Sequence details NCBI ID: XM_004859550.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgap23
Gene Name Rho GTPase activating protein 23, transcript variant X1
Entrez Gene ID 101724497

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGAP23 ENSCPOG00000025821 (Guinea pig)

Gene Details

Rho GTPase activating protein 23

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021054, Guinea pig)

Protein Percentage 88.16%
CDS Percentage 88.13%
Ka/Ks Ratio 0.09223 (Ka = 0.059, Ks = 0.6397)

ARHGAP23 ENSG00000225485 (Human)

Gene Details

Rho GTPase activating protein 23

External Links

Gene Match (Ensembl Protein ID: ENSP00000393539, Human)

Protein Percentage 88.37%
CDS Percentage 87.14%
Ka/Ks Ratio 0.08154 (Ka = 0.0561, Ks = 0.6877)

Arhgap23 ENSMUSG00000049807 (Mouse)

Gene Details

Rho GTPase activating protein 23

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000103227, Mouse)

Protein Percentage 87.22%
CDS Percentage 84.14%
Ka/Ks Ratio 0.07298 (Ka = 0.0651, Ks = 0.8918)

Arhgap23 ENSRNOG00000022771 (Rat)

Gene Details

Protein Arhgap23

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032436, Rat)

Protein Percentage 87.18%
CDS Percentage 84.48%
Ka/Ks Ratio 0.07686 (Ka = 0.0647, Ks = 0.8414)

Genome Location

Sequence Coding sequence

Length: 4341 bp    Location: 4146533..4092815   Strand: -
Raw sequence   
>XM_004859550.1
ATGAATGGAGTCGCCTTCTGCCTGGTCGGGATCCCGCCGCGCCCGGAGCCCCGGCCCCCCCAGCTGCCCCTGGGCCCAAGAGATGGGTGCTCTCCCGGGCGCCCGCTGCCCTGGCAGGGGCCGAGGACGCTGCTGCTGCACAAGAGTCTCCAGGACGGCTTCGGCTTCACCCTGCGGCACTTCATCGTGTACCCACCCGAGTCTGCCGTGCACTGCAGCCTGAAGGAGGAAGAGAATGGGGGCCGAGGGGGCCCCTCCCCGCGGCACCGCCTGGAGCCCATGGACACCATCTTTGTGAAGAACATCAAGGACGATGGCCCCGCACACAGGGCGGGGCTCCGCACAGGAGACCGGCTGGTGAAGGTGAACGGGGAAAGCGTCATCGGGAAGACCTACTCCCAGGTCATAGCGCTGATCCAGAACAGCGATGACAACCTGGAGCTGACCATCATGCCCAAGGACGAGGACGTCCTCCAGCTGGCCTATTCCCAGGATGCCTACCTGAAGGGGAACGAGCCCTATTCTGGAGAGGCCCGCAGCATCCCCGAGCCACCCCCTCTCTGCTACCCCCGGAAGACCTACGCCCCACCAGCCCGGCTGTCTGCCTGGGCCACTATGGTGCCTGAGCCCACCTCGGCCCTGCTCAGTGACCCCCGGAGCCCCGCCGCGTGGAGTGACCCAGGGCCCTGCGTTCCGCCCGCCACCCTCACCCACCCAGAGTCCTCTTCCTTGGGGATGAGCCAGCCCCGCCCCAGCCCTGGTGCCTTCCCCCACCTACCTGAGGAGCCCCGGACGTCCCGTGCCTTCCCAGAGCCCGGCAGCCGGGCGCTCCCCAGCAGACTGGAGTGCCAGCAGGCCCTGTCGAACTGGCTGTCGAAGCAGGTACCCCGCAGGGCGGGGGAGAGTCGGTGCCCGGCCATGCCACCCCGGGCCCGCAGTGCCTCGCAGGACCGGCTGGAGGAGGTGACCGCCCACCGTGCGTGGCCCTGCTCCACGTCCCAGGATGCTTTGAGCCAGCTGGGCCGGGAGAGCTGGCACCGGGCACGCTCAGAGGACTATCTGGGCCGGGCCACCCGCTCCGCCGAGGCCCTGGGACCAGGCCTGCTGGGGTCACCCCGCTTCGAGCGCTGCAGCTGGGCCTCCCAGCATCCTGCTGCCCACACAACTGCCTGCCCTGCTCGGGACCTGCCAGGGCCTCAGGCCCTTCCTGCACCCGGCCTGCAGGGCCTGGACGACATTGGGTACATGGGCTACCGAAGCTACAGCCCGTCCTTCCAGCGCCGGACTGGCCTTCTGCACGCGCTCTCCTTCCGGGACTCGCCCTTCGGGGGGCTGCCCAGCTTCAGCCTGGCCCAGACTGCCACACCATTCCCACCCGAGGCCTCTGAACCGCCCAGGGTGACAAGGCCCGAGCCCAACGCCCTGGCCCTGGAGCCCCCGGCCGAAGACCCCCGCGAGGAGGTCATCCTGAGGCAGAAGCCGCCCACAGGCCGAAAGGGCCCCCTGGGCCCCGCCCGACAGATGAACCTTGGACTTGGGGACGAAACCCCGGAGCCAGAGGCAGGCGGGCGAGGGGAGCGCTTGGGCAGGAGGGTCACCCCCTTGGCCACCACCGAGGACTCACTGGCTTCCATCCCCTTCATCGATGAGCCCACCAGCCCCAGCATCGATCTCCAGGCCAAGCACGTCCCTGCGTCGGCCGTGGTCTCCAGTGCCATGAACTCAGCCCCGGTCTTGGGCACCAGCCCATCCTCACCGACCTTCACCTTTGCCCTCAGCCGCCACTACGCGAAAGACTGCAGCAGCATCAAGGCCGGGCGCCGCTCCTCCTACCTGCTGGCCATCACCACCGAGCGCTCCAAGTCCTGTGACGACGGCCTCAACACCTTCCGGGACGAGGGCCGGGCGCTGCGGCGCCTGCCGAGCCGCGTGCCCAGCCTGCGGGTGCTCCGGAGCTTCTTCACGGACGGGTCCCTGGATAGCTGGGGAACGTCCGAAGATGCTGATGCCCCTTCCAAGCGGCACTCCACCTCTGACCTCTCAGACTCAGCCTTCAGTGATGTCAGGAGAGAGGGCTGGCTATCGTACAAGCAGGTCCTCACCAGGAAGGGGAAGAAGGCGGGCAGCGGGCTGCGCCAGTGGAAGCGGGTGTACGCCACGCTGCGGGCGCGCTCGCTCTGCCTGAGCAAGGAGCGGCGGGAGCCCGGGCCGGCGGCGGGGGCTGCGGCGGCCGGCGCAGGTGAGGAGGAGGCGGCGCCCGTCTGCATCGGCTCCTGCCTGGTGGACATCTCCTACAGCGACACCAAGAGGAGGCACGTGTTCCGGCTGACCACCGCTGACTTCTGTGAATATCTCTTTCAGGCTGAGGACCGCGATGACATGCTGGGCTGGATCAGAGCGATCCGGGAGAACAGCAGGGCCGAGGGGGAGGACCCCGGCTGGGCCAACCAAGCTCTGATCAGCAAGAAGCTTAACGATTACCGCAAAGTGAGCCACGGCTCTGGGCCCAAAGCCGATGCCTCCCCCAAAGTCTCTCGCGGGCTGGGGGGGCTCAAGTCCGAGTTCCTCAAGCAGAGTGCGGTGCGCGGCCTCAGGACCCAGGAGCAGTCCCCGGGGAGCAAGGATGACACTACGGCTGCCCCCAAAACTCCCTGGGGCATCAACATCATCAAGAAGAACAAGAAGGCCACCCCGAGGGCCTTCGGGGTCCGGCTGGAGGAGTGCCAGCCGGCCCCAGAGAACCAGCGCGTGCCTCTCATCGTGGCTGCCTGCTGTCGCATCGTGGAGGCCCGGGGGCTGGAGTCCACCGGCATCTACCGAGTGCCCGGCAACAACGCCGTGGTGTCCAGCCTGCAGGAGCAGCTCAACCGCGGGCCCGGCGACATCAACCTGCAAGACGAGCGCTGGCAGGACCTCAATGTCATCAGCAGCCTGCTCAAGTCCTTCTTCCGGAAGCTGCCCGAGCCTCTGTTCACCAATGACAAATACAACGACTTCATCGAGGCCAATCGCATAGAGGATGCCAGGGAGCGGATGAAGACACTTCGGAAGCTGATCCGGGACCTCCCAGGACACTACTACGAGACACTCAAGTTCCTCGTGGGCCACCTCAAGACCATCGCGGACCACTCAGAGCAGAACAAGATGGAGCCCCGGAACCTGGCCCTGGTGTTCGGGCCGACATTGGTGAGGACATCTGAGGACAACATGACGGACATGGTGACCCACATGCCCGACCGATACAAGATCGTGGAGACACTGATCCAGCACTCGGACTGGTTCTTCAGCGATGACAAGGACAAGGGCGAGAGAACCCCCGTGGACGACAAGGAGCCGCAGTCGGTGCCCAACATCGAGTACCTGCTGCCCAACATCGGCAGGACGGTGCCCCCCGGCGACCCAGGCCCAGATTTCGCCACCTGCAGTTCAGCCAAGTCCAAGGCTTCGTGGGCGCCCAGGAAGGAGCCGTACGCGCGGGAGATGCTGGCGATCTCCTTCATCTCGGCAGTCAACCGCAAGCGCAAGAAGCGGCGGGAGGCGCGCGGCCTGGGGAGCAGCACGGACGACGACTCGGAGCACGAGGCGGCCCGGGGGGGGGCGCCCGGGGCCCCCGAGCCACCGCCGCGTGCCCCGAGCCCCACGCCCCCCGCGGCCCCGGCGCCGGACGCCCGCTCCGTGGCGTCGGGCTACTCCACGCTGTCGTCGGCCGGGCGCGGCGCGCGGCGGGCGGGCGCGGGCGACGAGGCGGACGACGAGCGCAGCGAGCCCAGCCTGGCGGGCACCGACACGGAAGGCGGCGCGGGCGCGCGGGGGCGCCGGCCCTCGTTCAGCTCGCACCGCCTCATGCCCTGCGACACCCTGGCGCGCCGCCGCCTGGCCCGGGGGCGCGCTGACCCCGAGGGCCCCCGCGCGCCCGCGCCAGGCTCCGCCTCGTCCAGCAGCCAGGAGTCGCTGCGCCCCCCAGGGGCCGCGGAGGCGCTGGGCGCGCGGCCCTCGCGCCTGGAGACGCTGCGCCTGCGGCTGCGTGGCACAGCCGACGACATGGCCGTGCGCTTGCGCCGTCCGCTGTCCCCGGAGACGCGGCGACGCCGCAGCAGCTGGCGGCGCCACACGGTGGTGGTGCAGAGCCCGCTCACCGACCTCAACTTCAACGAGTGGAAGGAGCGGGGCGCGCAGGGGGCCGCGGGCGCGCGCGCCCACAGTGACAACAAGGACTCGGGGCTCAGCAGCTTGGAGTCCACCAAGGCGCGCGCCTCGTCCTCCGCCGCCTCGCTGCCCCCCGGGGACTTGGGGACCCTGCAGGCTGTGGCCACCGCCTCCCGCCTCCACCCGTGTCTCTGA

Related Sequences

XP_004859607.1 Protein

Arhgap23 PREDICTED: rho GTPase-activating protein 23 isoform X1 [Heterocephalus glaber]

Length: 1446 aa      View alignments
>XP_004859607.1
MNGVAFCLVGIPPRPEPRPPQLPLGPRDGCSPGRPLPWQGPRTLLLHKSLQDGFGFTLRHFIVYPPESAVHCSLKEEENGGRGGPSPRHRLEPMDTIFVKNIKDDGPAHRAGLRTGDRLVKVNGESVIGKTYSQVIALIQNSDDNLELTIMPKDEDVLQLAYSQDAYLKGNEPYSGEARSIPEPPPLCYPRKTYAPPARLSAWATMVPEPTSALLSDPRSPAAWSDPGPCVPPATLTHPESSSLGMSQPRPSPGAFPHLPEEPRTSRAFPEPGSRALPSRLECQQALSNWLSKQVPRRAGESRCPAMPPRARSASQDRLEEVTAHRAWPCSTSQDALSQLGRESWHRARSEDYLGRATRSAEALGPGLLGSPRFERCSWASQHPAAHTTACPARDLPGPQALPAPGLQGLDDIGYMGYRSYSPSFQRRTGLLHALSFRDSPFGGLPSFSLAQTATPFPPEASEPPRVTRPEPNALALEPPAEDPREEVILRQKPPTGRKGPLGPARQMNLGLGDETPEPEAGGRGERLGRRVTPLATTEDSLASIPFIDEPTSPSIDLQAKHVPASAVVSSAMNSAPVLGTSPSSPTFTFALSRHYAKDCSSIKAGRRSSYLLAITTERSKSCDDGLNTFRDEGRALRRLPSRVPSLRVLRSFFTDGSLDSWGTSEDADAPSKRHSTSDLSDSAFSDVRREGWLSYKQVLTRKGKKAGSGLRQWKRVYATLRARSLCLSKERREPGPAAGAAAAGAGEEEAAPVCIGSCLVDISYSDTKRRHVFRLTTADFCEYLFQAEDRDDMLGWIRAIRENSRAEGEDPGWANQALISKKLNDYRKVSHGSGPKADASPKVSRGLGGLKSEFLKQSAVRGLRTQEQSPGSKDDTTAAPKTPWGINIIKKNKKATPRAFGVRLEECQPAPENQRVPLIVAACCRIVEARGLESTGIYRVPGNNAVVSSLQEQLNRGPGDINLQDERWQDLNVISSLLKSFFRKLPEPLFTNDKYNDFIEANRIEDARERMKTLRKLIRDLPGHYYETLKFLVGHLKTIADHSEQNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHSDWFFSDDKDKGERTPVDDKEPQSVPNIEYLLPNIGRTVPPGDPGPDFATCSSAKSKASWAPRKEPYAREMLAISFISAVNRKRKKRREARGLGSSTDDDSEHEAARGGAPGAPEPPPRAPSPTPPAAPAPDARSVASGYSTLSSAGRGARRAGAGDEADDERSEPSLAGTDTEGGAGARGRRPSFSSHRLMPCDTLARRRLARGRADPEGPRAPAPGSASSSSQESLRPPGAAEALGARPSRLETLRLRLRGTADDMAVRLRRPLSPETRRRRSSWRRHTVVVQSPLTDLNFNEWKERGAQGAAGARAHSDNKDSGLSSLESTKARASSSAASLPPGDLGTLQAVATASRLHPCL