Sequence details NCBI ID: XM_004866074.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lmnb2
Gene Name lamin B2
Entrez Gene ID 101716711

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LMNB2 ENSCPOG00000009402 (Guinea pig)

Gene Details

lamin B2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008443, Guinea pig)

Protein Percentage 87.45%
CDS Percentage 86.57%
Ka/Ks Ratio 0.05584 (Ka = 0.0646, Ks = 1.1566)

LMNB2 ENSG00000176619 (Human)

Gene Details

lamin B2

External Links

Gene Match (Ensembl Protein ID: ENSP00000327054, Human)

Protein Percentage 81.82%
CDS Percentage 83.96%
Ka/Ks Ratio 0.06844 (Ka = 0.0926, Ks = 1.3531)

Lmnb2 ENSMUSG00000062075 (Mouse)

Gene Details

lamin B2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000136524, Mouse)

Protein Percentage 80.41%
CDS Percentage 79.42%
Ka/Ks Ratio 0.0642 (Ka = 0.1203, Ks = 1.8732)

Lmnb2 ENSRNOG00000025742 (Rat)

Gene Details

Protein Lmnb2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022336, Rat)

Protein Percentage 80.04%
CDS Percentage 79.48%
Ka/Ks Ratio 0.06691 (Ka = 0.1204, Ks = 1.7998)

Genome Location

Sequence Coding sequence

Length: 1701 bp    Location: 5648209..5630328   Strand: -
Raw sequence   
>XM_004866074.1
ATGAGCGCGCCGAGCCGGGGCCACCGTCGCGATCCGAGCAGGCCGCGAGCAGCAGTAGCCATGGCCTCGCCGGTGCCCAGCCGTGCTGGCGGGTCCGCTACGCCGCTGTCGCCCACGCGCCTGTCGCGGCTGCAGGAGAAGGAGGAGCTGCGGGAGCTCAACGACCGTTTGGCGCACTACATCGACCGCGTCCGCGCGCTCGAGCTCGAGAACGACCGGCTGCTGCTCAAGATCTCGGAGCGCGAGGAAGTGACCACCCGCGAGGTGAGCGGCATCAAGGCACTGTACGAGTCGGAGCTGGCGGACGCCCGAAGGGTCCTGGACGAGACGGCCTGCGAGCGTGCCCGGCTGCAGATCGAGATGGGGAAACTGAGAGCCGAGCTGGAGGAAGTCACCAAGAGTGCCAAGAAGCGGGAGGGCGAGCTCACGGTGGCCCAGGGCCGCGTGAAGGACCTGGAGTCCCTGTTCCACCGGAGCGAGGTGGAGCTGGCCACCGCCCTCAGTGACAAGCGCAGCCTAGAAGGCGACGTGGTGGAGCTCCAGGCGCAGGTGGCCAAGGCAAGGGATGGTCACACGGTGGCCAAGCAGCAGCTGGAGAAGGAGACGCTGATGCGCGTGGACCTGGAGAACCGCTGCCAGAGCCTGCAGGAGGAGCTGGACTTCCAGAAGAGTGTGTTTGAGGAGGAGGTGCAGGAGACACGGAGGCGGCACGAGCGGCGCCTGGTAGAGGTGGACAGCAGCCGGCAGCAGGAGTACGACTTCAAGATGGCACAGGCGCTGGAGGAGCTGCGCAGCCAGCACGATGAACAAGTGCGGCTCTACCGGCTGGAGCTGGAGCAGAGCTACCAGACCAAGCTGGAGAACGCCAGGCTGAGCTCCGACCAGAACAACAAGGCAGCCAGTGCCGCCCGGGAGGAGCTAAAGGAGGCACACATGCGCATTGAGTCCCTCAGCTACCAGCTGTCCAGCCTCCAGAATAAGGCCAGTGCTGACGAGGAGCATATCCGGGAGCTGGAGGCAGCCATGGCTGGGGAGCGGGACAAGTTCCGAAGTGTGCTGGCTGCCAAGGAGCAGGAGATGACACAGATGCGAGACATGATGCAGCAGCAGCTGGCTGAGTACCAGGAGCTGCTGGACGTGAAGCTGGCGCTGGACGTGGAAATCAGTGCCTACCGAAAGCTGCTGGAGGGCGAGGAGGAGCGGCTGAAGCTGACACCCAGCCCGTCCACGAGGGTCACCATCTCACGGGCTACCTCAAGCAGCAGCACCAGCAGTGTGTCCACTGCCAGCCGCCCAGGCCGCAGCAAGCGCCGGCGGCTCCAGGCAGAGGAGACTCCAGGCAGTGGCTCTAGCTCAAGCGGCATTGGCTCGGGCAGCAGCAGTGGTGGCAGCAGCAGCTTCCGCCTGGCACAGCAGGCCTCAGCCACGGGAGGCATCAGCATCGAGGAGGTGGACATGGAAGGCAGGTTCGTGCGACTGAAGAACCACTCGGATAAGGATCAGTCCCTGGGCAACTGGAGGATCAAGAGGCAGGTCTTTGAAGGGGATGAGATTGCCTACAAGTTCACACCCAAATACGTCCTACGGGCCAGTCAAACGGTCACGGTATGGGCAGCAGGCGCAGGGGTTCAGGGAATGGCTGTGCAAACTCCTCGGTCCCGCGTGCGCATGCGCAGCCTCGAGCCCGGTTTGGGGGTCTAG

Related Sequences

XP_004866131.1 Protein

Lmnb2 PREDICTED: lamin-B2 [Heterocephalus glaber]

Length: 566 aa      View alignments
>XP_004866131.1
MSAPSRGHRRDPSRPRAAVAMASPVPSRAGGSATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEREEVTTREVSGIKALYESELADARRVLDETACERARLQIEMGKLRAELEEVTKSAKKREGELTVAQGRVKDLESLFHRSEVELATALSDKRSLEGDVVELQAQVAKARDGHTVAKQQLEKETLMRVDLENRCQSLQEELDFQKSVFEEEVQETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYRLELEQSYQTKLENARLSSDQNNKAASAAREELKEAHMRIESLSYQLSSLQNKASADEEHIRELEAAMAGERDKFRSVLAAKEQEMTQMRDMMQQQLAEYQELLDVKLALDVEISAYRKLLEGEEERLKLTPSPSTRVTISRATSSSSTSSVSTASRPGRSKRRRLQAEETPGSGSSSSGIGSGSSSGGSSSFRLAQQASATGGISIEEVDMEGRFVRLKNHSDKDQSLGNWRIKRQVFEGDEIAYKFTPKYVLRASQTVTVWAAGAGVQGMAVQTPRSRVRMRSLEPGLGV