Sequence details NCBI ID: XM_004866930.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Aldh16a1
Gene Name aldehyde dehydrogenase 16 family, member A1, transcript variant X1
Entrez Gene ID 101700529

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ALDH16A1 ENSCPOG00000002850 (Guinea pig)

Gene Details

aldehyde dehydrogenase 16 family, member A1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002592, Guinea pig)

Protein Percentage 86.07%
CDS Percentage 87.44%
Ka/Ks Ratio 0.23402 (Ka = 0.0801, Ks = 0.3421)

ALDH16A1 ENSG00000161618 (Human)

Gene Details

aldehyde dehydrogenase 16 family, member A1

External Links

Gene Match (Ensembl Protein ID: ENSP00000293350, Human)

Protein Percentage 78.93%
CDS Percentage 82.5%
Ka/Ks Ratio 0.24592 (Ka = 0.1277, Ks = 0.5192)

Aldh16a1 ENSMUSG00000007833 (Mouse)

Gene Details

aldehyde dehydrogenase 16 family, member A1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000007977, Mouse)

Protein Percentage 77.18%
CDS Percentage 78.3%
Ka/Ks Ratio 0.21479 (Ka = 0.1522, Ks = 0.7085)

Aldh16a1 ENSRNOG00000020623 (Rat)

Gene Details

aldehyde dehydrogenase 16 family, member A1 (Aldh16a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027992, Rat)

Protein Percentage 75.81%
CDS Percentage 77.47%
Ka/Ks Ratio 0.2413 (Ka = 0.1691, Ks = 0.7006)

Genome Location

Sequence Coding sequence

Length: 2415 bp    Location: 4758365..4745000   Strand: -
Raw sequence   
>XM_004866930.1
ATGGCGGAGACACACGCAAGGCCCAGCGTCCGCGAGATCTTCTCCACTCTGGAGTACGGACCCGCGCCGGAGAGCCACGCATGCGCACTGGCCTGGCTGGATGCCCAAAACCGCCTCTTGGGCCACTATGTAAATGGGAAGTGGCTAAAGCCAGAACACAGGAATTCAGTGCCTTGCCAGGACCCCGTCACAGGAGAGAATTTGGCCAATTGCCTCCTGGCAGAGCCTGATGATGTGGCTGCAGCAGTGAAGGCAGCCTTGGATGCACGGGGAAGCTGGAGTGGAGTCCCCGGAGGCGAGCGGGCCCAGCACCTGACCAGGCTGGCCAAGATGATCCAGAAGCACCAGCAGCTTCTGTGGACCCTGGATTCCCTGCTCACTGGGCGGGCCATTCGGGAAGTTCGCAGTGGGGATGTCCCACTGGCCCAGCAGCTGCTGCAGTACCATGCAGTCCAAGCTCATGTCCAGGAAGAGGTACTGGCAGGCTGGAAGCCCATGGGTGTTATTGGCCTCATCTTACCACCCACGTTCTCCTTCCTAGAGATGATGTGGAGAATTTGCCCTGCCCTGGCAGTGGGCTGCACCGTGGTGGCCATTGTACCCCCAGGCTCCCCAAGCACCCTCCTCCTGGCCCAGCTGGCAGGGGGCCTTGGCACATTCTGCGGGATCCTCAATGTGATTGTTGGCCCTGCCTCCCTGGGGCCCACTCTGGGCCGATGTCCTGGAGTGCAGAAGGTGGCCTTCTGTGGAGCTGCAGAGGAAGCGCGTGTCCTGCGGCAGAGCCTGGCTGGCCACAGGCTGGAGCTGAGTCTGGCGCTGGACTTGGAATCACTACTGCTGGTCATGGACTCAGCCGACCTGGACTCAGCCGTGGAGGGCGTTGTGGATGCAGCCTGGTCTGACCGCAGCCCGGGCGGCCTCCGGCTCCTGGTCCAAGAATCTGTGTGGGAGGAAACCATGAGGCGACTCCAATCGAGGATGAGGCGGCTGCGGAGTGGCCCAGGCCTGGACGGGGCCGTGGACATGGGGACCCGAGGGGCTGCTGCCTGTGATGTGGCCCAGCGCTGTGTGCAGGAGGCCAGGAGTCAGGGTGCAGAGGTGTTCCAGGCTGTCACTGTGCCCTCAGGTGGCCCACTCTTTCCCCCAACATTGGTCTCTGGCCTGCCCCCCGCCGCACCATGTGCCCAGGCAGAAGTCCCGTGGCCGCTGGTCATGGCCTCCCCTTTCCGCACAGCCAAGGAGGCGCTGGCCATGGCCAACAGCACACCTCGGGGAGGCAGCGCCAGTGTGTGGAGCGAGAGGCTGGGGCAGGCGCTGGAGCTGGCCTATGGGCTCCGGGTGGGCACAGTCTGGATCAACACCCATGGCCTCAGAGACCCTGCAGTGCCCATAGGTGGCTGCAAGGAGAGTGGGTCTTCCTGGCACGGGGGCCTGGATGGTCTGTATGAGTACCTGCAGCCCTCGGGGACCCCTGGCCAGCTGCCTTTTGTTTTTGAGCATCTGAACTATGACAGCTTCGGCCTTGCCTTACCCACAGCCCTGCCAGCATGGCCCGAAACAGGGCCCAGCCCAGTGCCTCCCTATGGGCTCTTTATCCGGGGCCGATTCCAGCCTTCGGGAGCCGGGAGCTCTAGGCCCATCTGGGATTCTTCTGGCAAACTCCATGGCTACGTGGCTGAGGGTGCAGCTGAGGATGTGCGAGGCGCTGTGGAAGCCGCTCACCAGGCTGCCACTGGCTGGGAGCGTCAGTCCCCAGGGGCCCGGGCGGCCCTGCTGGTGGCGCTGGCAGCTGCGCTGGAGCACAGGGGACCCGGCCTGGCCTCGAGGCTGCAGCGGCATGGAGTGGAGCTCGAGGCTGCCAAGGTGGAGGTGGAGCTCAGCGCCAGGCGACTCCGGGCGTGGGCAGCCCAGGCCCAGGCCCAAGCCCAGGGCCACACCCTGCAGGTAGCAGGGCTCAGAGGCCCTGTGCTCCGCCTTCGGGAGCCACTGGGTGTGCTGGCAGTCGTGTGCCCTGACGAGTGGCCTCTGCTCGCCTTCGTGTCCCTGCTGGCCCCTGCCCTGGCGCACGGCAACACTGTGGTCTTGGTGCCCAGCGGGACCTGTCCCCTGCTGGCCCTGGAGATCTGCCAGGATGTGGCCTCGCTGTTCCCCGCTGGACTGGTGAACGTAGTGACAGGAGATCGTGACCACCTGACGCGCTGCCTGGCCTTGCACCAGGATGTCCAGGCGCTGTGGTATTTCGGATCTGCAGAGGGCTCCCAGTTCGTGGAGTGGGCCTCGGCGGGAAACCTCAAGCCTGTGTGGGTGAACAGTGGATGCCCAAGGGCCTGGGAGCAGGAGCCCCAGGGGGCAGGCCCAGAGCTGAGGCTGCGGGCAGCACGGACCAAGGCCCTGTGGCTGCCCATGGGGGACTAA

Related Sequences

XP_004866987.1 Protein

Aldh16a1 PREDICTED: aldehyde dehydrogenase family 16 member A1 isoform X1 [Heterocephalus glaber]

Length: 804 aa      View alignments
>XP_004866987.1
MAETHARPSVREIFSTLEYGPAPESHACALAWLDAQNRLLGHYVNGKWLKPEHRNSVPCQDPVTGENLANCLLAEPDDVAAAVKAALDARGSWSGVPGGERAQHLTRLAKMIQKHQQLLWTLDSLLTGRAIREVRSGDVPLAQQLLQYHAVQAHVQEEVLAGWKPMGVIGLILPPTFSFLEMMWRICPALAVGCTVVAIVPPGSPSTLLLAQLAGGLGTFCGILNVIVGPASLGPTLGRCPGVQKVAFCGAAEEARVLRQSLAGHRLELSLALDLESLLLVMDSADLDSAVEGVVDAAWSDRSPGGLRLLVQESVWEETMRRLQSRMRRLRSGPGLDGAVDMGTRGAAACDVAQRCVQEARSQGAEVFQAVTVPSGGPLFPPTLVSGLPPAAPCAQAEVPWPLVMASPFRTAKEALAMANSTPRGGSASVWSERLGQALELAYGLRVGTVWINTHGLRDPAVPIGGCKESGSSWHGGLDGLYEYLQPSGTPGQLPFVFEHLNYDSFGLALPTALPAWPETGPSPVPPYGLFIRGRFQPSGAGSSRPIWDSSGKLHGYVAEGAAEDVRGAVEAAHQAATGWERQSPGARAALLVALAAALEHRGPGLASRLQRHGVELEAAKVEVELSARRLRAWAAQAQAQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLAPALAHGNTVVLVPSGTCPLLALEICQDVASLFPAGLVNVVTGDRDHLTRCLALHQDVQALWYFGSAEGSQFVEWASAGNLKPVWVNSGCPRAWEQEPQGAGPELRLRAARTKALWLPMGD