Sequence details NCBI ID: XM_004865652.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vav1
Gene Name vav 1 guanine nucleotide exchange factor, transcript variant X5
Entrez Gene ID 101700388

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VAV1 ENSCPOG00000025097 (Guinea pig)

Gene Details

vav 1 guanine nucleotide exchange factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020767, Guinea pig)

Protein Percentage 95.97%
CDS Percentage 92.81%
Ka/Ks Ratio 0.02511 (Ka = 0.0167, Ks = 0.6633)

VAV1 ENSG00000141968 (Human)

Gene Details

vav 1 guanine nucleotide exchange factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000472929, Human)

Protein Percentage 93.42%
CDS Percentage 88.5%
Ka/Ks Ratio 0.03856 (Ka = 0.0297, Ks = 0.7693)

Vav1 ENSMUSG00000034116 (Mouse)

Gene Details

vav 1 oncogene

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005889, Mouse)

Protein Percentage 93.67%
CDS Percentage 84.82%
Ka/Ks Ratio 0.02499 (Ka = 0.0325, Ks = 1.301)

Vav1 ENSRNOG00000050430 (Rat)

Gene Details

proto-oncogene vav

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064264, Rat)

Protein Percentage 89.43%
CDS Percentage 82.79%
Ka/Ks Ratio 0.04355 (Ka = 0.0596, Ks = 1.3681)

Genome Location

Sequence Coding sequence

Length: 2421 bp    Location: 3838706..3896696   Strand: +
Raw sequence   
>XM_004865652.1
ATGGAGCTGTGGCGACAGTGTACCCACTGGCTCATCCAGTGCCGGGTGCTGCCGCCCAGCCACCGCGTCACCTGGGAGGGCGCTCAGGTCTGCGAGCTGGCGCAGGCCCTCAGGGATGGCGTCCTCCTGTGTCAGCTGCTCAACAACCTCCTGCCCCATGCCGTCAACCTGCGTGAGGTCAACCTGCGTCCACAGATGTCCCAGTTTCTGTGCCTTAAGAACATCCGAACCTTCCTGTCCACTTGCTGTGAGAAGTTTGGCCTCAAGCGCAGTGAGCTCTTCGAGGCTTTTGACCTCTTCGATGTGCAAGATTTTGGAAAGGTCATCTACACGCTGTCCGCTCTGTCCTGGACCCCGATCGCCCAGAACAAGGGGATCATGCCCTTCCCCACGGATGAGGACGGCGTGGGTGATGACGACATCTACAGCGGCCTGTCGGATCAGATCGACGACACCGTGGAGGAGGACGAGGACCTGTACGACTGCGTGGAGAACGAGGAGGCCGAGGGCGACGAGATCTATGAGGACCTCATGCGCACAGAACCGGTGCCCATGCCGCCCAAGATGACGGAGTACGAGAAGCGCGGCTGCTGCTTGCGCGAGATCCAGCAGACCGAGGACAAGTACACGGACACGCTGGGCTCCATCCAGCAGCACTTTATGAAGCCCCTACAGCGGTTTCTCAAGCCCCAGGACATGGAGATAATCTTCATCAACATGGAGGACCTGCTCCGCGTTCACACCCACTTCCTGAAGGAGATGAAGGAGGCGCTCACAACCCCGGGGGCTCCCACCCTGTACCAGGTCTTCATCAAATACAAGGAGAGGTTCCTTGTCTACGGCCGCTACTGCAGCCAGGTGGAGTCGGCCAGCAAACACCTGGACCAGGTGGCCACGGCCCGAGAGGACGTGCAGATGAAGCTGGAGGAATGTTCTCAGCGAGCCAACAACGGCAGGTTCACCTTGCGGGACCTGCTGATGGTCCCCATGCAGAGAGTGCTCAAATATCACCTCCTTCTCCAGGAGCTGGTGAAGCACACCCAGGACGCCATGGAGAAGGAGAACCTGCGGCTGGCCCTGGACGCCATGAGGGACCTGGCGCAGTGTGTAAACGAGGTCAAGAGGGACAACGAGACGCTGCGGCAGATCACCAACTTCCAGCTGTCCATTGAGAACCTGGACCGATCGCTGGCCAACTACGGCCGGCCCAAGATTGACGGGGAGCTCAAGATCACCTCGGTGGAGAGGCGGTCCAAGATGGACAGGTACGCCTTCCTGCTGGACAAAGCGCTGCTCATCTGCAAGCGGCGGGGCGACTCCTATGACCTCAAGGACTTTGTGAGCCTGCACAACTTCCAGGTTCGCGACGACTCCTCCGGAGAGCGAGACCACAAGAAGTGGAGCCACATGTTTCTCCTGATCGAGGACCAGGGTGCCCAGGGCTACGAGCTGTTCTTCAAGACCCGCGAGCTGAAGAAGAAGTGGATGGAGCAATTCGAGATGGCCCTCTCCAATATCTACCCGGAGAATGCCACTGCCAATGGCCATGACTTCCAGATGTTTTCCTTTGAGGAGACCACGTCCTGCAAAGCTTGCCAGATGCTTCTCAGAGGGACCTTCTACCAGGGCTACCGCTGTCACCGGTGCCGGGCGCCTGCGCACAAGGAGTGTCTGGGGAGGGTGACTCCGTGCGGCCGGCACGGGCCAGATTTTGCAGGGACCATGAAGAAGGACAAGCAGCACCGCAGGGCTCAGGAGAAAAAACGCAACGAGTTGGGTCTGCCTAAGATGGAAGTGTTTCAGGAATACTATGGCCTTCCTCCTCCACCTGGAGCCTTCGGACCTTTCCTACGGCTCAACCTTGGGGACATCGTGGAGCTCACAAAAGCTGAGGCTGAACAGAACTGGTGGGAGGGTAGAAACACGTGTACCAATGAAGTTGGCTGGTTTCCCTGTAACCGGGTAAAGCCCTATGTCCACGGACCTCCTCAGGACCTGTCGGTTCACCTGTGGTTTAACGTCGAGGTCAAGCATATTAAAATCACGACATCAGAAGGACTGTACCGGATCACAGAGAAGAAGGCTTTCCGGGGGCTTTTGGAGCTGGTAGAATTTTACCAGCAGAACTCCCTGAAGGATTGCTTCAAGTCTCTGGACACCACCTTGCAGTTCCCCTACAAGGAGCCCGAGAGAAGAGCCATCAGCAAGCCACCAGCTGGGAGCGCCAAGTACTTTGGCACAGCCAAAGCCCGCTACGACTTCTGTGCCAGGGACCGATCAGAGCTGTCTCTTAAGGAGGGCGACATCATCAAGATCCTCAGCAAAAAGGGGCAACAAGGCTGGTGGCGAGGGGAGATCTATGGCCGGATTGGCTGGTTCCCTTCAAACTACGTGGAAGAAGATTATTCCGAATACTGTTGA

Related Sequences

XP_004865709.1 Protein

Vav1 PREDICTED: proto-oncogene vav isoform X5 [Heterocephalus glaber]

Length: 806 aa      View alignments
>XP_004865709.1
MELWRQCTHWLIQCRVLPPSHRVTWEGAQVCELAQALRDGVLLCQLLNNLLPHAVNLREVNLRPQMSQFLCLKNIRTFLSTCCEKFGLKRSELFEAFDLFDVQDFGKVIYTLSALSWTPIAQNKGIMPFPTDEDGVGDDDIYSGLSDQIDDTVEEDEDLYDCVENEEAEGDEIYEDLMRTEPVPMPPKMTEYEKRGCCLREIQQTEDKYTDTLGSIQQHFMKPLQRFLKPQDMEIIFINMEDLLRVHTHFLKEMKEALTTPGAPTLYQVFIKYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKYHLLLQELVKHTQDAMEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDRSLANYGRPKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGDSYDLKDFVSLHNFQVRDDSSGERDHKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMALSNIYPENATANGHDFQMFSFEETTSCKACQMLLRGTFYQGYRCHRCRAPAHKECLGRVTPCGRHGPDFAGTMKKDKQHRRAQEKKRNELGLPKMEVFQEYYGLPPPPGAFGPFLRLNLGDIVELTKAEAEQNWWEGRNTCTNEVGWFPCNRVKPYVHGPPQDLSVHLWFNVEVKHIKITTSEGLYRITEKKAFRGLLELVEFYQQNSLKDCFKSLDTTLQFPYKEPERRAISKPPAGSAKYFGTAKARYDFCARDRSELSLKEGDIIKILSKKGQQGWWRGEIYGRIGWFPSNYVEEDYSEYC