Sequence details NCBI ID: XM_004866681.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ppp1r12c
Gene Name protein phosphatase 1, regulatory subunit 12C, transcript variant X1
Entrez Gene ID 101714373

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPP1R12C ENSCPOG00000027133 (Guinea pig)

Gene Details

protein phosphatase 1, regulatory subunit 12C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020011, Guinea pig)

Protein Percentage 81.11%
CDS Percentage 82.18%
Ka/Ks Ratio 0.1938 (Ka = 0.1229, Ks = 0.6341)

PPP1R12C ENSG00000125503 (Human)

Gene Details

protein phosphatase 1, regulatory subunit 12C

External Links

Gene Match (Ensembl Protein ID: ENSP00000263433, Human)

Protein Percentage 85.77%
CDS Percentage 85.21%
Ka/Ks Ratio 0.11889 (Ka = 0.0753, Ks = 0.6335)

Ppp1r12c ENSMUSG00000019254 (Mouse)

Gene Details

protein phosphatase 1, regulatory (inhibitor) subunit 12C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000013886, Mouse)

Protein Percentage 82.93%
CDS Percentage 81.56%
Ka/Ks Ratio 0.1127 (Ka = 0.0953, Ks = 0.8456)

Ppp1r12c ENSRNOG00000027959 (Rat)

Gene Details

protein phosphatase 1, regulatory subunit 12C (Ppp1r12c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030133, Rat)

Protein Percentage 83.06%
CDS Percentage 81.09%
Ka/Ks Ratio 0.11032 (Ka = 0.0945, Ks = 0.857)

Genome Location

Sequence Coding sequence

Length: 2385 bp    Location: 2105037..2122327   Strand: +
Raw sequence   
>XM_004866681.1
ATGTCTGGGGAGGATGGCCCGGCAGGCGGTCCGGGGGCCTCGGCGGCAGCCCGCGAACGGCGGCAGGAGCAACTGCGACAGTGGGGGGCGCGGGCGGGCGCCGAGCCGGGCGCCGAGCCGGGCGCCGAGCCGGGCCTCAGGGAACGGCGCGCCCGCACGGTCCGCTTCGAGCGCGCCGCCGAGTTCCTGGCGGCCTGCGCGGGCGGAGACCTGGACGAGGCGCTGCTGATGTTGCGTGCGGCAGAGCCGGGCTCCTGCGCCGAGCCAGACCCAGACCCCGCCGCCCCGCCGCCCGCCCTCGCCGTGCTCGACTCCACCAACGCCGACGGCATCAGCGCCCTGCACCAGGCCTGCATTGACGAGAACCTGGAGGTCGTCCGCTTCTTGGTGGAGCAGGGCGCCACCGTGAACCAGGCGGACAACGAGGGCTGGACGCCCCTGCACGTGGCCGCCTCCTGTGGCTACCTGGACATCGCCAGGTACCTCCTGAGCCATGGGGCCAACATCGCTGCTGTCAACAGTGACGGGGACCTGGCCCTGGACCTGGCCGAGTCGGATGCCATAGAGGGGCTGCTGCAGGCGGAGATCGCTCGCAGAGGTGTGGATGTGCAGGCAGCCAAGCGGGCGGAGGAGGAGCTGCTGCTTCATGACACGCGGTGCTGGCTGAATGGGGGCGCCATGCCCGAGGCCCGGCACCCACGCACGGGGGCCTCTGCCCTGCACGTGGCCGCCGCCAAGGGCTACATCGAGGTGATGAGGCTCCTGCTGCAGGCCGGCTATGACCCGGAGCTCCGAGATGGGGATGGCTGGACCCCCCTGCACGCGGCAGCCCACTGGGGTGTGGAGGACGCGTGTCGCCTGCTGGCCGAGCATGGCGGGGGCATGGACTCGCTGACCCACGCGGGGCAGCGGCCCTGTGACCTGGCAGATGAAGAGGTGCTGAGCCTGTTGGAGGAACTGGCTCAGAAGCAGGAGGACCTTCGACACCAGAAGGAAGCTGGCCGGAGCAGAGGCCAGGAGCCCCAGGTTCCATCCAGCAGCAAGCACAGGCGGAGCTCTGTGTGCCGCCTGAGCAGCCGCGAGAAGATCTCCCTGCAGGACCTGTCCAAGGAGCGCAGGCCAGGCGGGGCAGGGGGGCCGCCCATCCGGGACGAGGAGGAAGGGGAAGAGGGCCATCCCGAGCCGCCCCCTGCAGAACCCAGAGCCCTCAATGGCGTGTCCTCCCCGCCCCTCGCCAGTCCCCCGAGCCCTGTGCTGCCTGCCGCCGCCACTGCTGCACCCTGCTCTCAGCGTTTTGGCCTCCAGAAGACTGGGAGCTCTGGGGCTTTGGGGCCTACAGAGAGGCGGGGGGCCGAGGCAGCCACTGGGGCTGGGCTGCAGCGCTCGGCCTCCTCGTCCTGGCTGGAAGGGACCTTGGCGCAGGCCAGGGAGCCCTGTCTTGCCGGGATTCCCCCCACTCTCTCCCGGAAGACCCCGGAGCCCTGTCCCCTGTCTGGGGTTGCCAGGCCCCCACCCACCTTGTATAACTGCACTCCTCCCTCCAGCAGGGAGCTGGGGTCCCCAGCGAAGCCAAATGTCCCCCCAGCCTCCACCCCGGCCCCAGCGGACTCCCGTGACCGGCGGAGGTCCTACCAGATGCCTGCACGGGATGAGGAGTCCGAATCCCAGCGGAAAGCGCGCTCCCGCCTCATGCGCCAGTCTCGGAGGTCCACACAGGGCGTGACTCTGACAGACCTGAAGGAAGCAGAGAAGGTGGCAGGAAAGTCCACTGAGGCAGCGAAGCTGTCTCTGCGGGGCCTGGACCCTTCCCCGAGGCCCAGAGTCCCTGGAGTGGAGAACTCTGAGGGCCCTGCCCGGAGAGCAGAGGCGCCTGATGGGCAGGGCCAGGGACCACAGACTGCCAGGGAGCCCCGCAAGGCTGGCAGGGAGCGGTGGGGGCCTGCGGAGGGGGAGGAGGCGGAGCCCGAGGAGCACAGCTCCGAGTGCAGCAACCGTGTAGATGCCCTCGTGGCCCGGAGGCCTCGGCCGAAGCAGAACCTCACCCCAGAGCCCGAGCTGAAACCAGAGGAGCCAGACGGGGGCTTCAGGAAGCTGTACTCGGAGCTGCGCAGGGAGAACGAGCGGCTTCGAGAGGCCCTGACCGAGACCACACTGCGGCTGGCACAGCTCAAGGTAGAGCTGGAGCGGGCCACACAGCGGCAGGAACGCTTCGCAGAGAGGCCCGCCCTCCTGGAGCTGGAGAGATTTGAGCGCAGGGCCCTGGAGCACAAGGCTGCCGAGCTGGAGGAGGAGCTGAAGGCCCTGTCTGACCTCCGCGCTGATAACCAGCGGCTCAAGGATGAGAATGCAGCACTGATCCGAGTCATCAGCAAGCTGTCCAAGTGA

Related Sequences

XP_004866738.1 Protein

Ppp1r12c PREDICTED: protein phosphatase 1 regulatory subunit 12C isoform X1 [Heterocephalus glaber]

Length: 794 aa      View alignments
>XP_004866738.1
MSGEDGPAGGPGASAAARERRQEQLRQWGARAGAEPGAEPGAEPGLRERRARTVRFERAAEFLAACAGGDLDEALLMLRAAEPGSCAEPDPDPAAPPPALAVLDSTNADGISALHQACIDENLEVVRFLVEQGATVNQADNEGWTPLHVAASCGYLDIARYLLSHGANIAAVNSDGDLALDLAESDAIEGLLQAEIARRGVDVQAAKRAEEELLLHDTRCWLNGGAMPEARHPRTGASALHVAAAKGYIEVMRLLLQAGYDPELRDGDGWTPLHAAAHWGVEDACRLLAEHGGGMDSLTHAGQRPCDLADEEVLSLLEELAQKQEDLRHQKEAGRSRGQEPQVPSSSKHRRSSVCRLSSREKISLQDLSKERRPGGAGGPPIRDEEEGEEGHPEPPPAEPRALNGVSSPPLASPPSPVLPAAATAAPCSQRFGLQKTGSSGALGPTERRGAEAATGAGLQRSASSSWLEGTLAQAREPCLAGIPPTLSRKTPEPCPLSGVARPPPTLYNCTPPSSRELGSPAKPNVPPASTPAPADSRDRRRSYQMPARDEESESQRKARSRLMRQSRRSTQGVTLTDLKEAEKVAGKSTEAAKLSLRGLDPSPRPRVPGVENSEGPARRAEAPDGQGQGPQTAREPRKAGRERWGPAEGEEAEPEEHSSECSNRVDALVARRPRPKQNLTPEPELKPEEPDGGFRKLYSELRRENERLREALTETTLRLAQLKVELERATQRQERFAERPALLELERFERRALEHKAAELEEELKALSDLRADNQRLKDENAALIRVISKLSK