Details from NCBI annotation

Gene Symbol Shank1
Gene Name SH3 and multiple ankyrin repeat domains 1, transcript variant X2
Entrez Gene ID 101720175

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6435 bp    Location: 3932308..3978630   Strand: +
>XM_004866790.1
ATGACCCACAGCCCCGCGACAAGCGAGGACGAGGAACGCCACAGTGCCAGCGAGTGTCCCGAGGGGGGCTCAGCGTCCGACAGCTCCCCAGACGGGCCAGGGCGAGGCCTCCGGGGGACCCGGGGCCAGGGCAGTGGGGCACCTGGTAACCTGGCCTCGGCCCGAGGCCTCCAGGGCCGCTCCATGTCTGTCCCTGACGACGCCCACTTCAGCATGATGGTCTTCAGGATTGGCATCCCGGACCTGCACCAGACAAAATGCCTGCGCTTCAACCCCGATGCCACCATCTGGACAGCCAAGCAGCAGGTGCTCTGCGCCCTGAGCGAGAGCCTGCAGGACGTGCTCAACTACGGCCTCTTCCAGCCGGCCACCTCCGGCCGCGACGCCAACTTCCTGGAGGAGGAGCGGCTGCTACGGGAGTACCCCCAGTCCTTCGAGAAGGGGGTCCCCTACCTGGAGTTCCGATACAAGACCCGAGTTTACAAACAGACCAACCTGGACGAGAAGCAGCTGGCCAAGCTGCACACGAAGACAGGGTTGAAGAAGTTCCTGGAGTATGTGCAGCTCGGGACGTCTGACAAGGTGGCGCGACTGCTGGACAAGGGGCTGGACCCCAACTACCACGACTCGGATTCGGGAGAGACCCCCTTGACTCTAGCGGCCCAGACTGAAGGCTCTGTAGAGGTGATTCGAACTCTGTGCCTGGGTGGAGCCCACATTGACTTCCGGGCCCGGGATGGCATGACAGCGCTGCACAAGGCCGCGTGTGCCCGACACTGCCTGGCGCTCACGGCACTCCTGGACCTCGGGGGATCCCCCAACTACAAGGACCGCCGGGGCCTAACCCCTCTGTTCCACACCGCCATGGTGGGGGGGGACCCCCGCTGCTGCGAGCTGCTTCTGTACAACAGAGCCCAGCTGGGCATAGCAGACGAGAATGGCTGGCAGGAGATTCACCAGGCCTGTCAGCGGGGCCACTCTCAGCACCTGGAGCACCTGCTCTTCTACGGGGCTGAGCCTGGAGCCCAGAATGCCTCGGGGAACACGGCCCTGCACATCTGTGCTCTCTACAACAAGGAGACCTGCGCCAGGATCCTCCTGTATCGAGGGGCCAACAAGGATGTGAAGAATAATAGCGGACAGACACCCTTTCAGGTGGCAGTGATTGCTGGGAACTTCGAGCTAGGGGAGCTCATCCGGAACCATCGGGAGCAGGATGTGGTGCCCTTTCAGGAGTCCCCAAAGTACGCGGCTCGGCGACGGGGACCCCCAGGGGCAGGGTTGACAGTGCCCCCTGCGCTGCTCAGGGCCAACAGCGACACCAGCATGGCGCTGCCCGACTGGATGGTGTTCTCTGCCCCGGGGCCCTCACCCTCCGGGGCCCCGGGCCCTACCTCAGGGCCCCAGGTCCAGTCACAGCCCTCAGCCCCCAGCACCAAGCTCAGCAGCGGGACCCTCCGAAGTGCCAGCAGCCCTCGGGGCGCCAGGGCCCGGTCCCCATCCCGAGGGAGGCACCCCGAGGATGCCAAGAGGCAACCCCGAGGACGGCCCAGCTCCAGCGGGACGCCCCGGGAAGGGCCTGCCGGGGGAACGGGGGGCTCCGGGGGTCCTGGGGGCTCCCTGGGCAGCCGAGGCCGAAGGAGGAAACTCTACTCAGCAGTCCCTGGACGCTCCTTCATGGCTGTGAAGTCGTACCAGGCCCAAGGCGAGGGCGAGATCTCCCTGAGCAAGGGCGAGAAGATCAAAGTGCTCAGCATCGGGGAAGGAGGCTTCTGGGAAGGGCAGGTCAAAGGTCGAGTAGGCTGGTTCCCCTCTGACTGCCTGGAAGAGGTGGCAAACCGCTCCCAGGAGGGAAAGCAAGAGAGCCGCAGCGACAAGGCAAAGAGACTCTTCCGACATTATACCGTGGGCTCCTACGACAGCTTCGATGCCCCAAGCTTGATGGATGGGATTGGCCCAGGGAGCGATTACATCATTAAGGAGAAAACAGTCTTGCTGCAGAAGAGGGACAGCGAGGGGTTTGGGTTCGTGCTCCGGGGGGCCAAGGCGCAGACCCCCATCGAGGAGTTCACCCCTACCCCGGCCTTCCCGGCGCTGCAGTACCTCGAGTCCGTGGACGAGGGGGGCGTGGCATGGCGGGCTGGACTGCGAATGGGAGACTTCCTCATCGAGGTGAACGGGCAGAATGTGGTGAAGGTCGGCCACCGCCAGGTGGTGAACATGATCCGCCAAGGGGGCAACACGCTCATGGTGAAGGTGGTGATGGTCACCAGGCACCCGGACATGGACGAGGCCGTCCACAAGAAAGCACCCCAGCAGGCGAAGCGGCTCCCGCCCCCAGCGATCTCCCTGCGCTCCAAGTCAATGACCTCCGAGCTGGAGGAAATGGTCTCCCCCTGGAGGAAGAAGAGCGAGTATGAGCAACCTCCTACGCCGGTGCCCAGCATGGAGAAAAAGCGGACAGTGTATCAGATGGCTCTCAACAAACTGGACGAGATACTGGCTGCAGCCCAGCAGACTATCAGCGCGAGCGAGAGCCCTGCGCCGGGAGGCCTGGCGTCCCTGGGCAAGCACCGGCCCAAAGGCTTTTTCGCCACCGAGTCAAGCTTCGATCCCCATCACCGCTCCCAGCCAAGTTACGAGCGCCCTTCCTTCCTGCCTCCTGGACCTGGGCTCATGCTCCGACAAAAATCTATCGGGGCTGCAGAGGATGACAGACCGTACCTAGCACCCCCAGCCATGAAGTTCAGCCGCAGCCTGTCTGTGCCGGGCTCGGAGGACATCCCCCCGCCGCCCACCACGTCCCCACCAGAGCCCCCGTACAGCACACCCCCGGCCCCCTCCTCCTCGGGCCGCCTCACCCCGTCCCCGCGGGGAGGCCCCTTCAACCCCGGCTCCGGGGGACCCCTCCCCGCCTCCTCCCCAGCGTCCTTTGACGGCCCCTCCCCTCCCGACACGCGCGTGGGGGGCCGGGACAAGAGCCTGTACCACGGTGGCCCCTTGCCCCCTGCGCACCACCACCACCACCACCACCACCACCACCACGCGCACCCGCCGCACCCGCCCGAGATGGAGACGGGCGCCCCCGACGACGCCCCGCCACGCCTGGCTCTGGGGCCCCAGCCCAGCCTGCGGGGCTGGAGGGGCGGCGGGCCCAGCCCGAGCCCGGGGGCGCCCTCACCGTCGCACCACGCGGGGGCTGGCGCCGGGGGCGCCCCGCAAGCCCCGGCCCTGCGCTACTTCCAGCTGCCGCCGCGCGCCGCTAGCGCCGCCATGTACGTGCCCGCGCGCTCCGGCCGCGGCCGCAAGGGGCCGCTGGTCAAGCAGACCAAGGTGGAGGGCGAGCCGCACAAGGGCGCCCTGCCTCCCGCCGCGCCCGGGTCCCCCGCGTCGCCGCAGCCGCTGCCCCCCGCGCCCGCGCCGGCCGAGAAGAACTCCATCCCCATCCCCACCATCATCATCAAGGCTCCGTCCACCAGCAGCAGCGGCCGCAGCAGCCAGGGCAGCAGCACCGAGGCCGAGCCGCCCACCCAGCCCGAGACCCCCGCAGGCGGCGGGGGCTCGTCATCCAGCCCAGCGCCGCCCCTGTCGCCCGTGCCGCCCTCGCCGTCGCCCGTGCCCACGCCCGCGTCGCCCAGCGGCCCGGCCACCCTGGACTTCACCAGCCAGTTCGGGGCGGCGCTGGTGGGCGCGGCGCGCAGGGATGGCGGCTGGCAGAACGAGGCCCGCCGGCGCTCCACGCTCTTCCTTTCCACGGACGCGGGAGACGAGGAAGGCGGCGAAGGCGGGCTGGGCGCCGGGGCCACCCCGGGCCCGCGGCTGCGCCACTCCAAGTCCATCGACGAGGGCATGTTCTCCGCCGAGCCCTACCTCCGCCTGGAGTCTGCGGGCGGCTCGGGGAGCTCCGGCTACGCGGGCTACTCGGCGGGCGCACGCGCCTACGCGGGCAGCGGGGCCAGCAGCGCCTTCTCCAGCTTCCTGCCCCCGCGGCCCCTGCTGCACCCGCTCACCGGCAAGGCCCTGGACCCGGCCTCCCCGCTCGGGCTGGCGCTGGCCGCCCGTGAGCGCGCGCTGAAGGAGTCCTCAGAGGGCGGCGGCGCCCCCCAGCCCCCGCCCCGCCCCCCCTCGCCCCGCTACGACGCGCCGCCGCCCACCCCGCATCACCACTCGCCCCACGCGCACCACGAGCCCGTGCTGCGCCTCTGGGGGGCGCCGCCGCCCGACCCCCCGCGCCGGGAGCTGGGCTACCGAGCGGGGCTGGGCGGGCCAGAGAAGCCGCTCCCCGCCAGCCCACCCGCCGCGCGGCGCTCGCTGCTGCACCGCCTGCCGCCCACGGCGCCCGGCGTGGGGCCCCTGCTGCTGCAGCTGGGGCCCGAGCCTCCCGCCCCACACCCCGGGGTCAGCAAGGCCTGGAGGTCTGGAGGCGCGGAGGAGCCTGAGCGGCTACCCCTCCACGTGCGCTTCCTCGAGAACTGTCAGCCGCGCGCCAGGCCGGCGGCGGTCTCCAGGGGGCCCTCGGCGGAGGATGGGCCCGGGGTCCCGCCGCTCAGCCCGCGCCGCTCCGTGCCCGCCTGTCCCACGTCCCCGCGGGGCGGCGAGGAGAATGGGCTCCCTCTGCTCGTGCTGCCGCCGCCGGCCCCGTCGGTGGACGCGGACGACGGTGACTTCCTCTTTGCGGAGCCGCTTCCCCCACCCCTCGAGTTTTCCAACAGCTTCGAGAAGCCGGAGTCGCCCCTCACGCCGGGCCCCCCCCAGCCGCTCCCGGACCCCCCTGCTCCAGTCACCCCCCTGCCCCCCGTGCCCCCCCCGGCGGCAGCCGCCCCTGGCCCGCCCGCCCTGGACTCCACTGCATCCAGCCTGACGTCCTATGACAGCGAGGTGGCCACGCTCACTCAGGGGCCCCCCGCGGCTCCCGGGGACCACCCCACCCCAGGCCCGCCGGCCCCAGCGGCCCCAGCGCCCCCCGCCCCGCAGCCGGGCCCAGATCCGCCACCGGGCACGGACTCCGGGATCGAGGAGGTGGACAGTCGCAGCAGCAGTGACCACCCCTTGGAGACCATCAGCAGCGCGTCCACGCTGAGCAGCCTGTCTGCCGAGGGCGGGGGCGGGGTGGCCAGCGGGCCTGAGCTGCTGGACACCTACGTGGCCTACTTGGACGGCCAGGCCTTCGGGGGCAGCGGGCCGCCGTATCCCCCGCAGCTCACGACTCCCTCGAAGCTCCGAGGCCGGGCGCTGGGGGCAGCCGGAGGCCTTCGACCCGGCCCCAGTGGCGGGCTCCGAGACCCTGTCACCCCCACCAGCCCCACGGTCTCTGTGACTGGGGCCGGAAACGACGGGCTGCTGGCCCTGAGCGCCTGTTCGGGGCCCTCTTCGGCAGGCGTGGCCGGGGGCCCGGTATCGGTGGAGCCGGAAGTCCCCCCGGTGCCCTTGCCTGCCGCCGCCTCCCTGCCTCGGAAGCTACTGCCCTGGGAGGAGGGCCCGGGCCCGCCACCACCACCCCTGTCTGGGCCCCTGTCCCAGCCTCAGGCCTCCGCCTTGGCCACCGTCAAAGCCAGCATCATCAGCGAACTCAGCTCCAAGCTCCAGCAGTTCGGGGGCTCCTCAGCAGCTGGAGGGGCTCTGCCTTGGGCCCGGGGAGGCAGCGGGGGCACTGGGGACAGCCACCACGGTGGAGCCGGCTACGTCCCCGAGAGGACCTCCTCCCTGCAGCGGCAGAGGCTCTCCGACGACTCCCAGTCCTCGCTCCTCCCCAAGCCCGTGGGCAGCCTGTTTCAGAACTGGCCCAAGCCACCTCTGCCGCCACTCCCCACTGGATCCGGGGTGTCGCCTTCAGCCACTGCACCCCCGGGGGCCATCTCACCTTCTGCTTCCTCCTCCTCCACCTCCTCCCGCCACCTCCAGGGCGTAGAGTTCGAGATGCGGCCCCCCCTGCTCCGCCGGGCCCCCAGCCCCTCGCTGCTGCCCGCCTCGGAGCACAAGGTCAGCCCAGCACCCAGGCCCTCGTCCCTGCCCATCCTGCCTTCAGGCCCTCTCTACCCGGGCCTCTTCGACATCCGCGGCTCCCCCACCGGTGGGGCGGGGGGCTCCGCGGACCCCTTCGCCCCTGTCTTCGTGCCGCCGCACGCGGGGATGTCCGGGGGCCTGGGAGGAGCCTTGTCGGGGGCCTCTCGCTCCCTGTCGCCCACCCGCCTGCTGTCGCTGCCCCCGGACAAACCGTTTGGCGCCAAACCTCTGGGCTTCTGGACCAAGTTCGATGTGGCCGACTGGCTAGAGTGGCTGGGCCTGGCCGAGCACCGGGCCCGCTTCCTGGACCACGAGATCGACGGCTCCCACCTGCCCGCCTTGACCAAGGAGGACTATGTGGACCTGGGGGTCACCAGGGTGGGCCACCGCATGAACATCGACCGGGCTCTCAAGTTTTTCCTGGAGAGGTGA

Related Sequences

XP_004866847.1 Protein

Shank1 PREDICTED: SH3 and multiple ankyrin repeat domains protein 1 isoform X2 [Heterocephalus glaber]

Length: 2144 aa     
>XP_004866847.1
MTHSPATSEDEERHSASECPEGGSASDSSPDGPGRGLRGTRGQGSGAPGNLASARGLQGRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARRRGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGPSPSGAPGPTSGPQVQSQPSAPSTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRVGWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIKEKTVLLQKRDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPAISLRSKSMTSELEEMVSPWRKKSEYEQPPTPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPAPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSFLPPGPGLMLRQKSIGAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGGRDKSLYHGGPLPPAHHHHHHHHHHHAHPPHPPEMETGAPDDAPPRLALGPQPSLRGWRGGGPSPSPGAPSPSHHAGAGAGGAPQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPHKGALPPAAPGSPASPQPLPPAPAPAEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPETPAGGGGSSSSPAPPLSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARRDGGWQNEARRRSTLFLSTDAGDEEGGEGGLGAGATPGPRLRHSKSIDEGMFSAEPYLRLESAGGSGSSGYAGYSAGARAYAGSGASSAFSSFLPPRPLLHPLTGKALDPASPLGLALAARERALKESSEGGGAPQPPPRPPSPRYDAPPPTPHHHSPHAHHEPVLRLWGAPPPDPPRRELGYRAGLGGPEKPLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKAWRSGGAEEPERLPLHVRFLENCQPRARPAAVSRGPSAEDGPGVPPLSPRRSVPACPTSPRGGEENGLPLLVLPPPAPSVDADDGDFLFAEPLPPPLEFSNSFEKPESPLTPGPPQPLPDPPAPVTPLPPVPPPAAAAPGPPALDSTASSLTSYDSEVATLTQGPPAAPGDHPTPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGVASGPELLDTYVAYLDGQAFGGSGPPYPPQLTTPSKLRGRALGAAGGLRPGPSGGLRDPVTPTSPTVSVTGAGNDGLLALSACSGPSSAGVAGGPVSVEPEVPPVPLPAAASLPRKLLPWEEGPGPPPPPLSGPLSQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGTGDSHHGGAGYVPERTSSLQRQRLSDDSQSSLLPKPVGSLFQNWPKPPLPPLPTGSGVSPSATAPPGAISPSASSSSTSSRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHAGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER