Details from NCBI annotation

Gene Symbol Slc6a16
Gene Name solute carrier family 6, member 16, transcript variant X2
Entrez Gene ID 101703471

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC6A16 ENSCPOG00000004148 (Guinea pig)

Gene Details

solute carrier family 6, member 16

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003742, Guinea pig)

Protein Percentage 70.52%
CDS Percentage 81.41%
Ka/Ks Ratio 0.50115 (Ka = 0.1854, Ks = 0.37)

SLC6A16 ENSG00000063127 (Human)

Gene Details

solute carrier family 6, member 16

External Links

Gene Match (Ensembl Protein ID: ENSP00000338627, Human)

Protein Percentage 37.88%
CDS Percentage 56.5%
Ka/Ks Ratio 0.65091 (Ka = 0.6573, Ks = 1.0098)

Slc6a16 ENSMUSG00000094152 (Mouse)

Gene Details

solute carrier family 6, member 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000136199, Mouse)

Protein Percentage 33.79%
CDS Percentage 50.28%
Ka/Ks Ratio 0.44282 (Ka = 0.8111, Ks = 1.8316)

Slc6a16 ENSRNOG00000025220 (Rat)

Gene Details

Transporter

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030009, Rat)

Protein Percentage 34.52%
CDS Percentage 50.8%
Ka/Ks Ratio 0.4371 (Ka = 0.8041, Ks = 1.8397)

Genome Location

Sequence Coding sequence

Length: 2175 bp    Location: 4857505..4869055   Strand: +
>XM_004866941.1
ATGCATTTGGCCCGCATGCGCAGTGCTGCCTCAGGGTCCAGCTGCAGTATCCGCTTTGGTACAGCTCTTTCACGGCCCACTTTTTTTCTGTTCTTTTTCAGCACACTCCTTGGCCATACTCACGTAGAGCATTTGAGGAGGCAGCGAAACAAGATCAGGATGGCGGGAGCACAGCGACAAGAGAAGAACATGGCCCCAGAAACGAGGTCTGCTCAGGAAGGGGATCCCTCCCTTGCAGCTCACAGAGGTACTCCTGACAGTCAGCCTGGGAGGGAGCCAGAGCCCCACACTTTGGAATCGGTGCTGGAAACAAGCTGGTCTAGTGAGTCCGAGCTTTCCCAGACTTACTCAGGACTCTCTGCCTCGGGACAAACATCAACCTCGTCTGAAATGATCTGGTCTTTGGGGCCTGAAGATTCACTGCCCCAGGTCTCGAATGCTCAGGCCTGGGAGATGTACACTTTAGAGACCCAGGCCAGGGCTGGACAACTGCACCAAAGTTCTGCAGTGGAGGTGACACCTGTCTCAGTCCTGAAGCCGAAACCCTCGAAGGAGAAGGAAGAACTGGCCAACAGAGAAGAAAGCGATGACTTCTTTGTTCGTCCGCTCTGGCCCAGGACGGTTGAGTACATCCTGACCCTGATGGGCTACATCGTGAAGCCAGCCAATATCTGGAGCTCTGTGTACCTGTGGCTTCACAAAGGAGGTGGCACCTTCTTCTTCATCTACACTGTCATCCTGCTGATTGTCGGGACCCCTCTGCTCTTCCTGGAGATGGCAGTTGGTCAGAGAATGCATCGGAACAGCATGGACACATGGCAGATCATTGCCCCTTGGGCTGGTGGCGTAGGCTACGCCAGCTTTATAGGCATGTTTATCTTGATGTCACTTTCCTATATCATCTTCTTCTGCTTCTTCATCTGGAGTCTACACCTGGAAGGGGCAAAATACGGCCTTAAACATTTGCTAGCTGCCAAGATGTCGGCTGTGTATGACCTGAGTGTGTGGTCGGTAGCAGGAGGCCAAGTTTTGTTTGATCTGGGCCTAGGCTTTGGCCCCATTGCCTCCTTATCCTCCCACATGCCCCAGTCCAACAACTGTCTCGGCGATGCCTTTGTCATGGCTCTGATCTACCTGGTCACCTTGCTCTTCATGACACCTTTCATCCTCGCCCTCCTGGGCTTCTGGGCTACAGTCCTCACACATCGCTGCACTGAGAAGAACATGGAAATGCTGTTGATGCTGGTGAACATGGGGATACTGCCTCCTGAGGCTAAGCCCCCTGATGACCTGAACAACGACCCCACCTCCACCTACAGCTCCTGGCTTAGCGGCCTCGCCCAGGATATCAAGAGCCTGGTGCTCAGCAAGGTGTCCAAGTGTGACAGAGAGTTGAGGATTCTGCAGGCTAAGGAGGGCCCAGGCTTTGTATTCCTGTCCTTTGCTGAAGCCGTATCCTTCCTTCCTCGGTCAATCTTCTGGTGCATCCTCTTCTTCTTGATGCTGCTGTTGCTAAGCTTGAGCACCACGATAGGATTCATGCAAGGCCTCATTATCCCGCTCCAGGACCCCTCCTCTTTCCTCAGAAAACAAACCAAGCTGCTCACAGGGAGCATCTCTATGCTGCTGTTCCTATGTGGTCTGTACTTCACTCGTCCCCCTGGCGTTTACATCATCAAGCTGGTGAGGGAATACTGGACCCCCATGCCCATCATCTTCATCATCATCTGTGAAAACATTGCCGTGGCCTGGGCCTTCAGGGCCAAGAGGTTTCTTGGAGACCTGATGAACCTGGCGCAGGGCTTCACCCTCCGCTTCTACAGCTGGGTGTGGAGCTACTTGACTCCGGTCATGCTGCTCGTCATGTTTGTAGCCCTCCTGGTTCAGCGCTGTGTGAAGCCCATCACCTACCTGGCCTGGGACTCAAGCAATTCTACAGAGGTGACTCGAGAGTACCCGTCGTGGGCGCTGCTCTTGATGATCATACTTCTCCTCATTGTCATCGCTCCCATCCCTGTGTACCTCTTCTACGGCCTCGCCCACGGGATTCCCTTCAGGCCCAGTGGTGGGGACAAGCGTGGAAAATCCTCCACACCCCTGCGTCAGGGGAACCAGATGATGCCGGGTAAGGAGGCCCAAGAGAAAGAAGTTCACCAAGATAATAAAGGGACGTGA

Related Sequences

XP_004866998.1 Protein

Slc6a16 PREDICTED: orphan sodium- and chloride-dependent neurotransmitter transporter NTT5-like isoform X2 [Heterocephalus glaber]

Length: 724 aa      View alignments
>XP_004866998.1
MHLARMRSAASGSSCSIRFGTALSRPTFFLFFFSTLLGHTHVEHLRRQRNKIRMAGAQRQEKNMAPETRSAQEGDPSLAAHRGTPDSQPGREPEPHTLESVLETSWSSESELSQTYSGLSASGQTSTSSEMIWSLGPEDSLPQVSNAQAWEMYTLETQARAGQLHQSSAVEVTPVSVLKPKPSKEKEELANREESDDFFVRPLWPRTVEYILTLMGYIVKPANIWSSVYLWLHKGGGTFFFIYTVILLIVGTPLLFLEMAVGQRMHRNSMDTWQIIAPWAGGVGYASFIGMFILMSLSYIIFFCFFIWSLHLEGAKYGLKHLLAAKMSAVYDLSVWSVAGGQVLFDLGLGFGPIASLSSHMPQSNNCLGDAFVMALIYLVTLLFMTPFILALLGFWATVLTHRCTEKNMEMLLMLVNMGILPPEAKPPDDLNNDPTSTYSSWLSGLAQDIKSLVLSKVSKCDRELRILQAKEGPGFVFLSFAEAVSFLPRSIFWCILFFLMLLLLSLSTTIGFMQGLIIPLQDPSSFLRKQTKLLTGSISMLLFLCGLYFTRPPGVYIIKLVREYWTPMPIIFIIICENIAVAWAFRAKRFLGDLMNLAQGFTLRFYSWVWSYLTPVMLLVMFVALLVQRCVKPITYLAWDSSNSTEVTREYPSWALLLMIILLLIVIAPIPVYLFYGLAHGIPFRPSGGDKRGKSSTPLRQGNQMMPGKEAQEKEVHQDNKGT