Details from NCBI annotation

Gene Symbol Tcf3
Gene Name transcription factor 3, transcript variant X5
Entrez Gene ID 101725133

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TCF3 ENSCPOG00000023586 (Guinea pig)

Gene Details

transcription factor 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018964, Guinea pig)

Protein Percentage 87.05%
CDS Percentage 85.39%
Ka/Ks Ratio 0.11503 (Ka = 0.0724, Ks = 0.6291)

TCF3 ENSG00000071564 (Human)

Gene Details

transcription factor 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000262965, Human)

Protein Percentage 81.86%
CDS Percentage 82.48%
Ka/Ks Ratio 0.11535 (Ka = 0.0948, Ks = 0.8216)

Tcf3 ENSMUSG00000020167 (Mouse)

Gene Details

transcription factor 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100979, Mouse)

Protein Percentage 78.66%
CDS Percentage 78.3%
Ka/Ks Ratio 0.11183 (Ka = 0.1226, Ks = 1.0959)

Tcf3 ENSRNOG00000016970 (Rat)

Gene Details

transcription factor 3 (Tcf3), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023473, Rat)

Protein Percentage 78.04%
CDS Percentage 78.87%
Ka/Ks Ratio 0.12449 (Ka = 0.1243, Ks = 0.9986)

Genome Location

Sequence Coding sequence

Length: 1938 bp    Location: 7092192..7119970   Strand: +
>XM_004865936.1
ATGAGCCAGCCCCAGAGGATGGCACCAGTGGGCACCGACAAGGAGCTGAGTGACCTTCTGGACTTCAGCATGATGTTCCCACTGCCCGTGGCCAATGGAAAGGGCCGGCCCACCTCCCTGGCTGGAGCCCAGTTTGGAGGTTCAGGTCTTGAGGACCGGTCCACCTCAGGAACCTGGGGCCCCAGTGATCAGAACAATTCCTCTTTCGACCCCAGCCGGACCTACAGCGAAGGCGCCCACTTCAGTGACTCCCACGGCGGCCTCTCAACACCCGCGTTCCTGGGATCTGGGCTTGGAGGCAAGGGTGGTGAGCGGGGCACGTACCCTGCCTTCGGGAGAGAAGCGGGTGTTGGCGGCTTGACTCAGGCTGGCTTCCTACCAGGAGAGCTGGCCCTGAGCAGCCCCGGACCGCTGTCACCCTCGGGCATCAAGGGCAGCTCGGCATATTACCCCTCCTTCCCCAGCAACCCCCGGCGGAGAGCCGCGGACAGCGGCCTGGACTCGCAGCCTAAGAAGGGCCGGAAGGTCCCACCCGGTCTTCCTTCCTCGGTGTACCCTCCCAGCTCAGGTGATGACTATGGTAGGGACGCCGCCTACCCCTCCGACAAGACCCCTGGCAGTACCTACCCCGCCCCCTTCTACATGGCAGATGGCAGCCTACACCCCTCAGCAGAGCTCTGGAGCCCCCCAGGCCAGGCGGGCTTCGGGCCCATGCTGAGCGGCGCCTCGTCCCCACTGCCTTTGGCACCTGGTGCTGGCAGCTCTGTAGGCAGTGGTGCATTTGGCGGTCTCCAGCAGCCTGAGCGCATGGGCTACCAGCTGCATGGAGCCGAGGGCAACGGTGCCCTCCCAGCTGTGGCCTCCTTCTCCTCGGGTCCTGGAGCTGCCTACAGCAGCGTCTCGAGCCACACGCCGCCCGTGACCGGGGCCGACAGCCTCCTAGGCTCCCGTGGGACTTCGGCTGGCAGCTCCGGGGACGCCCTTGGGAAGGCCCTGGCCTCGATCTACTCCCCGGATCACTCCAGCAGTAACTTCTCACCCAGCCCCTCGACCCCTGCAGGCTCCCCACACGGCCTGGCCGGGACGTCGCAGTGGTCCCGAGCAGGAGCCCCTGGTGCCTTATCACCCAGCTATGATGGGGGACTCCACGCCCTGAACAAGATGGAGGACCACCTGGACGAGGCGATCCACGTGCTCCGCAGCCACGCCGTGGGGACTGCGGGTGACATGCACAGCCTGCTGCCCGGCCATGGTGCTCTGGCCTCCAGTTTTGCTAGCCCCATGCCGCTGGGAGGTCGCCACACAGGCCTGGTTGGGGGCGGCCACTCCGAGGATGGGCTCGGGGCCAGTGCCAGCCTCCTGCACAACCATGCAGCCCTCCCCAGCCAGCCTGGTACCTTGCCCGACCTTGCCCGGCCACCTGACTCCTACAGTGGGCTGGGTCGGGCTGGCGCCGCGGTGGGCGCAGGCGAGATCAAGAGGGAGGAAAAGGAGGACGAGGAGAACACGTCTGCGGCCGACCCGGCAGAAGAGGAGAGGAAGGAGCTGAAGGCCCCGCGCGCACGGACCAGTACGGAAGAGGTGCTGTCCCTGGAGGAGAAGGACCTGAGGGACCGGGAGAGGCGCATGGCCAATAACGCGCGGGAGCGGGTGCGCGTGCGCGACATTAACGAGGCCTTCCGGGAGCTGGGGCGCATGTGTCAGCTGCACCTCAAGTCCGACAAGGCGCAGACCAAGCTGCTCATCCTGCAGCAGGCTGTGCAGGTCATCCTGGGCCTGGAGCAGCAGGTGCGAGAGCGCAACCTGAACCCCAAAGCTGCCTGCCTGAAGCGACGAGAAGAGGAAAAGGTGTCAGGCGTGGTCGGGGATCCCCAGATGGTGCTTCCGGCTGCCCACCCGGGCCTCAACGATGCCCACAATCCCACTGGGCACATGTGA

Related Sequences

XP_004865993.1 Protein

Tcf3 PREDICTED: transcription factor E2-alpha isoform X5 [Heterocephalus glaber]

Length: 645 aa      View alignments
>XP_004865993.1
MSQPQRMAPVGTDKELSDLLDFSMMFPLPVANGKGRPTSLAGAQFGGSGLEDRSTSGTWGPSDQNNSSFDPSRTYSEGAHFSDSHGGLSTPAFLGSGLGGKGGERGTYPAFGREAGVGGLTQAGFLPGELALSSPGPLSPSGIKGSSAYYPSFPSNPRRRAADSGLDSQPKKGRKVPPGLPSSVYPPSSGDDYGRDAAYPSDKTPGSTYPAPFYMADGSLHPSAELWSPPGQAGFGPMLSGASSPLPLAPGAGSSVGSGAFGGLQQPERMGYQLHGAEGNGALPAVASFSSGPGAAYSSVSSHTPPVTGADSLLGSRGTSAGSSGDALGKALASIYSPDHSSSNFSPSPSTPAGSPHGLAGTSQWSRAGAPGALSPSYDGGLHALNKMEDHLDEAIHVLRSHAVGTAGDMHSLLPGHGALASSFASPMPLGGRHTGLVGGGHSEDGLGASASLLHNHAALPSQPGTLPDLARPPDSYSGLGRAGAAVGAGEIKREEKEDEENTSAADPAEEERKELKAPRARTSTEEVLSLEEKDLRDRERRMANNARERVRVRDINEAFRELGRMCQLHLKSDKAQTKLLILQQAVQVILGLEQQVRERNLNPKAACLKRREEEKVSGVVGDPQMVLPAAHPGLNDAHNPTGHM