Details from NCBI annotation

Gene Symbol Nfic
Gene Name nuclear factor I/C (CCAAT-binding transcription factor), transcript variant X9
Entrez Gene ID 101716128

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NFIC ENSCPOG00000026178 (Guinea pig)

Gene Details

nuclear factor I/C (CCAAT-binding transcription factor)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016509, Guinea pig)

Protein Percentage 96.27%
CDS Percentage 91.15%
Ka/Ks Ratio 0.03774 (Ka = 0.0225, Ks = 0.5964)

NFIC ENSG00000141905 (Human)

Gene Details

nuclear factor I/C (CCAAT-binding transcription factor)

External Links

Gene Match (Ensembl Protein ID: ENSP00000396843, Human)

Protein Percentage 98.13%
CDS Percentage 92.37%
Ka/Ks Ratio 0.01227 (Ka = 0.0084, Ks = 0.681)

Nfic ENSMUSG00000055053 (Mouse)

Gene Details

nuclear factor I/C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020461, Mouse)

Protein Percentage 95.79%
CDS Percentage 88.47%
Ka/Ks Ratio 0.01736 (Ka = 0.0201, Ks = 1.1584)

Nfic ENSRNOG00000004505 (Rat)

Gene Details

nuclear factor I/C (Nfic), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006168, Rat)

Protein Percentage 96.03%
CDS Percentage 88.86%
Ka/Ks Ratio 0.01847 (Ka = 0.0192, Ks = 1.0384)

Genome Location

Sequence Coding sequence

Length: 1287 bp    Location: 5940011..5897009   Strand: -
>XM_004865807.1
ATGTATTCGTCCCCGCTGTGTCTGACCCAGGATGAGTTCCACCCGTTCATCGAGGCGCTGCTGCCGCATGTGCGCGCCTTCGCCTACACCTGGTTCAACCTGCAGGCGCGGAAGCGTAAGTACTTCAAGAAGCATGAGAAGCGGATGTCCAAGGACGAGGAGCGGGCCGTGAAGGACGAGCTGCTGGGCGAGAAGGCCGAGGTGAAGCAGAAGTGGGCGTCGCGGCTGCTGGCCAAGCTGCGCAAGGACATCCGGCCCGAGTGCCGCGAGGACTTCGTGCTGGCCATCACGGGCAAGAAGGCGCCGGGCTGCGTGCTGTCCAACCCCGACCAGAAGGGCAAGATGCGGCGCATCGACTGCCTGCGCCAGGCCGACAAGGTGTGGCGCCTCGACCTGGTCATGGTCATCCTGTTCAAGGGCATCCCGCTCGAGAGCACGGACGGCGAGCGGCTGGTGAAGGCTGCGCAGTGCGGCCACCCGGTGCTCTGCGTGCAGCCGCACCACATCGGCGTGGCCGTCAAGGAGCTGGACCTCTACCTGGCCTACTTCGTGCGCGAGCGAGATGCCGAGCAGAGCAGCAGTCCCCGGGCGGGGATGGGCTCGGAGCAGGAAGACAGCAAGCCCATCACGCTGGACACAACTGACTTCCAGGAGAGCTTTGTCACCTCCGGCGTGTTCAGTGTCACCGAACTCATCCAAGTGTCTCGGACACCGGTGGTGACCGGAACAGGTCCCAACTTCTCTCTGGGAGAGCTGCAGGGGCACTTGGCCTACGACCTGAATCCAGCCAGTACCGGCATGAGAAGAACGCTCCCCAGCACCTCTTCCAGCGGGAGCAAGAGGCACAAATCGGGCTCCATGGAGGAAGACGTGGACACGAGCCCTGGCGGAGACTACTACACTTCTCCCAGTTCTCCCACGAGTAGCAGCCGCAACTGGACGGAGGACATGGAAGGAGGCATCTCCTCCCCAGTGAAGAAGACGGAGATGGACAAGTCCCCATTCAACAGCCCATCCCCCCAGGACTCGCCCCGCCTCTCCAGCTTCACCCAGCACCACCGGCCTGTCATCGCAGTGCACAGCGGGATCACCCGGAGTCCCCACCCGCCCTCCGCCCTGCACTTCCCCACGACCTCCATCCTGCCCCAGACGGCCTCCACCTACTTCCCGCACACAGCCATCCGCTACCCACCCCACCTCAACCCCCAGGACCCACTCAAAGATCTCGTCTCGCTGGCCTGCGACCCGGCCAGCCAGCAGCCCGGACCGTCCTGGTACCTGGGGTAG

Related Sequences

XP_004865864.1 Protein

Nfic PREDICTED: nuclear factor 1 C-type isoform X9 [Heterocephalus glaber]

Length: 428 aa      View alignments
>XP_004865864.1
MYSSPLCLTQDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMSKDEERAVKDELLGEKAEVKQKWASRLLAKLRKDIRPECREDFVLAITGKKAPGCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAAQCGHPVLCVQPHHIGVAVKELDLYLAYFVRERDAEQSSSPRAGMGSEQEDSKPITLDTTDFQESFVTSGVFSVTELIQVSRTPVVTGTGPNFSLGELQGHLAYDLNPASTGMRRTLPSTSSSGSKRHKSGSMEEDVDTSPGGDYYTSPSSPTSSSRNWTEDMEGGISSPVKKTEMDKSPFNSPSPQDSPRLSSFTQHHRPVIAVHSGITRSPHPPSALHFPTTSILPQTASTYFPHTAIRYPPHLNPQDPLKDLVSLACDPASQQPGPSWYLG