Details from NCBI annotation

Gene Symbol Cnn1
Gene Name calponin 1, basic, smooth muscle, transcript variant X2
Entrez Gene ID 101716932

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CNN1 ENSCPOG00000009855 (Guinea pig)

Gene Details

calponin 1, basic, smooth muscle

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008842, Guinea pig)

Protein Percentage 87.54%
CDS Percentage 87.43%
Ka/Ks Ratio 0.10748 (Ka = 0.0753, Ks = 0.7008)

CNN1 ENSG00000130176 (Human)

Gene Details

calponin 1, basic, smooth muscle

External Links

Gene Match (Ensembl Protein ID: ENSP00000252456, Human)

Protein Percentage 97.98%
CDS Percentage 92.59%
Ka/Ks Ratio 0.01186 (Ka = 0.0081, Ks = 0.6847)

Cnn1 ENSMUSG00000001349 (Mouse)

Gene Details

calponin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001384, Mouse)

Protein Percentage 97.98%
CDS Percentage 87.09%
Ka/Ks Ratio 0.00627 (Ka = 0.0099, Ks = 1.5794)

Cnn1 ENSRNOG00000027736 (Rat)

Gene Details

calponin 1, basic, smooth muscle (Cnn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029782, Rat)

Protein Percentage 97.98%
CDS Percentage 86.98%
Ka/Ks Ratio 0.00645 (Ka = 0.01, Ks = 1.5531)

Genome Location

Sequence Coding sequence

Length: 894 bp    Location: 3283357..3289777   Strand: +
>XM_004865605.1
ATGTCCTCTGCCCACTTCAACCGGGGCCCCGCCTACGGGCTGTCAGCCGAGGTCAAGAACAAGCTGGCCCAGAAGTATGATCACCAGCGGGAGCAGGAGCTGCGAGAGTGGATCGAGGGGGTGACCGGGCGCCGCATCGGCAACAACTTCATGGACGGCCTCAAGGACGGCATCATCCTGTGCGAATTCATCAATAAGCTCCAGCCAGGCTCAGTGAAGAAGGTGAATGAGTCGACCCAAAATTGGCACCAGCTGGAGAACATCGGCAATTTCATCAAGGCCATTACTAAGTATGGGGTGAAGCCTCACGACATCTTCGAGGCCAACGACCTGTTTGAGAACACCAATCATACCCAGGTGCAGTCCACGCTCCTGGCCCTAGCCAGCATGGCCAAGACGAAAGGCAACAAGGTGAATGTTGGGGTGAAGTATGCAGAGAAGCAGGAGCGGAAATTTGAGCCAGAGAAGCTGAGAGAAGGGCGGAACATCATCGGGCTACAGATGGGCACCAACAAGTTTGCCAGCCAGCAGGGCATGACAGCCTATGGCACCCGGCGCCACCTCTATGACCCCAAGCTGGGCACAGACCAGCCGCTGGACCAGGCCACCATCAGCCTGCAGATGGGCACCAACAAGGGGGCCAGCCAGGCTGGCATGACGGCACCTGGGACCAAGCGGCAGATCTTCGAGCCGGGCCTGGGCATGGAGCACTGCGACATGGTCAATGTCAGCCTGCAGATGGGCAGCAACAAGGGTGCCTCGCAGCGGGGCATGACGGTGTACGGGCTGCCACGCCAGGTCTACGACCCCAAGTACTGCCTGACGCCCGAGTACCCAGAGCTGGGCGAGCCGGTGCACAACCACCACCCGCACAACTACTACAACTCTGCCTAG

Related Sequences

XP_004865662.1 Protein

Cnn1 PREDICTED: calponin-1 isoform X2 [Heterocephalus glaber]

Length: 297 aa      View alignments
>XP_004865662.1
MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGRRIGNNFMDGLKDGIILCEFINKLQPGSVKKVNESTQNWHQLENIGNFIKAITKYGVKPHDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPEKLREGRNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAGMTAPGTKRQIFEPGLGMEHCDMVNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTPEYPELGEPVHNHHPHNYYNSA