Details from NCBI annotation

Gene Symbol Npas1
Gene Name neuronal PAS domain protein 1
Entrez Gene ID 101719003

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NPAS1 ENSCPOG00000023069 (Guinea pig)

Gene Details

neuronal PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021086, Guinea pig)

Protein Percentage 82.06%
CDS Percentage 81.65%
Ka/Ks Ratio 0.17272 (Ka = 0.1203, Ks = 0.6963)

NPAS1 ENSG00000130751 (Human)

Gene Details

neuronal PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000469142, Human)

Protein Percentage 85.99%
CDS Percentage 85.81%
Ka/Ks Ratio 0.09335 (Ka = 0.0674, Ks = 0.722)

Npas1 ENSMUSG00000001988 (Mouse)

Gene Details

neuronal PAS domain protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002053, Mouse)

Protein Percentage 83.51%
CDS Percentage 80.44%
Ka/Ks Ratio 0.09798 (Ka = 0.097, Ks = 0.9897)

Npas1 ENSRNOG00000015376 (Rat)

Gene Details

neuronal PAS domain protein 1 (Npas1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020855, Rat)

Protein Percentage 83.51%
CDS Percentage 79.4%
Ka/Ks Ratio 0.08178 (Ka = 0.0975, Ks = 1.1925)

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location: 6642228..6627281   Strand: -
>XM_004867084.1
ATGGCGACCCCGTACCCCGGCAGCGAGGTCAAGTGCGGGGCGGGCCGTGGCGCCAGCGTCCCGTGGGACTTTCTGCCTGGGCTCTTGGTCAAGGCCCCGCCCGGACCCTGCCTGCAGGCGCAGCGCAAGGAGAAGTCTCGAAACGCGGCGCGCTCCCGGCGCGGGAAGGAAAACCTGGAGTTCTTTGAGCTGTCCAAGCTGCTCCCATTGCCCGGCGCCATCTCCAGCCAGCTGGACAAGGCCTCCATCGTGCGCCTCAGCGTCACCTACCTCCGCCTGCGCCGCTTCGCCGCGCTCGGGGCGCCGCCCTGGGGGCTTCGGGCCGTGGGGCCGCCGGCTGGACTCGGGTTCGCCCCCGGACGCCGTGGCCAAGCGGCTCTGGTCTCTGAGGTCTTCGAGCAGCACCTGGGAGGACATATCCTGCAGTCCCTGGACGGCTTCGTTTTCGCCTTGAACCAGGAAGGAAAATTCCTGTACATCTCCGAAACCGTCTCCATCTACCTGGGTCTCTCACAGGTGGAGCTGACGGGCAGCAGCGTCTTCGACTACATTCACCCCGGGGACCACACCGAGGTGCTGGAGCAGCTGGGACTGCGGGCCCGGACTCCCGGTCCCCCCACCCCGCCCTCCGTCTCCTCCTCTTCCTCCTCCTCTTCCTCCTCGCAGGCGGATATCCCTGAGATCGACGCCAGCCCTGCCGAGGCGCCCCCTTCTGCCCGGGTCCAAGAACGCTCCTTCTTCGTCCGTATGAAATCCACCCTCACCAAGAGAGGGCTGCACGTCAAGGCGTCAGGGTACAAGGTCATCCACGTGACAGGGCGCCTGCGGGCCCGCGCCCTGGGCCTTGTGGCCCTGGGTCACACATTGCCCCCAGCCCCTCTGGCAGAGCTGCCTCTACACGGACACATGATCGTCTTCCGTCTCAGCCTGGGTCTCACCATCCTTGCTTGTGAGAGCAGAGTCAGCGACCACATGGACCTGGGGCCCTCGGAGCTGGTGGGCCGCAGCTGCTATCAGTTTGTCCATGGACAGGATGCCACCAGGATCCGCCAAAGCCACCTGGACCTGCTGGACAAGGGCCAGGTGATGACTGGTTACTACCGCTGGCTGCAGCGCACAGGCGGGTTCGTGTGGCTGCAATCTGTGGCCACCGTGGCCGGGAGCGGGAAGAGCCCTGGGGAGCACCACGTGCTCTGGGTCAGCCATGTGCTCAGCCATGCTGAGGGTGGCCAGACCCCTCTGGACACCTTCCAGCTTCCAGCCAGTGCAGCCTGTGAGGGGGCGTCCAGCTCGGGGCCGGAGCCCACCGAGAGGGGTCCGCCGGCAGAGGGGAAGCAGGCTGCGCCCCCAGACCAGGATGATGCCCCCCAGGCCCGGGGCAAGTGCATCAAAGTGGAGCCGCGGGCGCGGGAAGCCAGAAGCTCCGAGGACAGTGAAGGCGAGGAAGCTGCCCAGCAGCCGCGCGCAACGCGGCAGCCCGGGTTCACCTCAGTCATCCGAGGCACGCTGCGGCCCTGGGACCCGGAGCCCCCGCGCGACCCACCGCCGCTGCCGCCAGCCCTGCTGCCCGCGGGCCTCCTGCCGCCCGTGGTGCGCAGCCTCTGCGCACCCGGCGCCATTCGCTACGCGCCCGCAGAGCTGGGCCTCGTGTGCCCGCGCCTGCCTGGAGCCCTCTGCCCTGCACTTGGCCTGCCCTGCCCGGGGCTCGGGCTCGCGGGCCCCAGGGCGCAGCACAAGGGGGACTGA

Related Sequences

XP_004867141.1 Protein

Npas1 PREDICTED: neuronal PAS domain-containing protein 1 [Heterocephalus glaber]

Length: 581 aa      View alignments
>XP_004867141.1
MATPYPGSEVKCGAGRGASVPWDFLPGLLVKAPPGPCLQAQRKEKSRNAARSRRGKENLEFFELSKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLGFAPGRRGQAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSVFDYIHPGDHTEVLEQLGLRARTPGPPTPPSVSSSSSSSSSSQADIPEIDASPAEAPPSARVQERSFFVRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDLLDKGQVMTGYYRWLQRTGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSHAEGGQTPLDTFQLPASAACEGASSSGPEPTERGPPAEGKQAAPPDQDDAPQARGKCIKVEPRAREARSSEDSEGEEAAQQPRATRQPGFTSVIRGTLRPWDPEPPRDPPPLPPALLPAGLLPPVVRSLCAPGAIRYAPAELGLVCPRLPGALCPALGLPCPGLGLAGPRAQHKGD