Details from NCBI annotation

Gene Symbol Lsm7
Gene Name LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
Entrez Gene ID 101709127

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LSM7 ENSCPOG00000014025 (Guinea pig)

Gene Details

LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014750, Guinea pig)

Protein Percentage 70.87%
CDS Percentage 76.05%
Ka/Ks Ratio 0.11371 (Ka = 0.1943, Ks = 1.7084)

LSM7 ENSG00000130332 (Human)

Gene Details

LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000252622, Human)

Protein Percentage 100.0%
CDS Percentage 92.56%
Ka/Ks Ratio 0.001 (Ka = 0.0009, Ks = 0.8525)

Lsm7 ENSRNOG00000019552 (Rat)

Gene Details

LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae) (Lsm7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026551, Rat)

Protein Percentage 98.06%
CDS Percentage 89.0%
Ka/Ks Ratio 0.00754 (Ka = 0.008, Ks = 1.0649)

Genome Location

Sequence Coding sequence

Length: 312 bp    Location: 6576723..6584303   Strand: +
>XM_004865878.1
ATGGCGGACAAAGAGAAGAAGAAGAAGGAGAGCATCTTGGATCTGTCCAAGTATATTGACAAGACAATCCGGGTGAAGTTCCAGGGGGGGCGCGAAGCCAGTGGAATCCTGAAGGGCTTCGACCCACTGCTCAACCTCGTGCTAGACGGGACCATTGAGTACATGCGAGACCCCGACGACCAGTACAAGCTGACGGAGGACACGCGGCAGCTGGGCCTGGTGGTGTGCCGTGGCACGTCGGTGGTGCTCATCTGCCCGCAGGATGGCATGGAGGCCATCCCCAACCCCTTCATCCAGCAGCAGGACGCCTAG

Related Sequences

XP_004865935.1 Protein

Lsm7 PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Heterocephalus glaber]

Length: 103 aa     
>XP_004865935.1
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA