Sequence details NCBI ID: XM_004866724.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tfpt
Gene Name TCF3 (E2A) fusion partner (in childhood Leukemia)
Entrez Gene ID 101696969

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFPT ENSCPOG00000011503 (Guinea pig)

Gene Details

TCF3 (E2A) fusion partner (in childhood Leukemia)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010344, Guinea pig)

Protein Percentage 92.49%
CDS Percentage 90.12%
Ka/Ks Ratio 0.08369 (Ka = 0.036, Ks = 0.4296)

TFPT ENSG00000105619 (Human)

Gene Details

TCF3 (E2A) fusion partner (in childhood Leukemia)

External Links

Gene Match (Ensembl Protein ID: ENSP00000375639, Human)

Protein Percentage 92.49%
CDS Percentage 87.62%
Ka/Ks Ratio 0.07443 (Ka = 0.0408, Ks = 0.5484)

Tfpt ENSMUSG00000006335 (Mouse)

Gene Details

TCF3 (E2A) fusion partner

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000123636, Mouse)

Protein Percentage 91.97%
CDS Percentage 84.61%
Ka/Ks Ratio 0.05191 (Ka = 0.0413, Ks = 0.7959)

Tfpt ENSRNOG00000013980 (Rat)

Gene Details

TCF3 (E2A) fusion partner (Tfpt), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018913, Rat)

Protein Percentage 91.97%
CDS Percentage 83.13%
Ka/Ks Ratio 0.04324 (Ka = 0.0415, Ks = 0.96)

Genome Location

Sequence Coding sequence

Length: 762 bp    Location: 2455421..2459367   Strand: +
Raw sequence   
>XM_004866724.1
ATGGAGCTGGAGCAGCGAGAGGGGACCATGGCAGCCGTGGGGTTTGAGGAGTTCTCGGCCCCGCCGGGCTCAGAGTTGGCGCTACCCCCCCTGTTTGGCGGCCACATCCTGGAGAGCGAGCTAGAGACCGAGGTGGAGTTTGTGTCTGGTGGCTTGGGGGGCTCGGGGCTCCGGGAGCGCGACGAAGAGGAAGAGGCAGCCCGGGGGCGGCGGAGGCGCCAGCGAGAGCTGAACCGCAGGAAGTACCAGGCGCTGGTCCGGCGCTGCCGGGAGATCGAGCAGGTGAACGAGCGCGTCCTCAACAGGCTGCACCAGGTCCAGCGGATCACTCGGAGGTTGCAGCAGGAGCGCAGGTTCCTCATGAGGGTGCTGGACTCCTACGGAGATGACTACCGGGCCAGCCAGTTCACCATTGTGCTGGAGGACGAGGGCAGCCAGGGCACAGACACCCCCACCCCAGGCAATGCTGAGAACGAGCCTCCTGAGAAGGAGGAGCTGTCCCCACCCAGAAGGACTCCGGCAGCCCTGGAAGCCAGCAGCCCAGCCCCTGGTGAGGGGCTCAGTGGGCGGAAGAGGCGGCGAGCACCACGGGATGGGGGCCGGGTGGGTGCTTTGCTGACCCCAGAGCCGGCCCCTGTGCAGGTTAAGGTCGAGGAAGACTTTGGCTTTGAAGCAGATGAGACCCTGGATTCAAGTTGGGTGTCTCGGGGTCCTGACAAACTGCTGCCCTACCCTACTCTGGCCACCCCACCCTTCGACTGA

Related Sequences

XP_004866781.1 Protein

Tfpt PREDICTED: TCF3 fusion partner [Heterocephalus glaber]

Length: 253 aa      View alignments
>XP_004866781.1
MELEQREGTMAAVGFEEFSAPPGSELALPPLFGGHILESELETEVEFVSGGLGGSGLRERDEEEEAARGRRRRQRELNRRKYQALVRRCREIEQVNERVLNRLHQVQRITRRLQQERRFLMRVLDSYGDDYRASQFTIVLEDEGSQGTDTPTPGNAENEPPEKEELSPPRRTPAALEASSPAPGEGLSGRKRRRAPRDGGRVGALLTPEPAPVQVKVEEDFGFEADETLDSSWVSRGPDKLLPYPTLATPPFD