Details from NCBI annotation

Gene Symbol Pnkp
Gene Name polynucleotide kinase 3'-phosphatase
Entrez Gene ID 101712591

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNKP ENSCPOG00000005127 (Guinea pig)

Gene Details

polynucleotide kinase 3'-phosphatase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004613, Guinea pig)

Protein Percentage 90.1%
CDS Percentage 87.24%
Ka/Ks Ratio 0.09675 (Ka = 0.0526, Ks = 0.5432)

PNKP ENSG00000039650 (Human)

Gene Details

polynucleotide kinase 3'-phosphatase

External Links

Gene Match (Ensembl Protein ID: ENSP00000323511, Human)

Protein Percentage 86.76%
CDS Percentage 86.24%
Ka/Ks Ratio 0.1079 (Ka = 0.0657, Ks = 0.6093)

Pnkp ENSMUSG00000002963 (Mouse)

Gene Details

polynucleotide kinase 3'- phosphatase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003044, Mouse)

Protein Percentage 81.54%
CDS Percentage 80.38%
Ka/Ks Ratio 0.11534 (Ka = 0.1042, Ks = 0.9036)

Pnkp ENSRNOG00000020318 (Rat)

Gene Details

polynucleotide kinase 3'-phosphatase (Pnkp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039388, Rat)

Protein Percentage 80.77%
CDS Percentage 80.06%
Ka/Ks Ratio 0.11732 (Ka = 0.1071, Ks = 0.9129)

Genome Location

Sequence Coding sequence

Length: 1584 bp    Location: 4462688..4467678   Strand: +
>XM_004866865.1
ATGGCGGAGGTAGAGGCCCAGGGTCACCTGTGGCTGGAGAGCCCTCCTGGGGGAGCGCCTCCTATCTTCCTTCCCTCGGACGGGCAAACCCTGGTCTTGGGCCGGGGACCCCTGACCCAGGTCACGGACCGGAAGTGCTCCAGGAACCAAGTGGAGCTGGTTGCAGACCCTGAGACTCGGACGGTAGCAGTGAAACAGCTGGGCGTTAACCCTTCTACTGCTGGGACTCAGGAGCTGAAGCCCGGTTTGGAGGGCTCTCTAGGGGTGGGGGACACACTGTATTTGGTCAATGGCCTGCACCCACTGACCCTGCGCTGGGAAGAGACCCCTACACCAGGATCCCAGCCAGACATTCCACCTGGCACCCCTCTGGTGACTCCAGACAAGGAGAGGAAGGAGGAGGAGGAGGAGGATGCTGAGCCCCAGAAAAAGAGGATGCGGAAGTCATCTCCTGGCTGGGAGAACTTGGAGAAGCTGCTGGTGTTCGTAGCCCCTGGGGTGAAGCCCCGGGGCAAGGTGGCTGCCTTTGATCTGGATGGGACCCTAATCACCACCCGCTCTGGGAAGGTCTTCCCCACGGGCCCCAGTGACTGGAGGATCTCATACCCAGAGGTTCCCAGGAGGCTCCAGCAGCTGGATACCCAGGGCTACAAGCTGGTGATCTTCACGAACCAGATGGCCATTGGCCGAGGGAAGCTGCGAGCAGAGGATTTCAAGGCCAAGGTGGAGGCTGTGGTAGAAAAGCTGGGGGTCCCCTTGCAGGTACTGGTGTCCACGCATGCGGGCCTGTGCCGGAAGCCGCTGACGGGCATGTGGGAGCATCTGCAGGAGCAGGCCAACGAGGGCATGCCCATCTCCCTCGGCGACAGCATCTTCGTGGGAGATGCCGCGGGCCGCCCGGCCAACTGGGCACCTGGGCGGAAGAAGAAAGACTTCTCTTGTGCCGACCGCCTGTTTGCCCTCAACCTTGGCCTGCCCTTTGCCACGCCTGAAGAGTTCTTCCTCAAGTGGCCAGTGGCCCGATTCGAGCTCCCGGCTTTCGACCCGAGGACCGTCTCCCGCGCAGGGCCGCTCTGCCTACCCGAGACTAGCTCCCTGCTGAACTCAGACCCAGAAGTGGTCGTCGCCGTGGGATTCCCCGGGGCCGGCAAGTCCACATTCCTCAAGGAGCACCTGGTGTCCGCCGGCTACGTGCACGTCAACAGGGACACGCTGGGCTCGTGGCAGCGCTGCGTGAGCGCGTGTGAGGCGGCTCTGAAGCAGGGGAAACGGGTGGCCATCGACAACACAAACCCAGACGCTGCGAGCCGGGCCAGGTACATCCAGTGCGCCAGAGACGCGGGTGCGCCCTGCCGCTGCTTCCTCTTTGCAGCCACACTGGAGCAGGCGCGCCACAACAACCGGTTCCGCGAGCTGACCGGTTCCTCTCACGCACCCGTGTCCGACGTGGTCATGTTCGGCTACAGGAAGCAGTTCGAGGCCCCGGCGCTCGCCGAAGGCTTCTCTGAGATCCTGAAGATCCCGTTCCGGCTGCAGTTGGAGCCGCCGTTGGAGAGGCTGTACCGCCAGTTCTCCGAGGGCTGA

Related Sequences

XP_004866922.1 Protein

Pnkp PREDICTED: bifunctional polynucleotide phosphatase/kinase [Heterocephalus glaber]

Length: 527 aa      View alignments
>XP_004866922.1
MAEVEAQGHLWLESPPGGAPPIFLPSDGQTLVLGRGPLTQVTDRKCSRNQVELVADPETRTVAVKQLGVNPSTAGTQELKPGLEGSLGVGDTLYLVNGLHPLTLRWEETPTPGSQPDIPPGTPLVTPDKERKEEEEEDAEPQKKRMRKSSPGWENLEKLLVFVAPGVKPRGKVAAFDLDGTLITTRSGKVFPTGPSDWRISYPEVPRRLQQLDTQGYKLVIFTNQMAIGRGKLRAEDFKAKVEAVVEKLGVPLQVLVSTHAGLCRKPLTGMWEHLQEQANEGMPISLGDSIFVGDAAGRPANWAPGRKKKDFSCADRLFALNLGLPFATPEEFFLKWPVARFELPAFDPRTVSRAGPLCLPETSSLLNSDPEVVVAVGFPGAGKSTFLKEHLVSAGYVHVNRDTLGSWQRCVSACEAALKQGKRVAIDNTNPDAASRARYIQCARDAGAPCRCFLFAATLEQARHNNRFRELTGSSHAPVSDVVMFGYRKQFEAPALAEGFSEILKIPFRLQLEPPLERLYRQFSEG