Sequence details NCBI ID: XM_004867090.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Strn4
Gene Name striatin, calmodulin binding protein 4, transcript variant X1
Entrez Gene ID 101720977

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STRN4 ENSCPOG00000001053 (Guinea pig)

Gene Details

striatin, calmodulin binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000950, Guinea pig)

Protein Percentage 95.52%
CDS Percentage 92.8%
Ka/Ks Ratio 0.06796 (Ka = 0.0204, Ks = 0.3)

STRN4 ENSG00000090372 (Human)

Gene Details

striatin, calmodulin binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000375777, Human)

Protein Percentage 94.47%
CDS Percentage 89.72%
Ka/Ks Ratio 0.05136 (Ka = 0.0278, Ks = 0.5408)

Strn4 ENSMUSG00000030374 (Mouse)

Gene Details

striatin, calmodulin binding protein 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000019220, Mouse)

Protein Percentage 93.81%
CDS Percentage 87.04%
Ka/Ks Ratio 0.05264 (Ka = 0.035, Ks = 0.6641)

Strn4 ENSRNOG00000016145 (Rat)

Gene Details

striatin, calmodulin binding protein 4 (Strn4), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021976, Rat)

Protein Percentage 93.4%
CDS Percentage 86.41%
Ka/Ks Ratio 0.04988 (Ka = 0.0368, Ks = 0.7369)

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location: 6858123..6883514   Strand: +
Raw sequence   
>XM_004867090.1
ATGATGGAGGAGCGAGCGGCCGCCGCGGTCGCCGCCGCCGCCTCCGCCTCCTCCTGCCGCCCGCTCGGCTCCGCTGCGGGTCCTGGCCCGCCTGGGACGGGCCCCGTCTCCAGCCCTGCCCCCGGGCCCGGCCCAGCAGGAAAGGGTGGCGGCGGCGGAGGCAGCCCGGGGCCCGCGGCCGGCCCGGAGCCCCTGAGCCTCCCCGGGATCCTGCACTTTATTCAGCACGAGTGGGCGCGCTTCGAGGCCGAGAAGGCCCGCTGGGAGGCCGAACGCTCCGAGCTGCAGGCTCAGGTGGCCTTTCTCCAGGGAGAGCGGAAAGGGCAGGAGAATCTAAAGACAGACCTGGTGCGGCGGATCAAGATGTTAGAATACGCGCTGAAGCAGGAAAGGGCCAAATATCATAAACTGAAGTTTGGGACAGACCTGAACCAGGGGGAGAAGAAACCAGATCTGCCAGAACAAGTTCCCAATGGCCCTGTGGAGTCAGTCACCCTGGAGAACAGCCCTCTGGTGTGGAAGGAGGGACGGCAGCTGCTCCGACAGTACCTGGAAGAGGTGGGCTACACGGACACCATCCTTGACATGCGGTCCAAGCGTGTGCGCTCCCTGCTTGGACGCTCCCTAGAGCTCAACGGGGCTACTGAGTCCAGCGAGGGGCCCCCCAGGGTGGCACCTAATCCTGGGGGCCTCAGTGGCAGCGAGTCCCTGCTGGTGAAGCAGATTGAGGAGCAGATCAAGAGGAATGCAGCAGGCAAAGATGGCAAAGAGCGTCTGGGTAGCTCGGTGCTGGAGCAGATCCCCTTCCTGCAGAACTGCGAGGATGAGGACAGCGATGAGGATGATGAGCTGGACAGTGTGCAGCACAAGAAGCAGCGCGTGAAGCTCCCTTCCAAGGCCTTGGTGCCTGAGATGGAGGATGAGGATGAGGAGGACGACTCAGAGGATGCCATCAACGAGTTTGATTTCCTGGGCTCGGGAGAGGATGGGGAGGGGTCTCCAGGCCCTCGGCGGTGTACCAGTGAGGGGACCCCCCACGAGCTGGAGAGCCGTCGAGTCAAGCTCCAGGGAATTCTGGCCGACCTTCGGGACGTAGATGGGCTGCCCCACAAAGTGACAGGCCCACCTCCCGGCACACCCCAGCCCCGGCCCCACGAAGGTTCCTTTGGCTTCTCCTCAGACGTTTTCATCATGGACACTATCGGGGGCGGGGAGGTGAGCCTGGGGGACTTGGCAGATCTCACCGTCACCAACGACAACGACCTCAGCTGTGATCTGTCTGACAGCAAAGATGCCTTCAAGAAGACATGGAACCCCAAGTTCACCCTCCGCTCACACTATGATGGCATCCGCTCCCTGGCTTTCCATCACAGCCAGTCGGCACTGCTCACCGCCTCCGAGGACGGCACACTCAAGCTCTGGAACCTGCAGAAGGCAGTCACGGCCAAGAAGAATGCTGCACTGGACGTGGAACCAATCCATGCCTTCCGAGGTCACAGGGGGCCTGTGTTGGCGGTGGCTGTGGGCAGCAACAGTGAATACTGCTACAGTGGCGGTGCCGACGCCCGCATCCACAGCTGGAAAATTCCGGACCTCAACATGGACCCCTACGATGGTTACGACCCCAGCGTCCTGAGCCACATCCTAGAGGGCCATGGGGATGCCGTGTGGGGCTTGGCCTTCAGCCCCACCTCCCAGCGCCTGGCGTCCTGCTCTGCTGATGGCACCGTGCGCATCTGGGACCCCAGCAGCAGCCCGGCCTGCCTCTGTACCTTCCCTGCAGCCAGTGAGCACGGAGTTCCCACTTCAGTGGCCTTCACCAGCACCGAGCCTGCCCACATCGTGGCCTCCTTCCGCTCTGGTGACACCATCCTGTATGACCTAGAGACTGGCAGTGCCCTCCTCACGCTGGAGTCCCGGGGAAGCAGCGGCCTAAGCCAAATCAACCAGGTGGTGAGTCACCCCAACCAGCCCCTTACCATCACTGCCCATGACGACAGGGGCATCTGCTTCCTGGACAATCGGACAGGTAAATCCGTGCACTCCATGGTTGCCCACCTGGATGCGGTCACCTGCCTAGCTGTGGACCCCAATGGCGTTTTCCTGATGTCAGGAAGCCACGACTGCTCCCTGCGCCTGTGGAGCCTGGACAACAAGACGTGCGTGCAGGAGATCACAGCCCACCGCAAGAAGCATGAGGAGGCCATCCATGCTGTTGCCTGCCACCCCAGCAAGGCCCTCATCGCCAGTGCTGGCGCCGATGCCCTGGCCAAGGTCTTCGTATGA

Related Sequences

XP_004867147.1 Protein

Strn4 PREDICTED: striatin-4 isoform X1 [Heterocephalus glaber]

Length: 761 aa      View alignments
>XP_004867147.1
MMEERAAAAVAAAASASSCRPLGSAAGPGPPGTGPVSSPAPGPGPAGKGGGGGGSPGPAAGPEPLSLPGILHFIQHEWARFEAEKARWEAERSELQAQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKPDLPEQVPNGPVESVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLELNGATESSEGPPRVAPNPGGLSGSESLLVKQIEEQIKRNAAGKDGKERLGSSVLEQIPFLQNCEDEDSDEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGSPGPRRCTSEGTPHELESRRVKLQGILADLRDVDGLPHKVTGPPPGTPQPRPHEGSFGFSSDVFIMDTIGGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRGHRGPVLAVAVGSNSEYCYSGGADARIHSWKIPDLNMDPYDGYDPSVLSHILEGHGDAVWGLAFSPTSQRLASCSADGTVRIWDPSSSPACLCTFPAASEHGVPTSVAFTSTEPAHIVASFRSGDTILYDLETGSALLTLESRGSSGLSQINQVVSHPNQPLTITAHDDRGICFLDNRTGKSVHSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALIASAGADALAKVFV