPTRWKGMEDQDDPAKPIVHRAGAKTHSRKKKQKKNPKQEPVLWKKPKGSPCSSSAYSEGPEAGDVQSMEISESGKSHRKPCVKQGEPASKKPMEKSVWKVPREPPQDALRGAENPRGASESDQDGGQGRPPKRKAEGWASGKSLTPVRKKKKVSLGPVSYVLVDSEDAKKKLMIPKKGLNSRRDVSAKKVLCGLNPAAVPSSTSRAPKAKPAGSPRASKDSRKL