Details from NCBI annotation

Gene Symbol Chaf1a
Gene Name chromatin assembly factor 1, subunit A (p150), transcript variant X2
Entrez Gene ID 101699676

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHAF1A ENSCPOG00000011635 (Guinea pig)

Gene Details

chromatin assembly factor 1, subunit A (p150)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010465, Guinea pig)

Protein Percentage 71.76%
CDS Percentage 78.41%
Ka/Ks Ratio 0.23662 (Ka = 0.1832, Ks = 0.7744)

CHAF1A ENSG00000167670 (Human)

Gene Details

chromatin assembly factor 1, subunit A (p150)

External Links

Gene Match (Ensembl Protein ID: ENSP00000301280, Human)

Protein Percentage 75.88%
CDS Percentage 80.27%
Ka/Ks Ratio 0.16182 (Ka = 0.1366, Ks = 0.8445)

Chaf1a ENSMUSG00000002835 (Mouse)

Gene Details

chromatin assembly factor 1, subunit A (p150)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002914, Mouse)

Protein Percentage 68.96%
CDS Percentage 72.91%
Ka/Ks Ratio 0.12602 (Ka = 0.2042, Ks = 1.6202)

Chaf1a ENSRNOG00000046479 (Rat)

Gene Details

Protein Chaf1a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063994, Rat)

Protein Percentage 69.56%
CDS Percentage 72.96%
Ka/Ks Ratio 0.13311 (Ka = 0.2031, Ks = 1.5262)

Genome Location

Sequence Coding sequence

Length: 2838 bp    Location: 5301861..5266682   Strand: -
>XM_004865745.1
ATGCTGGAGGAGCCGGAGTGCGCGGCGCCGGGCGCCAGGGGAGCGGCCGCAGCCATGGATTGCAAAGACAGACCAACCTTCCCAGCAAAGAAGCTGATACAAGCCCGTCTGCCATTCAAGCGCCTGAATGTTGCCCATAAGGAGAAAGCCGAGGATGAGTCAGGCGACACAAGCTCTCAGAACATCTTGGTAGAAGAGAAAGTCACTGATATAGAAGCCTCTTTGGGCATCCTGGAGAATGACTGTCATGTGGATTCCGACCTAGACTTCAGACCGAAACTCATCAATGGGAAGGGCCCCTTAGATAACTTCATCAGAAGTGAAATCAGAAGCAGCCTCAGCCAGAACATGGTCATCATTGATTTGACAGAGGACTCAAATGACCAGCCAGAGAGTATTATGGACCATGATCCACTAAATCCCAAAGCCTCCCTACCTGAGGAGGGTGTCAGTGGGCTCAAAGAGGAGGCACGAGATGTGGAGGGACCCTTGAACGCCATTCACAATGACAAGTTGGTGCTTCCTGAAGAGACCCTTTCAGATATTGCTTGCAAAGCAGAGGAGGAATATGTGGGCTCAGGTGACCTTGACAGGAATGGCAGCTCCCAGGACAGCTCAATGCAGAGCTGCCCCAAGCTGCCTATTTGTCCAAGTATGTGCCCCGAAAAGGAGCAGGGTGGTTGGAGTGAAGCCAGGTCCCTCCTGTTTAAAGGGAAAGTCCCTGTGGTGATCTTGCAGGACATCCTGGCTATAAAGCCTCCCTGCACCAAGTCTCCTCCCATGGCGCCTCTGGACAAGAGCGGGACGTCAGAGAGCGAGTTGTTGGAATCATGCCCCGAAGAAGACTCTGTCCTTAGCCATTCATCCCTGAGCTCCTCTCCTATCACTTCACCTGAGGGGCCGACTGCTCCGGAAAAGCAGCAGGGGGGCATCAGGCCCTCCCCTGCCTCCACACCTGTCCGAAGGATAACCAAGAAATGCATCAAAGGTTCAACAGAGAAGAGCAAACTGAAACTGCAAAGAGATAAAGAGCAGCTGAGGGAGGAGAAGGAGAAACTGAAGGAGGAGGCTCGGCGTGCCAAAGAGGAGGCCCGGAAGAAGAAGGAGGAGGAGAAGGAGCTGAAGGAGAAGGAAAGGCGCAAGAAGCGGGAGAAGGATGAGAAGGAGAAGGCGGAAAAGCAGCGGCTCAAGGAAGAGCGGCGCAAGGAGAGGCAGGAAGCCCTGGAGGCTAAAATGGAGGAGAAAAGGAAAAAGGAGGAGGAGAAACGGTTACGGGAGGAGGAAAAGCGCATTAAGGCAGAGAAGGCGGAGATCACCAGGTTCTTCCAGAAACCAAAGACCCCACAGGCCCCCAAGACCCTGGCTGGCTCCTGTGGGAAGTTTGCCCCCTTTGAGATTAAAGAGCACATGGTCCTGGCCCCTCGGTGTCGGGCCACCTTGGACCAGGACCTCTGTGATCGGTTAGACCAGCTCCTCCAGGAACAGAGCGGAGACTTCTCCTTCCTGAGGGACCTCAAAGGCCGGCGGCCGCTCAGGTCTGGGCCCACTGGGATCTGCAGCCGGGACACAGACACTGTCAACAGGGATGTGGTGATTGTGGAGAACAGCAAGGGTGACGCCATGCCCGAGAGGAGGAAGTTCGGCCGAATGAAGCTCCTGCAGTTCTCTGAGAATCACCGGCCAGCGTACTGGGGCACGTGGAATAAGAGGACGGCAGCTATCAGCCCGCGGGACCCCTGGGCCCAGGACAAGAAACTCCTCGACTATGAGGTGGACAGCGACGAAGAGTGGGAAGAGGAGGAGCCAGGGGAGTCACTGTCCCACAGCGAAGGGGATGATGATGATGAAGTGGGGGAGGATGAAGATGAGGATGATGGCTTTTTTGTGCCCCATGGGTACCTGTCTGAGGATGAAGGCGTGACTGAGGAGTGCGGCGACCCGGAGAAGCACAAGGTGCGCCAGAAGCTCAAGGCCAAGGAGTGGGACGAGTTCATGGCCAAGGGGAAGCGGGTCCGAGTGCTCCAGCCCGTGCAGATCGGCTGTGTGTGGGCTGACGACACGGGCTGCTCAACCGCTGACCTCAAGGTGCTACAGCAGTTCACAGCCTGGCGACTGGAGTCAGCACCCTCTGAAGACAAGCTGGTGCCCAAGGCCACCAAGCGGGAAAAACGAGACCAGCAGATCCTGGCCCAGCTACTGCCGCTGCTGCATGGCAACGTGAACGGGAGCAAGGCGATCATCCGCGAGTTCCAGGAGCACTGCCGCCGGGGCCTGCTCAGCGTTGGGGGAGCCAGCAGCCCCCCAAGCCCCACCACCCCACGCCCGCACACGCCCACTGAGGACACCGCCGTGCCCTCCAAGGCCAGGCTCAAGCGCATCATCTCTGAGAACTCGGTGTACGAGAAGCGGCCGGACTTCAGGATGTGCTGGTACGTCCACCCACAGGTGCTGCACAGCTTCAACCAAGAGCACCTGCCTGTGCCGTGCCAGTGGAGCTACGTCACCATGGTGCCCTCGGCCCCCAGAGAGGACAGTGGCAGTGTCCCTGCCACATTGCCGGGCCAGGGGACACCCGTGTCCGTGAAGAGGAAGTCAGCGGGCAGCATGTGCATCACGCAGTTCATGAAGAAGCGGAGGCATGACGGGCAGATTGGAGTCGGTGACATGGATGGCTTCCAGGGGGACACGGAGGAGGAGGAGGAAGAGGATGGCGACTGTATGATCATGGAGATCCCGGAGGCCCAGGACCCGTGTGGAACCACATCAGGAGCCGAAGGTGCCGTGGGGATGGACACCAGCGAAGGGCCGCTGCCCACGAGCCCGCTGGGCGCCTCCTGA

Related Sequences

XP_004865802.1 Protein

Chaf1a PREDICTED: chromatin assembly factor 1 subunit A isoform X2 [Heterocephalus glaber]

Length: 945 aa      View alignments
>XP_004865802.1
MLEEPECAAPGARGAAAAMDCKDRPTFPAKKLIQARLPFKRLNVAHKEKAEDESGDTSSQNILVEEKVTDIEASLGILENDCHVDSDLDFRPKLINGKGPLDNFIRSEIRSSLSQNMVIIDLTEDSNDQPESIMDHDPLNPKASLPEEGVSGLKEEARDVEGPLNAIHNDKLVLPEETLSDIACKAEEEYVGSGDLDRNGSSQDSSMQSCPKLPICPSMCPEKEQGGWSEARSLLFKGKVPVVILQDILAIKPPCTKSPPMAPLDKSGTSESELLESCPEEDSVLSHSSLSSSPITSPEGPTAPEKQQGGIRPSPASTPVRRITKKCIKGSTEKSKLKLQRDKEQLREEKEKLKEEARRAKEEARKKKEEEKELKEKERRKKREKDEKEKAEKQRLKEERRKERQEALEAKMEEKRKKEEEKRLREEEKRIKAEKAEITRFFQKPKTPQAPKTLAGSCGKFAPFEIKEHMVLAPRCRATLDQDLCDRLDQLLQEQSGDFSFLRDLKGRRPLRSGPTGICSRDTDTVNRDVVIVENSKGDAMPERRKFGRMKLLQFSENHRPAYWGTWNKRTAAISPRDPWAQDKKLLDYEVDSDEEWEEEEPGESLSHSEGDDDDEVGEDEDEDDGFFVPHGYLSEDEGVTEECGDPEKHKVRQKLKAKEWDEFMAKGKRVRVLQPVQIGCVWADDTGCSTADLKVLQQFTAWRLESAPSEDKLVPKATKREKRDQQILAQLLPLLHGNVNGSKAIIREFQEHCRRGLLSVGGASSPPSPTTPRPHTPTEDTAVPSKARLKRIISENSVYEKRPDFRMCWYVHPQVLHSFNQEHLPVPCQWSYVTMVPSAPREDSGSVPATLPGQGTPVSVKRKSAGSMCITQFMKKRRHDGQIGVGDMDGFQGDTEEEEEEDGDCMIMEIPEAQDPCGTTSGAEGAVGMDTSEGPLPTSPLGAS