Details from NCBI annotation

Gene Symbol Cbx1
Gene Name chromobox homolog 1, transcript variant X2
Entrez Gene ID 101706928

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CBX1 ENSCPOG00000008408 (Guinea pig)

Gene Details

chromobox homolog 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007559, Guinea pig)

Protein Percentage 90.27%
CDS Percentage 86.31%
Ka/Ks Ratio 0.06137 (Ka = 0.0648, Ks = 1.0559)

CBX1 ENSG00000108468 (Human)

Gene Details

chromobox homolog 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000377060, Human)

Protein Percentage 99.46%
CDS Percentage 89.73%
Ka/Ks Ratio 0.0027 (Ka = 0.0023, Ks = 0.867)

Cbx1 ENSMUSG00000018666 (Mouse)

Gene Details

chromobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091475, Mouse)

Protein Percentage 99.46%
CDS Percentage 87.39%
Ka/Ks Ratio 0.00177 (Ka = 0.0024, Ks = 1.3452)

Cbx1 ENSRNOG00000008689 (Rat)

Gene Details

Protein Cbx1; RCG35120, isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011665, Rat)

Protein Percentage 98.92%
CDS Percentage 86.13%
Ka/Ks Ratio 0.00317 (Ka = 0.0049, Ks = 1.5396)

Genome Location

Sequence Coding sequence

Length: 558 bp    Location: 4689898..4667765   Strand: -
>XM_004859596.1
ATGGGGAAGAAGCAAAACAAGAAGAAAGTGGAGGAGGTGCTGGAGGAGGAGGAGGAGGAGTACGTGGTGGAGAAAGTGCTGGACCGCCGGGTGGTGAAGGGCAAAGTGGAGTACCTGCTCAAGTGGAAGGGCTTCTCGGATGAGGACAACACATGGGAGCCCGAAGAGAACCTGGACTGCCCCGACCTCATCGCCGAGTTTCTGCAGTCCCAGAAAACAGCACACGAGACAGACAAGTCAGAGGGAGGCAAGCGCAAGGCTGACTCTGATTCCGAAGATAAGGGAGAGGAGAGCAAACCAAAGAAGAAGAAGGAAGAGTCGGAGAAGCCACGAGGCTTTGCCCGGGGTTTGGAGCCTGAGCGAATTATTGGTGCCACGGACTCCAGCGGAGAGCTCATGTTCCTCATGAAATGGAAGAACTCGGACGAGGCTGACCTGGTGCCTGCCAAGGAGGCCAACGTCAGGTGCCCGCAGGTCGTCATCTCCTTCTATGAGGAGCGGCTGACGTGGCACTCCTACCCCTCGGAGGATGACGACAAGAAGGACGACAAGAACTAA

Related Sequences

XP_004859653.1 Protein

Cbx1 PREDICTED: chromobox protein homolog 1 isoform X2 [Heterocephalus glaber]

Length: 185 aa      View alignments
>XP_004859653.1
MGKKQNKKKVEEVLEEEEEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQKTAHETDKSEGGKRKADSDSEDKGEESKPKKKKEESEKPRGFARGLEPERIIGATDSSGELMFLMKWKNSDEADLVPAKEANVRCPQVVISFYEERLTWHSYPSEDDDKKDDKN