Sequence details NCBI ID: XM_004865887.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Jsrp1
Gene Name junctional sarcoplasmic reticulum protein 1
Entrez Gene ID 101712353

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

JSRP1 ENSG00000167476 (Human)

Gene Details

junctional sarcoplasmic reticulum protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000300961, Human)

Protein Percentage 69.66%
CDS Percentage 77.3%
Ka/Ks Ratio 0.26368 (Ka = 0.197, Ks = 0.7473)

Jsrp1 ENSMUSG00000020216 (Mouse)

Gene Details

junctional sarcoplasmic reticulum protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137666, Mouse)

Protein Percentage 56.48%
CDS Percentage 68.62%
Ka/Ks Ratio 0.36531 (Ka = 0.3338, Ks = 0.9137)

Jsrp1 ENSRNOG00000032951 (Rat)

Gene Details

junctional sarcoplasmic reticulum protein 1 (Jsrp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047240, Rat)

Protein Percentage 54.93%
CDS Percentage 68.46%
Ka/Ks Ratio 0.36471 (Ka = 0.3326, Ks = 0.9119)

Genome Location

Sequence Coding sequence

Length: 1158 bp    Location: 6631625..6635194   Strand: +
Raw sequence   
>XM_004865887.1
ATGACAACCAGAGGCTTGGAGGAGCTGGACCAGGGCCTGGGCAGCTGCCTGGCCGGTGAAGACCTCTCTGCGCTGGCAGAGGCCACCCTGGGGTGGCTGCAGGAGGACAAGGCCCGAGCAACACCCAGAGTGGCTGAGACCAGCAGCTGGCCTCAGGTCTCTCAGGAGCTGCAGGCAGGGAGTGGTGTGGATGCCAGGCCCAAAAAGATGGAGAAGGAGCCTATGGCCAGGGGGACCCCAGACCTCGGAAGGGAGGAGCTGAAATCTGGAGCGCCTCCCCGGAGCGCCCCGGCCCGAAAGAAGACGCAGGCCGAGCCCCTCGCGCAGCCGCCCCCGCCGCCCCCTGCCCTGAGCGAGGAGCTGCCCTGGGGAGACGTGACGCTCAACAAGTGCCTGGTCCTGGCCTCGCTGGTGGCGCTGCTGGGCTCGGCTTTCCAGCTGTGCCGCGACGCTGTGACTGCAGAGGAGGCTGTGCCCACCCCGTGGATCCCACCCATCTCAGCCCCCAAGGCCCTGGCATCACCCGCGGTAAGCACTTCCTTCCAGTGTCCCTGGGCAGTGGGTGCCCATCCAGGGGTGGGGAGGCCGGGTGGTGAGAGAAGTGGGTTTGGGGCCCAGGATACCACACTGTCCACATTGCAGCCTAAGCCTTCGGCCTGGGCACCCCCATCGAGACCCCCCGCGCCCAAGGTGGGGCCACCCACACCTCAGGCAGAGGCAGGGGACAAGCCCAAGGTTCCCAGGAGCCGGGAGGCTGCAGAGAAGGTGCAGGGAGATCCTGGGGAGGCCACAGGAGAGGCCGCTGAGGAGCACGCGGCCCCCGCTGAGCAAGCACCCAAAGAGAAGCAAAGGAAGGAGGAGAAGCCGCGGAAGGAGAGGCCGTGGAAAGAGGAGACGCCCTGGAAGAAGAAACTTCGGAAGGAGGAGAGGCTGAGGAAGGAGAGACCGAAGAAGGAGGAGAGGCCACGGGGTGCCAGGGAACCCAGGGAAGCTCTGCCTCGACGCTGGGGGGGGCGTGAAGGGGGCCATCGGCCGTGGGCGCGGGAATCCAGGGACCTGGAGCACCAGAAAAGGCAGGCCTGGGCTTCCCCGAGGCACTCCGAAGAGGACAGGCCCCGGGGCAGACAGAAGCACCAACTGGGCAAAGGGCGGGACTGA

Related Sequences

XP_004865944.1 Protein

Jsrp1 PREDICTED: junctional sarcoplasmic reticulum protein 1 [Heterocephalus glaber]

Length: 385 aa      
>XP_004865944.1
MTTRGLEELDQGLGSCLAGEDLSALAEATLGWLQEDKARATPRVAETSSWPQVSQELQAGSGVDARPKKMEKEPMARGTPDLGREELKSGAPPRSAPARKKTQAEPLAQPPPPPPALSEELPWGDVTLNKCLVLASLVALLGSAFQLCRDAVTAEEAVPTPWIPPISAPKALASPAVSTSFQCPWAVGAHPGVGRPGGERSGFGAQDTTLSTLQPKPSAWAPPSRPPAPKVGPPTPQAEAGDKPKVPRSREAAEKVQGDPGEATGEAAEEHAAPAEQAPKEKQRKEEKPRKERPWKEETPWKKKLRKEERLRKERPKKEERPRGAREPREALPRRWGGREGGHRPWARESRDLEHQKRQAWASPRHSEEDRPRGRQKHQLGKGRD