Details from NCBI annotation

Gene Symbol Syt5
Gene Name synaptotagmin V, transcript variant X1
Entrez Gene ID 101713220

Database interlinks

Part of NW_004624832.1 (Scaffold)

For more information consult the page for NW_004624832.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYT5 ENSCPOG00000009084 (Guinea pig)

Gene Details

synaptotagmin V

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008157, Guinea pig)

Protein Percentage 93.26%
CDS Percentage 91.62%
Ka/Ks Ratio 0.09013 (Ka = 0.0316, Ks = 0.3501)

SYT5 ENSG00000129990 (Human)

Gene Details

synaptotagmin V

External Links

Gene Match (Ensembl Protein ID: ENSP00000346265, Human)

Protein Percentage 92.75%
CDS Percentage 91.28%
Ka/Ks Ratio 0.08819 (Ka = 0.0345, Ks = 0.3908)

Syt5 ENSMUSG00000004961 (Mouse)

Gene Details

synaptotagmin V

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070322, Mouse)

Protein Percentage 90.16%
CDS Percentage 85.23%
Ka/Ks Ratio 0.06544 (Ka = 0.0519, Ks = 0.7932)

Syt5 ENSRNOG00000018217 (Rat)

Gene Details

synaptotagmin V (Syt5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024547, Rat)

Protein Percentage 90.67%
CDS Percentage 85.75%
Ka/Ks Ratio 0.07168 (Ka = 0.0511, Ks = 0.713)

Genome Location

Sequence Coding sequence

Length: 1161 bp    Location: 2071711..2078376   Strand: +
>XM_004866677.1
ATGTTCCCAGAGCCCCCGACCCCGGGGCCTCCAGCTTCCGCCGCGCCTCCGGACTCCAGCCGCATCCGCCAGGGCGCAGTGCCGCCCTGGGCCCTGGCCACCATCGTGCTGGTCTCAGGCCTCCTGGTCTTCAGCTGCTGTTTCTGTCTCTGCCGGAAGCGTTGTCGGAGGCGGATGGGCAAGAAGAACCAGGCACAAGCCCAAGTCCACCTTCAGGAAGTGAAGGAGCTGGGCCAGAGTTACATAGACAAGGTGCAGCCAGAAGTAGAGGAGCTGGAGCCCATGCCAGCTGGGCCAGGGCAGCAGGTAGCAGAGAAGCATGAGCTAGGACGACTGCAGTACTCACTGGACTATGACTTTCAGAGTGGTCAGCTGCTGGTGGGCATCCTGCAAGCGGAGGGACTGGCGGCCTTGGACCTGGGTGGCTCCTCGGACCCCTACGTGCGGGTCTACCTGCTACCAGACAAGCGGAGGCGACACGAGACCAAGGTGCATCGGCAGACACTGAACCCACACTTTGGGGAGGCCTTCACCTTCAAGGTCCCCTATGTGGAGCTGGGAGGCAGAGTGCTGGTCATGGCAGTGTACGACTTCGACCGCTTCTCCCGCAATGATGCCATTGGGGAGGTGCGGGTCCCCATGAGCTCAGTGGACTTGGGGCGGCCAGTGCAGGCCTGGCAGGAACTGCAGGCTGCTCCCAGGGAGGAGCTGGAGAAGCTAGGGGACATCTGCTTCTCTCTCCGCTATGTCCCCACGGCTGGGAAGCTCACTGTCATTGTCCTGGAGGCTAAAAACCTGAAGAAGATGGACGTAGGAGGACTGTCAGATCCCTACGTCAAGGTCCACCTGCTGCAGGGGGGCAAAAAGGTGCGGAAGAAGAAAACCACTATCAAGAAGAACACGCTGAACCCCTACTACAATGAGGCCTTCAGCTTTGAGGTGCCCTGTGACCAAGTCCAGAAGGTGCAGGTGGAGCTGACCGTGCTGGACTACGACAAGCTGGGCAGGAACGAGGCGGTCGGGCGGGTGGCGGTGGGCGTGGCCGCCGGCGGGGCTGGCCTGCGGCACTGGGCGGACATGCTGGCCAACCCCCGGCGGCCGGTGGCGCAGTGGCACTCGCTGCGGCCCCCTGACCGAGTGAGGCCACCGCCTGCACCCTGA

Related Sequences

XP_004866734.1 Protein

Syt5 PREDICTED: synaptotagmin-5 isoform X1 [Heterocephalus glaber]

Length: 386 aa      View alignments
>XP_004866734.1
MFPEPPTPGPPASAAPPDSSRIRQGAVPPWALATIVLVSGLLVFSCCFCLCRKRCRRRMGKKNQAQAQVHLQEVKELGQSYIDKVQPEVEELEPMPAGPGQQVAEKHELGRLQYSLDYDFQSGQLLVGILQAEGLAALDLGGSSDPYVRVYLLPDKRRRHETKVHRQTLNPHFGEAFTFKVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVDLGRPVQAWQELQAAPREELEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKVHLLQGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQKVQVELTVLDYDKLGRNEAVGRVAVGVAAGGAGLRHWADMLANPRRPVAQWHSLRPPDRVRPPPAP