Sequence details NCBI ID: XM_004866713.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tsen34
Gene Name tRNA splicing endonuclease 34 homolog (S. cerevisiae), transcript variant X2
Entrez Gene ID 101723932

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSEN34 ENSCPOG00000012672 (Guinea pig)

Gene Details

TSEN34 tRNA splicing endonuclease subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011399, Guinea pig)

Protein Percentage 89.07%
CDS Percentage 88.3%
Ka/Ks Ratio 0.14467 (Ka = 0.0632, Ks = 0.4371)

TSEN34 ENSG00000170892 (Human)

Gene Details

TSEN34 tRNA splicing endonuclease subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000379667, Human)

Protein Percentage 91.06%
CDS Percentage 85.54%
Ka/Ks Ratio 0.05588 (Ka = 0.0477, Ks = 0.8546)

Tsen34 ENSMUSG00000035585 (Mouse)

Gene Details

tRNA splicing endonuclease 34 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000104270, Mouse)

Protein Percentage 88.74%
CDS Percentage 84.88%
Ka/Ks Ratio 0.07624 (Ka = 0.059, Ks = 0.7742)

Genome Location

Sequence Coding sequence

Length: 975 bp    Location: 2406900..2401411   Strand: -
Raw sequence   
>XM_004866713.1
ATGAGCTCACGCAGGTCTCGGGTTGCAGAGCCAGAGCTGCCGCGAAGAGGCGCGCGGCTGGGGAGGATGCTGGTGGTGGAGGTGGCGAACGGCCGCTCGCTGGTGTGGGGGGCCGAGGCGGTTCAGGCGCTGCGGGAGCGCCTGGGCGTGGGGGGCCGCACGGTGGGCGCCCTGCCCCGCGGGCCCCGGCAGAACTCGCGCCTGGGCCTCCCGTTGCTGCTTTTGCCGGAGGAGGCGCGGCTCCTGGCCGAGATCGGCGCCGTGACCCTGGTCAGCTCCCCTCGCCGGGATCCCAGCCAGCACAGCCTGGCTCTGGCATCGTTCAGACGCCAGCAAGAGCAGAGCTTCCAGGAGCAAAGCGCGTTGGCGGCCGAGGCCCGTGAGAACCGGCGTCAGGAGCTCCTGGAGAAGATTGCAGAGGGCCAGGCTGCCAAGAAGCAGAAGCTGGAGCAGGATTCCGAGGCCGGCGGGAGCCGAGCCGCGGAAGAGAGCGAGATCGGAGGTGGCCAGGCCTCCGGGGAGCAGGAGGAAGCAGTGCCTTCTTCTCAAGCAGCTTCAGATGGGGCGGCGCCCTTGCCCAGGTCTGCCCTGCTGGTCCAGCTGGCCACCGCCAGGCCTCGGCCTGTTAAGGCCAGGCCCCTGGACTGGCGCGTGCAGTCCAAAGACTGGCCCCACGCCGGCCGGCCCGCCCACGAGCTGCGCTACAGCATCTACAGAGATCTGTGGGAGCGAGGCTTTTTCCTCAGCGCCGCCGGCAAGTTCGGCGGCGACTTCCTGGTGTATCCTGGTGACCCGCTCCGTTTCCATGCCCACTACATTGCCCAGTGCTGGGCTCCGGAGGACCCCATTCCACTGCAGGACCTGGTCTCTGCCGGCCGCCTGGGAACAAGTGTGAGGAAGACGCTGCTGCTGTGCTCCCCACAGCCTGATGGTAAGGTGGCCTACACCTCCCTGCAGTGGGCCAGCCTGCAGTGA

Related Sequences

XP_004866770.1 Protein

Tsen34 PREDICTED: tRNA-splicing endonuclease subunit Sen34 isoform X2 [Heterocephalus glaber]

Length: 324 aa      
>XP_004866770.1
MSSRRSRVAEPELPRRGARLGRMLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLLPEEARLLAEIGAVTLVSSPRRDPSQHSLALASFRRQQEQSFQEQSALAAEARENRRQELLEKIAEGQAAKKQKLEQDSEAGGSRAAEESEIGGGQASGEQEEAVPSSQAASDGAAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGKVAYTSLQWASLQ