Sequence details NCBI ID: XM_004865980.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Polr2e
Gene Name polymerase (RNA) II (DNA directed) polypeptide E, 25kDa, transcript variant X2
Entrez Gene ID 101709249

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POLR2E ENSCPOG00000001542 (Guinea pig)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001395, Guinea pig)

Protein Percentage 99.05%
CDS Percentage 93.17%
Ka/Ks Ratio 0.00683 (Ka = 0.004, Ks = 0.5858)

POLR2E ENSG00000099817 (Human)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000215587, Human)

Protein Percentage 98.57%
CDS Percentage 91.27%
Ka/Ks Ratio 0.0059 (Ka = 0.0059, Ks = 1.0035)

Polr2e ENSMUSG00000004667 (Mouse)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide E

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004786, Mouse)

Protein Percentage 98.1%
CDS Percentage 86.51%
Ka/Ks Ratio 0.0033 (Ka = 0.0081, Ks = 2.4639)

Polr2e ENSRNOG00000013545 (Rat)

Gene Details

polymerase (RNA) II (DNA directed) polypeptide E (Polr2e), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018169, Rat)

Protein Percentage 98.1%
CDS Percentage 87.14%
Ka/Ks Ratio 0.00416 (Ka = 0.0082, Ks = 1.9637)

Genome Location

Sequence Coding sequence

Length: 633 bp    Location: 7547459..7553282   Strand: +
Raw sequence   
>XM_004865980.1
ATGGACGACGAGGAGGAGACTTATCGGCTCTGGAAAATCCGAAAGACCATCATGCAGTTGTGCCACGACCGTGGCTACCTGGTGACCCAGGACGAGTTGGATCAGACATTGGAGGAGTTTAAATCCCAGTTTGGGGACAAGCCGAGTGAAGGGCATCCACGGCGCACTGACCTCACCGTGCTGGTGGCTCACAATGATGACCCCACAGACCAGATGTTTGTCTTCTTTCCAGAGGAACCCAAGGTGGGCATCAAGACCATCAAGGTGTACTGCCAGCGCATGCAGGAGGAGAACATCACCCGCGCGCTTATTGTGGTGCAGCAGGGCATGACACCTTCTGCCAAGCAGTCTCTGGTGGACATGGCGCCCAAGTACATTCTAGAGCAGTTCCTGCAGCAGGAGCTGTTGATCAACATCACGGAGCACGAGCTGGTACCAGAGCACGTTGTCATGACCAAGGAGGAGGTGACAGAGCTGCTGGCCCGATATAAACTCCGGGAGAACCAGCTGCCCCGCATTCAGGCAGGGGACCCCGTGGCCCGCTACTTTGGGATAAAGCGAGGGCAGGTGGTGAAGATCATCCGGCCCAGTGAGACAGCGGGCAGGTACATCACTTACCGGCTGGTGCAGTAG

Related Sequences

XP_004866037.1 Protein

Polr2e PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2 [Heterocephalus glaber]

Length: 210 aa      View alignments
>XP_004866037.1
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKSQFGDKPSEGHPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ