Sequence details NCBI ID: XM_004865378.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lrrc8e
Gene Name leucine rich repeat containing 8 family, member E
Entrez Gene ID 101709943

Database interlinks

Part of NW_004624828.1 (Scaffold)

For more information consult the page for NW_004624828.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC8E ENSCPOG00000003902 (Guinea pig)

Gene Details

leucine rich repeat containing 8 family, member E

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003521, Guinea pig)

Protein Percentage 95.48%
CDS Percentage 91.35%
Ka/Ks Ratio 0.04422 (Ka = 0.0216, Ks = 0.4878)

LRRC8E ENSG00000171017 (Human)

Gene Details

leucine rich repeat containing 8 family, member E

External Links

Gene Match (Ensembl Protein ID: ENSP00000306524, Human)

Protein Percentage 91.82%
CDS Percentage 87.0%
Ka/Ks Ratio 0.04443 (Ka = 0.0425, Ks = 0.9562)

Lrrc8e ENSMUSG00000046589 (Mouse)

Gene Details

leucine rich repeat containing 8 family, member E

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052055, Mouse)

Protein Percentage 91.82%
CDS Percentage 84.15%
Ka/Ks Ratio 0.03702 (Ka = 0.045, Ks = 1.2156)

Lrrc8e ENSRNOG00000028460 (Rat)

Gene Details

leucine rich repeat containing 8 family, member E (Lrrc8e), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037487, Rat)

Protein Percentage 92.45%
CDS Percentage 83.98%
Ka/Ks Ratio 0.03011 (Ka = 0.0414, Ks = 1.3756)

Genome Location

Sequence Coding sequence

Length: 2388 bp    Location: 860744..868595   Strand: +
Raw sequence   
>XM_004865378.1
ATGATCCCAGTGGCCGAGTTCAAGCAATTCACGGAACAGCAGCCTGCGTTCAAGGTGCTCAAACCCTGGTGGGATGTGCTCGCTGAGTATCTCACGGTGGCTATGCTCATGATCGGAGTCTTTGGCTGCACCCTGCAGGTGACGCAGGACAAGATTATCTGCCTGCCCAGTCATGAACCCCGGGAGAACTTCTCAGAGGCCCCTTGCCAGCAGCTCTTGCCTCAGGGGGTCTCCGAGCACATGGAGGGCCTCCGGGAGCTGAGTGGCCTCAAGAACAACTTGGACCTGCAGCAGTACAGCTTCATTAACCAGCTGTGCTATGAGACAGCCCTGCACTGGTATGCCAAATACTTCCCCTACCTGGTTGTCATCCACACACTCATCTTCATGGTCTGCACCAGCTTCTGGTTCAAGTTCCCCGGCACCAGCTCCAAGATCGAACATTTCATCTCCATCCTGGGCAAGTGTTTCGATTCCCCATGGACCACCCGGGCCTTGTCTCAGGTCTCCGGGGAGAACCAAAAAGGCGCAGCTGCCTCACGGGCCACAGCCATCACAGTGGCTGCAGCAGGGACCGGGTCCGGGAAGGCAGGTGAGGGCGAGAAGGAGAAAGTGCTAGCAGAACCGGAGAAGGTGGTGACCGAGCCTCCAGCTGTCACCCTGCTGGACAAGAAGGAGGGCGAGCAGGCCAAAGCCCTGTTTGAGAAGGTCAAGAAGTTCCGCGTGCATGTGGAAGAGGGGGACATCCTCTACACCATGTACATCCGGCAGACAGTGCTCAAAGTCTGCAAGTTCCTGGCCATCCTGGTCTACAACCTGGTCTACGTGGAGAAGATCAGCTTCCTGGTAGCTTGCAAGGTGGGGACCTCAGAGGTCACCGGATATGCTAGTTTCTGCTGTAACCACACCAAGGCGCACCTCTTCTCCAAGCTGGCCTTCTGCTACATCTCCTTCGTGTGCGTCTATGGGATCACCTGCCTGTACACACTCTACTGGCTCTTCCACCGGCCTCTCAAGGAGTACTCTTTCCGATCCGTGCGAGAGGAGACAGGCATGAATGACATCCCCGACGTCAGGAATGACTTCGCCTTCATGCTGCACCTCATTGACGAGTATGACTCGCTCTACTCCAAGCGCTTCGCTGTCTTCCTCTCCGAGGTCAGTGAAAGCCGCCTGAAGCAGCTCAACCTCAACCATGAGTGGACGCCGGAGAAACTGAGGCAGAAGCTGCAGCGAAACTCAAGGGGCCGGCTGGAGCTGGCTCTCTGCATGCTCCCTGGACTGCCTGACACCATCTTCGAGCTCAGCGAGGTGGAGGCACTCAGGCTGGAGGCCATCTGCGATATCGCCTTCCCGCCGGGGCTGTCACAGCTCACAAACCTTCAGGAGCTCAGCTTGTTGCATTCACCTGCCAGGGTGCCTTTCTCTTCCCAGATCTTCCTTCGGGACCGCCTGAAGGTGATCCGGGTCAAATGTGAGGAGCTCCGAGAGGTGCCCCTCTGGGTGTTCGGGCTTCGTGCCCTGGAGGAGCTGCACCTGGAGGGGCTTTTTCCTCCAGAGCTGGCTCGGGCGGCTTCTCTCGAGAGTCTCCGGGAGCTGAAGCAGCTCAAAGTGTTGTCCTTGCGCAGCAATGCCGGGAAGGTGCCAGCGAGCGTGACTGACGTGGCTGGGCACCTGCAGCGGCTCAGCCTGCACAATGACGGGGCGCGCCTGCTGGCCCTCAACAGCCTCAAGAAACTGGCAGTCCTTCGGGAGCTGGAGCTGGTGGCCTGCGGGCTGGAGCGCATCCCCCATGCCATCTTCAGTCTAGGCGCACTACAGGAACTTGACCTCAAAGACAACCACCTCCGGTCCATTGAAGAGATCCTCAGCTTCCAGCACTGCCGGAAGCTGGTCACGCTCAGGCTGTGGCACAACCAGATCGCCTATGTCCCAGAGCATGTACGGAAGCTCAGGGGCCTTGAGCAGCTCTACCTGAGCCACAACAAGCTGGAGACCCTGCCCAGCCAGCTCGGCCTGTGCTCCAGCCTCCGTCTGCTGGACGTATCCCACAACGGGCTACACTCCCTGCCACCCGAGGTGGGCCTCCTCCAGAACCTGCAGCACCTGGCTCTCTCCTACAATGCTCTCGAAGCCTTGCCAGATGAGTTGTTCTTCTGCCGCAAGCTGCGGACATTGCTTCTGGGCTACAACCACCTGGGCTACCTCTCTCCCCATGTGGCAGCCCTCACAGCCCTTAGTCGCCTGGAGCTCAAGGGCAACCGGTTAGAGGTGCTGCCGGAAGAACTGGGCAACTGCACAGGACTGAAGAAGGCGGGGCTGGTGGTGGAGGACACCCTTTACCAGGGGCTGCCCACTGAGGTTCGAGCAAAGATGGAGGAGGAATGA

Related Sequences

XP_004865435.1 Protein

Lrrc8e PREDICTED: leucine-rich repeat-containing protein 8E [Heterocephalus glaber]

Length: 795 aa      View alignments
>XP_004865435.1
MIPVAEFKQFTEQQPAFKVLKPWWDVLAEYLTVAMLMIGVFGCTLQVTQDKIICLPSHEPRENFSEAPCQQLLPQGVSEHMEGLRELSGLKNNLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLIFMVCTSFWFKFPGTSSKIEHFISILGKCFDSPWTTRALSQVSGENQKGAAASRATAITVAAAGTGSGKAGEGEKEKVLAEPEKVVTEPPAVTLLDKKEGEQAKALFEKVKKFRVHVEEGDILYTMYIRQTVLKVCKFLAILVYNLVYVEKISFLVACKVGTSEVTGYASFCCNHTKAHLFSKLAFCYISFVCVYGITCLYTLYWLFHRPLKEYSFRSVREETGMNDIPDVRNDFAFMLHLIDEYDSLYSKRFAVFLSEVSESRLKQLNLNHEWTPEKLRQKLQRNSRGRLELALCMLPGLPDTIFELSEVEALRLEAICDIAFPPGLSQLTNLQELSLLHSPARVPFSSQIFLRDRLKVIRVKCEELREVPLWVFGLRALEELHLEGLFPPELARAASLESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARLLALNSLKKLAVLRELELVACGLERIPHAIFSLGALQELDLKDNHLRSIEEILSFQHCRKLVTLRLWHNQIAYVPEHVRKLRGLEQLYLSHNKLETLPSQLGLCSSLRLLDVSHNGLHSLPPEVGLLQNLQHLALSYNALEALPDELFFCRKLRTLLLGYNHLGYLSPHVAALTALSRLELKGNRLEVLPEELGNCTGLKKAGLVVEDTLYQGLPTEVRAKMEEE