Sequence details NCBI ID: XM_004865998.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Med16
Gene Name mediator complex subunit 16, transcript variant X3
Entrez Gene ID 101714369

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MED16 ENSCPOG00000022405 (Guinea pig)

Gene Details

mediator complex subunit 16

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016552, Guinea pig)

Protein Percentage 96.86%
CDS Percentage 92.42%
Ka/Ks Ratio 0.01862 (Ka = 0.0133, Ks = 0.7129)

MED16 ENSG00000175221 (Human)

Gene Details

mediator complex subunit 16

External Links

Gene Match (Ensembl Protein ID: ENSP00000325612, Human)

Protein Percentage 91.07%
CDS Percentage 87.1%
Ka/Ks Ratio 0.02884 (Ka = 0.0435, Ks = 1.5079)

Med16 ENSMUSG00000013833 (Mouse)

Gene Details

mediator complex subunit 16

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000129375, Mouse)

Protein Percentage 92.0%
CDS Percentage 85.82%
Ka/Ks Ratio 0.02732 (Ka = 0.0369, Ks = 1.3508)

Med16 ENSRNOG00000011315 (Rat)

Gene Details

mediator complex subunit 16 (Med16), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015257, Rat)

Protein Percentage 92.0%
CDS Percentage 85.94%
Ka/Ks Ratio 0.02789 (Ka = 0.0369, Ks = 1.324)

Genome Location

Sequence Coding sequence

Length: 2595 bp    Location: 7695417..7713603   Strand: +
Raw sequence   
>XM_004865998.1
ATGGCGGCGCCGGAGCTGGGCCGCTGGGGAGAGTACGGGCCGCGGCCGCCCGCTCGGCTGGGCGCACGTGCCGGGCAGCCGGCGACTGCCCTGGGTGCGGTGGGCACCATGGACCTGGCTTATGTCTGTGAGTGGGAGAGATGGCCCAAGAGCACCCACTGCCCCTCGGTGCCCCTGGCCTGCGCTTGGTCCTGCCGCAACCTCATCGCCTTCACCACAGACCTGCGGAATGATGACCAGGACCTGACCCGCATGATCCACATTCTGGACACCGAGCACCCCTGGGACGTGCACTCCATCAACTCAGGCCACAGCGAAGCCATCACCTGCCTGGAGTGGGACCAATCAGGCTCCCGGCTGCTCTCGGCTGATGCAGATGGCCAGATCAAGTGCTGGAGCATGGTGGACCACCTGGCCAACAGCTGGGAGAGCCGTGTGGGTAGCCTGGTGGAAGGAGACCCCATTGTGGCACTGTCTTGGCTGCACAATGGTGTGAAGTTGGCACTGCACGTGGAAAAGTCCGGCGCCTCCAGCTTCAGTGAGAAGTTCTCCCGGGTGAAGTTCTCGCCGTCTCTCACGCTCTTCGGAGGCAAGCCCATGGAGGGCTGGATCGCAGTGACAGTCAGTGGGCTGGTCACCGTGTCCCTGCTGAAACCCAGCGGGCAGGTGCTGACATCCACCGAGAGCCTGTGCCGGCTGCGCGGCCGTGTGGCGCTGGCTGACATCGCCTTCACGGGCGGCGGCAACATCGTGGTGGCCACGGCAGATGGCAGCAGCGCGCTGCCCGTGCAGTTCTACAAGGTGTGCGTGAGCGTGGTCAGCGAGAAGTGCCGCATTGACACCGAGATCCTGCCCTCCCTGTTCATGCGCTGCACCACCGACCCCCACCGCAAGGACCGCTTTCCCGCCATCACCCACCTCAAGTTCCTGGCCCGAGACATGTCCGAGCAGGTGCTGCTCTGCGCGTCCAGCCAAACGAGCAGCCTGGTGGAGTGCTGGTCCCTGCGGAAGGAGGGGCTGCCAGTCAACAACATCTTCCAGCAGATCGCACCTGTCGTTGGCGACAAACAGCCCATGATCCTCAAATGGCGGATCCTCTCAGCCACCAACGACCTGGACCGCGTGTCAGCCGTGGCGCTGCCCAAGCTGCCCATCTCACTCACCAACACTGACCTCAAGGTGGCCAGTGACACCCAGTTCTACCCAGGCCTTGGTCTGGCCCTGGCCTTCCACGACGGCAGTGTCCACATCGTGCACCGGCTCTCGCTGCAAACCATGGCCGTCTTCTACAGCTCAGCCACGGCACGCTCCGTGGACGAGCCGGCCATCAAGCGCTCCCGGGCCACCAGCCCTGCCGTGCACTTCAAGGCCATGCAGCTGTCCTGGACCTCCCTGGCCCTCGTGGGCATCGACAACCACGGGAAGCTCAGCATGCTGCGCATCTCGCCCTCCATGGGCCATGCTTTGGAGCTGGGCCTGGCACTGCGGCACCTGCTCTTCCTGCTAGAGTACTGCATGGTGACCGGCTATGACTGGTGGGATATCCTGCTGCACGTGCAGCCGGGCATGGTGCAGAGCCTGGTGGAGCGGCTGCATGAGGAGTACACACGCCAGAAGGCAGCACTGCAGCAGGTCCTCTCCACCCGGATCTTGGCGATGAAGGCCTCCCTGTGCAGGCTGTCGCCCTGCACCGTGACCCGCGTGTGCGACTACCACACCAAGCTCTTCCTCGTGGCCATCAGCTCCACCCTCAAGTCCCTGCTGTGCCCCCACTTCCTCAACACGCCCGACAAGAGCCCTGGCGACCGGCTGGCCGAGATCTGCTCCAAGATCACCGATGTGGACATTGACAAAGTCATGATCAACCTCAAGACAGAGGAGTTTGTCCTGGACATGAACACACTCCAGGCACTGCAGCAGCTCCTGCAGTGGGTGGGCGACTTCGTGCTCTACCTGCTGGCCAGCCTGCCCAACCAGGGCGCCCCACTGCGTCCGGGCCACAGCTTCCTGAGGGATGGCACCTCTCTGGGCATGCTGCGGGAGCTGATGGTGGTCATCCGCATCTGGGGTCTGCTGAAGCCCAGCTGCCTGCCTGTGTACACAGCCACGTCAGACTCGCAGGACAGCATGTCCCTGCTCTTCCGCCTGCTCACCAAGCTCTGGATATGCTGCCGCGAAGAAGGGCCGGCGAGTGAGCCGGACGAGGCCCTGGTGGACGAGTGCTGCTTGCTGCCCAGTCAGCTGCTGGTGCCCACACTGGACTGGCTGCCCGTCAGCGATGGCCTGGTCAGCCGCCTGCAACCCAAGCAGCCCGTGCGCCTGCAGTTCGGCAAGGCGCCTGTGCTGCCTGGCAGCACCCCCACCATGCAGCTGGATGGCCTGGCCAGGATCCCCGGCCAACCCAAAATCGACCACCTGCGGAGGCTGCACCTGGGTGCCTACCCCACGGAGGAGTGCAAGGCCTGTGCCAGGTGCGGCTGTGTCACCATGCTCAAGTCCCCCAACAAGACAGCAGTGAAGCAGTGGGAGCAGCGCTGGACCAAAAACTGCCTGTGTGGGGGCCTGTGGCGGAGAATGCCCCTCAGCTACTCCTGA

Related Sequences

XP_004866055.1 Protein

Med16 PREDICTED: mediator of RNA polymerase II transcription subunit 16 isoform X3 [Heterocephalus glaber]

Length: 864 aa      View alignments
>XP_004866055.1
MAAPELGRWGEYGPRPPARLGARAGQPATALGAVGTMDLAYVCEWERWPKSTHCPSVPLACAWSCRNLIAFTTDLRNDDQDLTRMIHILDTEHPWDVHSINSGHSEAITCLEWDQSGSRLLSADADGQIKCWSMVDHLANSWESRVGSLVEGDPIVALSWLHNGVKLALHVEKSGASSFSEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVALADIAFTGGGNIVVATADGSSALPVQFYKVCVSVVSEKCRIDTEILPSLFMRCTTDPHRKDRFPAITHLKFLARDMSEQVLLCASSQTSSLVECWSLRKEGLPVNNIFQQIAPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFHDGSVHIVHRLSLQTMAVFYSSATARSVDEPAIKRSRATSPAVHFKAMQLSWTSLALVGIDNHGKLSMLRISPSMGHALELGLALRHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVERLHEEYTRQKAALQQVLSTRILAMKASLCRLSPCTVTRVCDYHTKLFLVAISSTLKSLLCPHFLNTPDKSPGDRLAEICSKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLASLPNQGAPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDSQDSMSLLFRLLTKLWICCREEGPASEPDEALVDECCLLPSQLLVPTLDWLPVSDGLVSRLQPKQPVRLQFGKAPVLPGSTPTMQLDGLARIPGQPKIDHLRRLHLGAYPTEECKACARCGCVTMLKSPNKTAVKQWEQRWTKNCLCGGLWRRMPLSYS