Sequence details NCBI ID: XM_004865615.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Clpp
Gene Name ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)
Entrez Gene ID 101720532

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CLPP ENSCPOG00000013954 (Guinea pig)

Gene Details

caseinolytic mitochondrial matrix peptidase proteolytic subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012572, Guinea pig)

Protein Percentage 90.81%
CDS Percentage 90.69%
Ka/Ks Ratio 0.08959 (Ka = 0.0427, Ks = 0.4765)

CLPP ENSG00000125656 (Human)

Gene Details

caseinolytic mitochondrial matrix peptidase proteolytic subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000245816, Human)

Protein Percentage 88.97%
CDS Percentage 88.48%
Ka/Ks Ratio 0.09377 (Ka = 0.0553, Ks = 0.5898)

Clpp ENSMUSG00000002660 (Mouse)

Gene Details

ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002735, Mouse)

Protein Percentage 88.6%
CDS Percentage 83.46%
Ka/Ks Ratio 0.06323 (Ka = 0.0651, Ks = 1.0295)

Clpp ENSRNOG00000047052 (Rat)

Gene Details

ATP-dependent Clp protease proteolytic subunit

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066481, Rat)

Protein Percentage 87.13%
CDS Percentage 83.33%
Ka/Ks Ratio 0.07235 (Ka = 0.0703, Ks = 0.9718)

Genome Location

Sequence Coding sequence

Length: 819 bp    Location: 3499154..3505769   Strand: +
Raw sequence   
>XM_004865615.1
ATGTGGCCCCGAATGTTAGTAGGGGAGGTCTGGGAGGCGGCAGGCAAGTGCTCGGTGCTGGGGCCTCGCCTCGCCGCTCGCGTCGCGCCGCAGCGGACACTCAGGAGCGGCCTGACCCTGCGGCGGAGCCTGCACGCGACGGCGGTCCGGGCCCTCCCGCTCATTCCCATCGTGGTAGAGCAGACGGGTCGCGGCGAACGCGCCTATGACATCTATTCGCGGCTGCTGCGGGAGCGCATCGTGTGCGTCATGGGCCCGATTGATGACACCGTTGCCAGCCTGGTCATCGCACAACTGCTGTTCCTGCAGTCTGAGAGCAACAAGAAACCCATCCACATGTACATCAACAGCCCTGGTGGTGTGGTGACTGCCGGCCTGGCCATCTATGACACAATGCAGTACATCCTGAACCCCATCTGCACGTGGTGTGTGGGTCAGGCCGCCAGCATGGGGTCCTTGCTTCTCGCCGCCGGCAGCCCTGGCATGCGCCACTCACTCCCCAACTCCCGAATCATGATTCACCAGCCCTCTGGGGGCGCCCGGGGCCAAGCCACAGACATCGCCATCCAGGCAGAGGAGATCATGAAGCTGAAAAAGCAGCTGTACAACATCTACGCCAAGCACACCAAGCAGAGCCTGCAGGTGATCGAGTCAGCCATGGAGAGGGACCGCTACATGAGCCCCATGGAGGCCCAGGAGTTTGGCATCCTGGACAAGGTCCTGGTCCACCCGCCCCAGGATGGCGAGGATGAGCCGGAGCTGGTACAGAAGGAACCCACGGTGGCACCAGCAGACCCTCCTGCCCCGACCAGTACCTGA

Related Sequences

XP_004865672.1 Protein

Clpp PREDICTED: putative ATP-dependent Clp protease proteolytic subunit, mitochondrial [Heterocephalus glaber]

Length: 272 aa      View alignments
>XP_004865672.1
MWPRMLVGEVWEAAGKCSVLGPRLAARVAPQRTLRSGLTLRRSLHATAVRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDTVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDEPELVQKEPTVAPADPPAPTST