Details from NCBI annotation

Gene Symbol Prpf31
Gene Name pre-mRNA processing factor 31, transcript variant X2
Entrez Gene ID 101697344

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRPF31 ENSCPOG00000011507 (Guinea pig)

Gene Details

pre-mRNA processing factor 31

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010350, Guinea pig)

Protein Percentage 98.8%
CDS Percentage 92.45%
Ka/Ks Ratio 0.00749 (Ka = 0.0049, Ks = 0.6543)

PRPF31 ENSG00000105618 (Human)

Gene Details

pre-mRNA processing factor 31

External Links

Gene Match (Ensembl Protein ID: ENSP00000324122, Human)

Protein Percentage 98.2%
CDS Percentage 93.32%
Ka/Ks Ratio 0.01461 (Ka = 0.0074, Ks = 0.505)

Prpf31 ENSMUSG00000008373 (Mouse)

Gene Details

PRP31 pre-mRNA processing factor 31 homolog (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000008517, Mouse)

Protein Percentage 97.8%
CDS Percentage 88.78%
Ka/Ks Ratio 0.00944 (Ka = 0.0096, Ks = 1.0198)

Prpf31 ENSRNOG00000013504 (Rat)

Gene Details

pre-mRNA processing factor 31 (Prpf31), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018683, Rat)

Protein Percentage 98.2%
CDS Percentage 89.25%
Ka/Ks Ratio 0.00955 (Ka = 0.0079, Ks = 0.832)

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location: 2454660..2445144   Strand: -
>XM_004866726.1
ATGTCTCTGGCAGATGAGCTTTTGGCTGACCTTGAGGAGGCAGCTGAAGAGGAGGAAGGAGGAAGCTTTGGAGAGGAGGAAGAGGAGCCAGCGATTGAGGATGTACAGGAGGAGACACAGCTGGATCTCTCTGGGGATTCAGTCAAGAGTATCGCCAAGCTGTGGGATAGCAAGATGTTTGCTGAGATCATGATGAAGATTGAGGAGTACATCAGCAAGCAAGCCAAAGCTTCAGAAGTGATGGGGCCGGTGGAGGCAGCCCCCGAGTACCGTGTCATTGTGGACGCCAACAACCTGACTGTGGAGATCGAAAATGAGCTGAACATCATCCATAAGTTCATCCGGGACAAGTACTCGAAGAGGTTCCCCGAGCTGGAGTCCTTGGTCCCCAACGCACTGGACTACATCCGCACGGTCAAGGAGCTGGGCAACAGCCTGGACAAGTGCAAGAACAACGAGAACCTGCAGCAGATCCTCACCAACGCCACCATCATGGTGGTCAGCGTCACGGCCTCCACCACCCAGGGGCAGCAGCTGTCGGAGGAGGAGCTGGAGCGGCTGGAGGAGGCCTGCGACATGGCCCTGGAGCTGAACGCGTCCAAGCACCGCATCTACGAGTACGTGGAGTCCCGCATGTCCTTCATCGCCCCCAGCCTGTCCATCATCGTGGGCGCCTCCACGGCAGCCAAGATCATGGGTGTGGCCGGCGGCCTGACCAACCTCTCCAAGATGCCCGCCTGCAACATCATGCTGCTCGGGGCCCAGCGCAAGACACTGTCCGGCTTCTCATCTACCTCCGTGCTGCCCCACACTGGCTACATCTACCACAGCGACATCGTGCAGTCCCTGCCCCCGGATCTGCGGCGGAAGGCGGCCCGGCTGGTGGCCGCCAAATGCACACTGGCCGCCCGCGTGGACAGTTTCCACGAGAGCTCGGAGGGGAAGGTGGGCTATGAACTGAAGGACGAGATCGAGCGCAAATTTGACAAGTGGCAGGAGCCGCCGCCTGTGAAGCAGGTGAAGCCCCTGCCCGCACCCCTGGATGGGCAGCGGAAGAAGCGAGGGGGCCGCAGGTACCGCAAGATGAAGGAGCGGCTGGGACTGACAGAGATCCGGAAGCAGGCCAACCGCATGAGCTTCGGAGAGATCGAGGAGGACGCCTACCAGGAGGACCTGGGCTTCAGCCTGGGCCACCTCGGCAAGTCGGGCAGTGGGCGCGTGCGCCAGACACAGGTGAACGACGCCACCAAGGCCAGGATCTCCAAGACGCTGCAGCGGACCCTGCAGAAGCAGAGCGTGGTGTATGGCGGGAAGTCCACCATCCGCGACCGCTCCTCGGGCACCGCCTCCAGCGTGGCTTTCACCCCCCTCCAGGGTCTGGAGATCGTGAACCCACAGGCAGCGGAGAAGAAGGTGGCCGAGGCCAACCAGAAGTATTTCTCCAGCATGGCCGAGTTCCTCAAGGTCAAGAGCGAGAAGAGCGGCATCACGTCCACCTGA

Related Sequences

XP_004866783.1 Protein

Prpf31 PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31 isoform X2 [Heterocephalus glaber]

Length: 499 aa      View alignments
>XP_004866783.1
MSLADELLADLEEAAEEEEGGSFGEEEEEPAIEDVQEETQLDLSGDSVKSIAKLWDSKMFAEIMMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALDYIRTVKELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDMALELNASKHRIYEYVESRMSFIAPSLSIIVGASTAAKIMGVAGGLTNLSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCTLAARVDSFHESSEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYRKMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNDATKARISKTLQRTLQKQSVVYGGKSTIRDRSSGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYFSSMAEFLKVKSEKSGITST