Details from NCBI annotation

Gene Symbol Sgta
Gene Name small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, transcript variant X6
Entrez Gene ID 101712587

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGTA ENSCPOG00000000638 (Guinea pig)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000562, Guinea pig)

Protein Percentage 82.75%
CDS Percentage 83.07%
Ka/Ks Ratio 0.13148 (Ka = 0.1126, Ks = 0.8566)

SGTA ENSG00000104969 (Human)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000221566, Human)

Protein Percentage 83.39%
CDS Percentage 79.87%
Ka/Ks Ratio 0.06483 (Ka = 0.108, Ks = 1.6663)

Sgta ENSMUSG00000004937 (Mouse)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005067, Mouse)

Protein Percentage 80.51%
CDS Percentage 79.55%
Ka/Ks Ratio 0.1272 (Ka = 0.1361, Ks = 1.0698)

Sgta ENSRNOG00000019891 (Rat)

Gene Details

small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha (Sgta), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026960, Rat)

Protein Percentage 80.51%
CDS Percentage 78.49%
Ka/Ks Ratio 0.10517 (Ka = 0.1368, Ks = 1.3003)

Genome Location

Sequence Coding sequence

Length: 945 bp    Location: 5854399..5832302   Strand: -
>XM_004865791.1
ATGGACAACAAGAAGCGCCTGGCCTACGCCATCATCCAGTTCCTGCATGACCAGCTGCGGCATGGCGGGCTCTCATCGGATGCCCAGGAGAGCCTGGAAGTTGCCATTCAATGCCTGGAGACCGCGTTCGGGGTGACGACGGAGGACAGCGACCTGGCGCTCCCCCAGACCCTGCCGGAGATATTTGAAGCAGCTGCTTTAGGCAAGGAGGTGCCGCAGGACCTGAGGAGCCCTGAGCGGACCCCACCCTCCGAGGAGGACTCGGCTGAGGCGGAGCGCCTCAAAACCGAAGGGAATGAGCAGATGAAGGTGGAGAACTTTGAGGCTGCCGTGCACCTCTACGGCAAGGCCATCGAGCTGAACCCTGCCAATGCCGTCTACTTCTGTAACAGAGCGGCGGCCTACAGCAAGCTGGGGAACTACGCAGGCGCCGTGCAGGACTGCGAGCGTGCTATCTGCATCGACCCTACCTACAGCAAGGCCTACGGCCGCATGGGCCTGGCGCTGTCCAGCCTGAACAAGCATGGGGAGGCTGTGGCCTACTACAAGAAGGCCCTGGAGCTGGACCCCGACAATGAGACCTACAAGTCCAACCTCAAGATAGAAGAGCTGAAGCTCAGAGAGGCACCGAGCCCTACGGGCAGTGTGGGCGGCTTCGACATTGCTGGCTTGCTGAACAACCCAAGCTTCATAAACATGGCATCAAGCTTAATGAACAACCCCCAGCTCCAGCAGCTCATGTCCGGGATGATTTCGGGAAGCCACAACCCCTTGGGGACCCCAGGCACCAGCCCTTCACAGAATGACCTGAGCAGCCTCATCCAGGCCCGAGCCAGCGCCATCCTGTCCTTCCTGGCTGACCAGAAACCTTTGAGTGTTTTGCCGTTTTCTCTCATTGGACTGCTCAAGAGAGAACCAGAAGATGAAGTCGGGCCTGCATGTTAG

Related Sequences

XP_004865848.1 Protein

Sgta PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X6 [Heterocephalus glaber]

Length: 314 aa      View alignments
>XP_004865848.1
MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTTEDSDLALPQTLPEIFEAAALGKEVPQDLRSPERTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHLYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPTYSKAYGRMGLALSSLNKHGEAVAYYKKALELDPDNETYKSNLKIEELKLREAPSPTGSVGGFDIAGLLNNPSFINMASSLMNNPQLQQLMSGMISGSHNPLGTPGTSPSQNDLSSLIQARASAILSFLADQKPLSVLPFSLIGLLKREPEDEVGPAC