Details from NCBI annotation

Gene Symbol Lingo3
Gene Name leucine rich repeat and Ig domain containing 3
Entrez Gene ID 101709477

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LINGO3 ENSCPOG00000006341 (Guinea pig)

Gene Details

leucine rich repeat and Ig domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005715, Guinea pig)

Protein Percentage 93.07%
CDS Percentage 90.41%
Ka/Ks Ratio 0.02601 (Ka = 0.0327, Ks = 1.258)

LINGO3 ENSG00000220008 (Human)

Gene Details

leucine rich repeat and Ig domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000467753, Human)

Protein Percentage 93.07%
CDS Percentage 89.47%
Ka/Ks Ratio 0.03114 (Ka = 0.0323, Ks = 1.0373)

Lingo3 ENSMUSG00000051067 (Mouse)

Gene Details

leucine rich repeat and Ig domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054960, Mouse)

Protein Percentage 88.29%
CDS Percentage 83.02%
Ka/Ks Ratio 0.02153 (Ka = 0.0562, Ks = 2.6127)

Lingo3 ENSRNOG00000032569 (Rat)

Gene Details

leucine rich repeat and Ig domain containing 3 (Lingo3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051446, Rat)

Protein Percentage 88.29%
CDS Percentage 83.25%
Ka/Ks Ratio 0.01937 (Ka = 0.0553, Ks = 2.8529)

Genome Location

Sequence Coding sequence

Length: 1779 bp    Location: 6592957..6609665   Strand: +
>XM_004865879.1
ATGACCTGCTGGCTGCGTGTGCTCAGTCTGCAACTCCTGCTGCTGCCTGCAGCGCAGCCCCCTGTGCAGGGCTGCCCGGCCCGCTGCGAGTGCACGGTCCTGACGCGTGCAGTGGCCTGTGGGCGCCGCCGCCTGACTGCTGTGCCGGACGGCATCCCTGCTGAGACGCGCGTGCTGGAGCTGAGCCGCAACCGCATCCGCTGCCTGAACCCGGGCGACCTGGCCTCGCTGCCGGCGCTGGAGGAGCTGGACCTCAGCCTCAACGCCCTCGCGCACGTGGAGCCCGGCGCCTTCGCCAACCTGCCATGCCTGCGTGTCCTGCGTCTCCGTGGCAACCAGCTCAAGCTCATCCCTCCCGGGGTCTTCACGCGCCTGGACAACCTCACCCTGCTGGATCTGAGCGAGAACAAGTTGGTGATCCTCTTGGACTACACGTTCCAGGACCTGCACAGCCTGCGCACGCTGGAGGTGGGTGACAACGACCTGGTGTTCATCTCACGCAGGGCCTTCGCGGGGCTGCTGGCGCTCGAGGAGCTGACCCTGGAGCGCTGCAACCTCACGGCCCTGTCCGGGGAGTCTCTGGGCCACCTGCGAGGCCTGGGCGCCCTTCGGCTGCGACACCTGGCCATCGCCACCCTGGAGGACCAGAACTTCTGCAGGCTGCCGGGGCTCCTGCACCTGGAGATTGACTATTGGCCGCTGCTGGAGGAGGTGGCCGCGGGCAGCCTCCGGGGCCTCAATCTGACCTCGCTCTCGGTCACACACACCAACATCACCGCCGTCCCCGCAGCAGCGCTCCGCCACCAGGCGCACCTGACCTGCCTCAATCTGTCCCACAACCCCATCAGCACGGTGCCGCGAGGGTCCTTTAGGGACCTGGTGCGCCTGCGCGAGCTTCACCTCGCCGGGGCTCTGCTGGCCATCGTGGAGCCCCAGGCCTTCCTGGGCCTGCGACAGATCCGCCTACTCAACCTTTCCAACAACCTCCTCTCCACGCTGGAGGAGAGCACGTTCCACTCGGTCAACACGCTGGAGACGTTGCGCGTGGACGGGAACCCGCTGGCCTGCGACTGTCGCCTGCTCTGGATCGTCCAGCGTCGCAAGACCCTAAACTTCGACGGGCGGCTGCCGGCCTGCGCCACCCCGGCCGAGGTGCGCGGCGACGCCCTGCGCAAACTGCCCGACTCGGTGCTCTTTGAATATTTCGTGTGCCACAAACCCAAGATCCGAGAGCGCCGGCTGCAGCACGTCACGGCCACCGAGGGCGACGACGTGCACTTCCTGTGCCGCGCCGAGGGCGAGCCAGCACCTGCAGTGGCCTGGGTGACGCCGCAGCACAGGGCGGTGACGGCCGTCAGCGCCGGGCGCGCGCGCGTGCTGCCCGGGGGCACGCTGGAGATCCTGGACACGCGGCCGCGGGACAGCGGCACCTACACGTGCGTGGCCAGCAACGCCGGCGGCAACGACACCTACTTCGCCACTCTGACTGTGCGTCCCGAGCCCGCCGCCAACCGGACCCCGGGCGACGCGCGCAACGAGACGCAGGCGGCCGCGCGCTTCCCGCTGGACCTCACCACGGTCCTGGTGTCCGCGGCCATGGGCTGCATCACATTCCTGGGCGTCGTGCTCTTCTGCTTCCTGCTGCTCTTCGTGTGGAGCCGCGGCCGCGGGCAGCACAAGAACCACTTCTCGGTGGAGTACTCGTTCCGCAAGGTGGACGGGCCCGCCGCCACCGCCGGCCAGGGGGGCGCGCGCAAGTTCAACATGAAGATGATATGA

Related Sequences

XP_004865936.1 Protein

Lingo3 PREDICTED: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 [Heterocephalus glaber]

Length: 592 aa      View alignments
>XP_004865936.1
MTCWLRVLSLQLLLLPAAQPPVQGCPARCECTVLTRAVACGRRRLTAVPDGIPAETRVLELSRNRIRCLNPGDLASLPALEELDLSLNALAHVEPGAFANLPCLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRTLEVGDNDLVFISRRAFAGLLALEELTLERCNLTALSGESLGHLRGLGALRLRHLAIATLEDQNFCRLPGLLHLEIDYWPLLEEVAAGSLRGLNLTSLSVTHTNITAVPAAALRHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAIVEPQAFLGLRQIRLLNLSNNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLLWIVQRRKTLNFDGRLPACATPAEVRGDALRKLPDSVLFEYFVCHKPKIRERRLQHVTATEGDDVHFLCRAEGEPAPAVAWVTPQHRAVTAVSAGRARVLPGGTLEILDTRPRDSGTYTCVASNAGGNDTYFATLTVRPEPAANRTPGDARNETQAAARFPLDLTTVLVSAAMGCITFLGVVLFCFLLLFVWSRGRGQHKNHFSVEYSFRKVDGPAATAGQGGARKFNMKMI