Details from NCBI annotation

Gene Symbol Shank1
Gene Name SH3 and multiple ankyrin repeat domains 1, transcript variant X1
Entrez Gene ID 101720175

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6435 bp    Location: 3936911..3978630   Strand: +
>XM_004866789.1
ATGACCCACAGCCCCGCGACAAGCGAGGACGAGGAACGCCACAGTGCCAGCGAGTGTCCCGAGGGGGGCTCAGCGTCCGACAGCTCCCCAGACGGGCCAGGGCGAGGCCTCCGGGGGACCCGGGGCCAGGGCAGTGGGGCACCTGGTAACCTGGCCTCGGCCCGAGGCCTCCAGGGCCGCTCCATGTCTGTCCCTGACGACGCCCACTTCAGCATGATGGTCTTCAGGATTGGCATCCCGGACCTGCACCAGACAAAATGCCTGCGCTTCAACCCCGATGCCACCATCTGGACAGCCAAGCAGCAGGTGCTCTGCGCCCTGAGCGAGAGCCTGCAGGACGTGCTCAACTACGGCCTCTTCCAGCCGGCCACCTCCGGCCGCGACGCCAACTTCCTGGAGGAGGAGCGGCTGCTACGGGAGTACCCCCAGTCCTTCGAGAAGGGGGTCCCCTACCTGGAGTTCCGATACAAGACCCGAGTTTACAAACAGACCAACCTGGACGAGAAGCAGCTGGCCAAGCTGCACACGAAGACAGGGTTGAAGAAGTTCCTGGAGTATGTGCAGCTCGGGACGTCTGACAAGGTGGCGCGACTGCTGGACAAGGGGCTGGACCCCAACTACCACGACTCGGATTCGGGAGAGACCCCCTTGACTCTAGCGGCCCAGACTGAAGGCTCTGTAGAGGTGATTCGAACTCTGTGCCTGGGTGGAGCCCACATTGACTTCCGGGCCCGGGATGGCATGACAGCGCTGCACAAGGCCGCGTGTGCCCGACACTGCCTGGCGCTCACGGCACTCCTGGACCTCGGGGGATCCCCCAACTACAAGGACCGCCGGGGCCTAACCCCTCTGTTCCACACCGCCATGGTGGGGGGGGACCCCCGCTGCTGCGAGCTGCTTCTGTACAACAGAGCCCAGCTGGGCATAGCAGACGAGAATGGCTGGCAGGAGATTCACCAGGCCTGTCAGCGGGGCCACTCTCAGCACCTGGAGCACCTGCTCTTCTACGGGGCTGAGCCTGGAGCCCAGAATGCCTCGGGGAACACGGCCCTGCACATCTGTGCTCTCTACAACAAGGAGACCTGCGCCAGGATCCTCCTGTATCGAGGGGCCAACAAGGATGTGAAGAATAATAGCGGACAGACACCCTTTCAGGTGGCAGTGATTGCTGGGAACTTCGAGCTAGGGGAGCTCATCCGGAACCATCGGGAGCAGGATGTGGTGCCCTTTCAGGAGTCCCCAAAGTACGCGGCTCGGCGACGGGGACCCCCAGGGGCAGGGTTGACAGTGCCCCCTGCGCTGCTCAGGGCCAACAGCGACACCAGCATGGCGCTGCCCGACTGGATGGTGTTCTCTGCCCCGGGGCCCTCACCCTCCGGGGCCCCGGGCCCTACCTCAGGGCCCCAGGTCCAGTCACAGCCCTCAGCCCCCAGCACCAAGCTCAGCAGCGGGACCCTCCGAAGTGCCAGCAGCCCTCGGGGCGCCAGGGCCCGGTCCCCATCCCGAGGGAGGCACCCCGAGGATGCCAAGAGGCAACCCCGAGGACGGCCCAGCTCCAGCGGGACGCCCCGGGAAGGGCCTGCCGGGGGAACGGGGGGCTCCGGGGGTCCTGGGGGCTCCCTGGGCAGCCGAGGCCGAAGGAGGAAACTCTACTCAGCAGTCCCTGGACGCTCCTTCATGGCTGTGAAGTCGTACCAGGCCCAAGGCGAGGGCGAGATCTCCCTGAGCAAGGGCGAGAAGATCAAAGTGCTCAGCATCGGGGAAGGAGGCTTCTGGGAAGGGCAGGTCAAAGGTCGAGTAGGCTGGTTCCCCTCTGACTGCCTGGAAGAGGTGGCAAACCGCTCCCAGGAGGGAAAGCAAGAGAGCCGCAGCGACAAGGCAAAGAGACTCTTCCGACATTATACCGTGGGCTCCTACGACAGCTTCGATGCCCCAAGCTTGATGGATGGGATTGGCCCAGGGAGCGATTACATCATTAAGGAGAAAACAGTCTTGCTGCAGAAGAGGGACAGCGAGGGGTTTGGGTTCGTGCTCCGGGGGGCCAAGGCGCAGACCCCCATCGAGGAGTTCACCCCTACCCCGGCCTTCCCGGCGCTGCAGTACCTCGAGTCCGTGGACGAGGGGGGCGTGGCATGGCGGGCTGGACTGCGAATGGGAGACTTCCTCATCGAGGTGAACGGGCAGAATGTGGTGAAGGTCGGCCACCGCCAGGTGGTGAACATGATCCGCCAAGGGGGCAACACGCTCATGGTGAAGGTGGTGATGGTCACCAGGCACCCGGACATGGACGAGGCCGTCCACAAGAAAGCACCCCAGCAGGCGAAGCGGCTCCCGCCCCCAGCGATCTCCCTGCGCTCCAAGTCAATGACCTCCGAGCTGGAGGAAATGGTCTCCCCCTGGAGGAAGAAGAGCGAGTATGAGCAACCTCCTACGCCGGTGCCCAGCATGGAGAAAAAGCGGACAGTGTATCAGATGGCTCTCAACAAACTGGACGAGATACTGGCTGCAGCCCAGCAGACTATCAGCGCGAGCGAGAGCCCTGCGCCGGGAGGCCTGGCGTCCCTGGGCAAGCACCGGCCCAAAGGCTTTTTCGCCACCGAGTCAAGCTTCGATCCCCATCACCGCTCCCAGCCAAGTTACGAGCGCCCTTCCTTCCTGCCTCCTGGACCTGGGCTCATGCTCCGACAAAAATCTATCGGGGCTGCAGAGGATGACAGACCGTACCTAGCACCCCCAGCCATGAAGTTCAGCCGCAGCCTGTCTGTGCCGGGCTCGGAGGACATCCCCCCGCCGCCCACCACGTCCCCACCAGAGCCCCCGTACAGCACACCCCCGGCCCCCTCCTCCTCGGGCCGCCTCACCCCGTCCCCGCGGGGAGGCCCCTTCAACCCCGGCTCCGGGGGACCCCTCCCCGCCTCCTCCCCAGCGTCCTTTGACGGCCCCTCCCCTCCCGACACGCGCGTGGGGGGCCGGGACAAGAGCCTGTACCACGGTGGCCCCTTGCCCCCTGCGCACCACCACCACCACCACCACCACCACCACCACGCGCACCCGCCGCACCCGCCCGAGATGGAGACGGGCGCCCCCGACGACGCCCCGCCACGCCTGGCTCTGGGGCCCCAGCCCAGCCTGCGGGGCTGGAGGGGCGGCGGGCCCAGCCCGAGCCCGGGGGCGCCCTCACCGTCGCACCACGCGGGGGCTGGCGCCGGGGGCGCCCCGCAAGCCCCGGCCCTGCGCTACTTCCAGCTGCCGCCGCGCGCCGCTAGCGCCGCCATGTACGTGCCCGCGCGCTCCGGCCGCGGCCGCAAGGGGCCGCTGGTCAAGCAGACCAAGGTGGAGGGCGAGCCGCACAAGGGCGCCCTGCCTCCCGCCGCGCCCGGGTCCCCCGCGTCGCCGCAGCCGCTGCCCCCCGCGCCCGCGCCGGCCGAGAAGAACTCCATCCCCATCCCCACCATCATCATCAAGGCTCCGTCCACCAGCAGCAGCGGCCGCAGCAGCCAGGGCAGCAGCACCGAGGCCGAGCCGCCCACCCAGCCCGAGACCCCCGCAGGCGGCGGGGGCTCGTCATCCAGCCCAGCGCCGCCCCTGTCGCCCGTGCCGCCCTCGCCGTCGCCCGTGCCCACGCCCGCGTCGCCCAGCGGCCCGGCCACCCTGGACTTCACCAGCCAGTTCGGGGCGGCGCTGGTGGGCGCGGCGCGCAGGGATGGCGGCTGGCAGAACGAGGCCCGCCGGCGCTCCACGCTCTTCCTTTCCACGGACGCGGGAGACGAGGAAGGCGGCGAAGGCGGGCTGGGCGCCGGGGCCACCCCGGGCCCGCGGCTGCGCCACTCCAAGTCCATCGACGAGGGCATGTTCTCCGCCGAGCCCTACCTCCGCCTGGAGTCTGCGGGCGGCTCGGGGAGCTCCGGCTACGCGGGCTACTCGGCGGGCGCACGCGCCTACGCGGGCAGCGGGGCCAGCAGCGCCTTCTCCAGCTTCCTGCCCCCGCGGCCCCTGCTGCACCCGCTCACCGGCAAGGCCCTGGACCCGGCCTCCCCGCTCGGGCTGGCGCTGGCCGCCCGTGAGCGCGCGCTGAAGGAGTCCTCAGAGGGCGGCGGCGCCCCCCAGCCCCCGCCCCGCCCCCCCTCGCCCCGCTACGACGCGCCGCCGCCCACCCCGCATCACCACTCGCCCCACGCGCACCACGAGCCCGTGCTGCGCCTCTGGGGGGCGCCGCCGCCCGACCCCCCGCGCCGGGAGCTGGGCTACCGAGCGGGGCTGGGCGGGCCAGAGAAGCCGCTCCCCGCCAGCCCACCCGCCGCGCGGCGCTCGCTGCTGCACCGCCTGCCGCCCACGGCGCCCGGCGTGGGGCCCCTGCTGCTGCAGCTGGGGCCCGAGCCTCCCGCCCCACACCCCGGGGTCAGCAAGGCCTGGAGGTCTGGAGGCGCGGAGGAGCCTGAGCGGCTACCCCTCCACGTGCGCTTCCTCGAGAACTGTCAGCCGCGCGCCAGGCCGGCGGCGGTCTCCAGGGGGCCCTCGGCGGAGGATGGGCCCGGGGTCCCGCCGCTCAGCCCGCGCCGCTCCGTGCCCGCCTGTCCCACGTCCCCGCGGGGCGGCGAGGAGAATGGGCTCCCTCTGCTCGTGCTGCCGCCGCCGGCCCCGTCGGTGGACGCGGACGACGGTGACTTCCTCTTTGCGGAGCCGCTTCCCCCACCCCTCGAGTTTTCCAACAGCTTCGAGAAGCCGGAGTCGCCCCTCACGCCGGGCCCCCCCCAGCCGCTCCCGGACCCCCCTGCTCCAGTCACCCCCCTGCCCCCCGTGCCCCCCCCGGCGGCAGCCGCCCCTGGCCCGCCCGCCCTGGACTCCACTGCATCCAGCCTGACGTCCTATGACAGCGAGGTGGCCACGCTCACTCAGGGGCCCCCCGCGGCTCCCGGGGACCACCCCACCCCAGGCCCGCCGGCCCCAGCGGCCCCAGCGCCCCCCGCCCCGCAGCCGGGCCCAGATCCGCCACCGGGCACGGACTCCGGGATCGAGGAGGTGGACAGTCGCAGCAGCAGTGACCACCCCTTGGAGACCATCAGCAGCGCGTCCACGCTGAGCAGCCTGTCTGCCGAGGGCGGGGGCGGGGTGGCCAGCGGGCCTGAGCTGCTGGACACCTACGTGGCCTACTTGGACGGCCAGGCCTTCGGGGGCAGCGGGCCGCCGTATCCCCCGCAGCTCACGACTCCCTCGAAGCTCCGAGGCCGGGCGCTGGGGGCAGCCGGAGGCCTTCGACCCGGCCCCAGTGGCGGGCTCCGAGACCCTGTCACCCCCACCAGCCCCACGGTCTCTGTGACTGGGGCCGGAAACGACGGGCTGCTGGCCCTGAGCGCCTGTTCGGGGCCCTCTTCGGCAGGCGTGGCCGGGGGCCCGGTATCGGTGGAGCCGGAAGTCCCCCCGGTGCCCTTGCCTGCCGCCGCCTCCCTGCCTCGGAAGCTACTGCCCTGGGAGGAGGGCCCGGGCCCGCCACCACCACCCCTGTCTGGGCCCCTGTCCCAGCCTCAGGCCTCCGCCTTGGCCACCGTCAAAGCCAGCATCATCAGCGAACTCAGCTCCAAGCTCCAGCAGTTCGGGGGCTCCTCAGCAGCTGGAGGGGCTCTGCCTTGGGCCCGGGGAGGCAGCGGGGGCACTGGGGACAGCCACCACGGTGGAGCCGGCTACGTCCCCGAGAGGACCTCCTCCCTGCAGCGGCAGAGGCTCTCCGACGACTCCCAGTCCTCGCTCCTCCCCAAGCCCGTGGGCAGCCTGTTTCAGAACTGGCCCAAGCCACCTCTGCCGCCACTCCCCACTGGATCCGGGGTGTCGCCTTCAGCCACTGCACCCCCGGGGGCCATCTCACCTTCTGCTTCCTCCTCCTCCACCTCCTCCCGCCACCTCCAGGGCGTAGAGTTCGAGATGCGGCCCCCCCTGCTCCGCCGGGCCCCCAGCCCCTCGCTGCTGCCCGCCTCGGAGCACAAGGTCAGCCCAGCACCCAGGCCCTCGTCCCTGCCCATCCTGCCTTCAGGCCCTCTCTACCCGGGCCTCTTCGACATCCGCGGCTCCCCCACCGGTGGGGCGGGGGGCTCCGCGGACCCCTTCGCCCCTGTCTTCGTGCCGCCGCACGCGGGGATGTCCGGGGGCCTGGGAGGAGCCTTGTCGGGGGCCTCTCGCTCCCTGTCGCCCACCCGCCTGCTGTCGCTGCCCCCGGACAAACCGTTTGGCGCCAAACCTCTGGGCTTCTGGACCAAGTTCGATGTGGCCGACTGGCTAGAGTGGCTGGGCCTGGCCGAGCACCGGGCCCGCTTCCTGGACCACGAGATCGACGGCTCCCACCTGCCCGCCTTGACCAAGGAGGACTATGTGGACCTGGGGGTCACCAGGGTGGGCCACCGCATGAACATCGACCGGGCTCTCAAGTTTTTCCTGGAGAGGTGA

Related Sequences

XP_004866846.1 Protein

Shank1 PREDICTED: SH3 and multiple ankyrin repeat domains protein 1 isoform X1 [Heterocephalus glaber]

Length: 2144 aa     
>XP_004866846.1
MTHSPATSEDEERHSASECPEGGSASDSSPDGPGRGLRGTRGQGSGAPGNLASARGLQGRSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHIDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLLYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKETCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARRRGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGPSPSGAPGPTSGPQVQSQPSAPSTKLSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGSLGSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRVGWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIKEKTVLLQKRDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPAISLRSKSMTSELEEMVSPWRKKSEYEQPPTPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPAPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSFLPPGPGLMLRQKSIGAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPGSGGPLPASSPASFDGPSPPDTRVGGRDKSLYHGGPLPPAHHHHHHHHHHHAHPPHPPEMETGAPDDAPPRLALGPQPSLRGWRGGGPSPSPGAPSPSHHAGAGAGGAPQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPHKGALPPAAPGSPASPQPLPPAPAPAEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPETPAGGGGSSSSPAPPLSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARRDGGWQNEARRRSTLFLSTDAGDEEGGEGGLGAGATPGPRLRHSKSIDEGMFSAEPYLRLESAGGSGSSGYAGYSAGARAYAGSGASSAFSSFLPPRPLLHPLTGKALDPASPLGLALAARERALKESSEGGGAPQPPPRPPSPRYDAPPPTPHHHSPHAHHEPVLRLWGAPPPDPPRRELGYRAGLGGPEKPLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPAPHPGVSKAWRSGGAEEPERLPLHVRFLENCQPRARPAAVSRGPSAEDGPGVPPLSPRRSVPACPTSPRGGEENGLPLLVLPPPAPSVDADDGDFLFAEPLPPPLEFSNSFEKPESPLTPGPPQPLPDPPAPVTPLPPVPPPAAAAPGPPALDSTASSLTSYDSEVATLTQGPPAAPGDHPTPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGGVASGPELLDTYVAYLDGQAFGGSGPPYPPQLTTPSKLRGRALGAAGGLRPGPSGGLRDPVTPTSPTVSVTGAGNDGLLALSACSGPSSAGVAGGPVSVEPEVPPVPLPAAASLPRKLLPWEEGPGPPPPPLSGPLSQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGTGDSHHGGAGYVPERTSSLQRQRLSDDSQSSLLPKPVGSLFQNWPKPPLPPLPTGSGVSPSATAPPGAISPSASSSSTSSRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHAGMSGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER