Details from NCBI annotation

Gene Symbol Prkcsh
Gene Name protein kinase C substrate 80K-H, transcript variant X4
Entrez Gene ID 101712131

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRKCSH ENSCPOG00000020528 (Guinea pig)

Gene Details

protein kinase C substrate 80K-H

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015568, Guinea pig)

Protein Percentage 88.69%
CDS Percentage 89.34%
Ka/Ks Ratio 0.09279 (Ka = 0.053, Ks = 0.5714)

PRKCSH ENSG00000130175 (Human)

Gene Details

protein kinase C substrate 80K-H

External Links

Gene Match (Ensembl Protein ID: ENSP00000252455, Human)

Protein Percentage 87.64%
CDS Percentage 85.3%
Ka/Ks Ratio 0.07374 (Ka = 0.0703, Ks = 0.9538)

Prkcsh ENSMUSG00000003402 (Mouse)

Gene Details

protein kinase C substrate 80K-H

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000003493, Mouse)

Protein Percentage 84.84%
CDS Percentage 81.38%
Ka/Ks Ratio 0.04628 (Ka = 0.0806, Ks = 1.7416)

Prkcsh ENSRNOG00000013360 (Rat)

Gene Details

protein kinase C substrate 80K-H (Prkcsh), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018009, Rat)

Protein Percentage 82.76%
CDS Percentage 79.44%
Ka/Ks Ratio 0.0546 (Ka = 0.0996, Ks = 1.8249)

Genome Location

Sequence Coding sequence

Length: 1581 bp    Location: 3219219..3227369   Strand: +
>XM_004865589.1
ATGTTGCTGTTGATGCTGCTGATGCTGCCCCTCTGCTGGTCCGTGGAGGTCAAGAGGCCCCGGGGCGTCTCCCTCACTAACCATCACTTCTATGACAAATCCAAGCCTTTCACCTGCCTGGACGGCTCGGCCACAATCCCTTTTGATCAAGTCAACGATGACTACTGTGATTGCAAGGATGGTTCAGATGAGCCGGGCACAGCCGCCTGTCCTAATGGCAACTTCCACTGCACCAACACGGGCTACAAGCCCCTGTATATCCCCTCCAGCCGCGTCAATGATGGCATCTGTGACTGCTGCGATGGGACCGATGAGTACAACAGTGGCACTGTCTGCGAGAACACCTGCAAAGAGAAGGGCCTCAAAGAGAGAGAGTCCCTGCAGCAGATGGCAGAGGTCACCCGCGAGGGGTTCCGCCTGAAGAAGATCCTCGTTGAGGACTGGAAGAAGGCCCGGGAGGAGAAGCAGAAAAAGCTCACCGAGCTACAGGCTGGAAAGAAGTCTCTGGAAGACCAGGTGGAGGCCCTGCGGGCTTTGAAGGAAGAGGCTGAGAAGCCGGAGAAGGAGGCCAAGGAGCAGCACCAGAGGCTGTGGGAAGAGCAGCAGGCCGCTGTCAAGGCCCAGCGCGAGCAGGAGCAGGCGGCTGATGCCTTCCGGGAGCTGGATGACAACATGGACGGGGTGGTCTCGGTGGCCGAGCTGCAGACCCATCCAGAGCTGGACACAGATGGCGATGGGACTGTGTCTGAAGGGGAGGCCCAGGCCCTGCTCGGCGGGGACACACAGACGGATGCCAGCTCCTTCTACGACCGAGTCTGGGCCAGCATCAGGGACAAGTACCGGTCCGAGGCACTCCCTGCCGACCTCCCAGCACCTCTGGCCCCGGAGGTGATGGAGTCCAAGGAGGAGCAGCCCTCGGTGCCGACCCATCCCACGGAGTACGAGGAAGAGGAGGAGGAGGAAACCGAGGAAGAAGAGGAGGATGAAGAGCAGGATTCTGAGGAGGCCCCGTCCCCACTGGAGCCCTCCCAGCCGCCCAGCCCCAGCGAGGAGGACAAGATGCCACCCTATGATGAGCAGACACAGGCCTTCATTGATGCTGCCCAGGAGGCCCGCAGCAAGTTCGAGGAGGCTGAGCGGTCCCTGAAGGACATGGAGGAGTCCATCAGGAACCTGGAGCAGGAGATTTCCTTCGACTTTGGCCCCCAAGGGGAGTTCGCCTACCTGTACAGCCAGTGCTACGAGCTCAGCACCAATGAATACATCTACCGGCTCTGCCCCTTTAAACTCGTCTCCCAGAAACCGAAGCTGGGCGGCTCCCCCACCAACCTCGGCACGTGGGGCTCGTGGGCCGGGCCCGAGCACGACAGATTCAGCGCCATGAAGTACGAGCAGGGGACCGGCTGCTGGCAGGGCCCCAACCGCTCCACCACCGTGCGCCTGCTGTGCGGGAAGGAGACCGCGGTCACCAGCACCACCGAGCCCAGCCGATGCGAGTACCTCATGGAGCTCTCCACGCCGGCCGCCTGCCCGGAGCCGCCCCCTGAGCTCCCGGTGGACAGCGACCACGATGAGCTGTAG

Related Sequences

XP_004865646.1 Protein

Prkcsh PREDICTED: glucosidase 2 subunit beta isoform X4 [Heterocephalus glaber]

Length: 526 aa      View alignments
>XP_004865646.1
MLLLMLLMLPLCWSVEVKRPRGVSLTNHHFYDKSKPFTCLDGSATIPFDQVNDDYCDCKDGSDEPGTAACPNGNFHCTNTGYKPLYIPSSRVNDGICDCCDGTDEYNSGTVCENTCKEKGLKERESLQQMAEVTREGFRLKKILVEDWKKAREEKQKKLTELQAGKKSLEDQVEALRALKEEAEKPEKEAKEQHQRLWEEQQAAVKAQREQEQAADAFRELDDNMDGVVSVAELQTHPELDTDGDGTVSEGEAQALLGGDTQTDASSFYDRVWASIRDKYRSEALPADLPAPLAPEVMESKEEQPSVPTHPTEYEEEEEEETEEEEEDEEQDSEEAPSPLEPSQPPSPSEEDKMPPYDEQTQAFIDAAQEARSKFEEAERSLKDMEESIRNLEQEISFDFGPQGEFAYLYSQCYELSTNEYIYRLCPFKLVSQKPKLGGSPTNLGTWGSWAGPEHDRFSAMKYEQGTGCWQGPNRSTTVRLLCGKETAVTSTTEPSRCEYLMELSTPAACPEPPPELPVDSDHDEL