Details from NCBI annotation

Gene Symbol Cntnap1
Gene Name contactin associated protein 1, transcript variant X2
Entrez Gene ID 101714103

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CNTNAP1 ENSCPOG00000008851 (Guinea pig)

Gene Details

contactin associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007948, Guinea pig)

Protein Percentage 90.97%
CDS Percentage 87.23%
Ka/Ks Ratio 0.0547 (Ka = 0.0512, Ks = 0.936)

CNTNAP1 ENSG00000108797 (Human)

Gene Details

contactin associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000264638, Human)

Protein Percentage 88.5%
CDS Percentage 82.36%
Ka/Ks Ratio 0.05104 (Ka = 0.0661, Ks = 1.2944)

Cntnap1 ENSMUSG00000017167 (Mouse)

Gene Details

contactin associated protein-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099398, Mouse)

Protein Percentage 87.2%
CDS Percentage 80.56%
Ka/Ks Ratio 0.04739 (Ka = 0.0719, Ks = 1.5176)

Cntnap1 ENSRNOG00000020277 (Rat)

Gene Details

contactin associated protein 1 (Cntnap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027505, Rat)

Protein Percentage 87.51%
CDS Percentage 80.56%
Ka/Ks Ratio 0.0469 (Ka = 0.0708, Ks = 1.509)

Genome Location

Sequence Coding sequence

Length: 4140 bp    Location: 1482099..1471734   Strand: -
>XM_004859313.1
ATGCGGCTGCGGCTGCTATGCGTCCTGCTCGCCGCCGCGGCCTCGGGAGCTCGGGGCTGGGGCTACTACGGCTGCGATGAGGAGCTGGTGGGGCCGCTCTACGCGCGCTCCCTGGGCGCCTCCTCCTACTATGGGCTTTTCACCACAGCACGCTTCGCCCGGCTGCACGGCATAAGTGGGTGGTCACCCCACACCCGGGATTCAAACCCCTGGCTGCAGATCGACTTGATGAAGAAGCACAGGATCCGCGCTGTGGCCACACAGGGCTCCTTTAATTCTTGGGACTGGGTCACACGCTACATGCTGCTGTACGGCGACCGCGTGGACAGCTGGACACCATTCTACCAGCAAGGGCACAACGCGACCTTCTTTGGCAACGTGAACGAGTCTGCGGTCGTGCGCCACGACCTGCACTACCACTTCACAGCACGCTACGTGCGCATTGTGCCCCTGGCTTGGAACCCTCGAGGCAAGATCGGCCTGCGGCTCGGCCTCTATGGCTGCCCCTACAAGTCCGACATCCTCTACTTCGACGGCGATGACGCCATCTCCTACCGCTTCCCACGGGGCGTCAGCCGCAGCCTGTGGGACGTGATCGCGTTCAGCTTCAAGACGGAGGAGAAGGACGGGCTCCTGCTGCACTCCGAGGGCGCCCAGGGCGACTACGTGACGCTGGAGCTGCAGGGGGCACACCTGCTGCTGCACATGAGCCTGGGCAGCAGCCCCATCCAGCCCAGGCCCGGCCACACCACAGTGAGTGCGGGTGGCGTCCTCAACGACCAGCACTGGCACTACGTGCGCCTGGACCGCTATGGGCGTGAGGCCAACCTCACCCTGGATGGCTATGTGCAGCGCTTCGTGCTCAACGGCGACTTTGAGCGGCTGAACCTGGACTCGGAGATGTTCATCGGGGGGCTGGTGGGCGCTACGCAGAAGAACCTCGCCTACCGGCACAACTTCCGCGGCTGTATTGAGAACGTGATCTTCAACCGGGTCAACATTGCTGACCTGGCCGTGCGGCGCCACTCGAGGATCACCTTCGAGGGCAAGGTGGCCTTCCGATGCCTGGACCCGGTCCCACACCCCATCAACTTTGGGGGACCACACAACTACGTGCAGATCCCCGGCTTCCCGCGCCGTGGACGCCTGGCCGTGTCCTTCCGCTTCCGCACCTGGGACCTCACGGGGCTGCTGCTGTTCTCCAGCCTGGGCGACGGGCTGGGCCACGTGGAGCTGATGCTGAGCGATGGCCAGGTCAATGTGTCCATCGCGCAGGCCGCCCGCAAGCGCCTGCAGTTCGCGGCTGGGTACCGCCTGAACGACGGCTTTTGGCATGAGGTCAATTTTGTGGCCCAGGAGAACCAGGCGGTCATCAGTATCGACGATGTGGAGGGCGCAGAAGTCCGGGTCTCCTACCCTCTGCTCATTCGCACGGGGACCTCGTACTTTTTTGGGGGTTGTCCCAAGCCAGCCAGCCGATGGGGCTGCCACTCCAACCAGACAGCCTTCCATGGCTGCATGGAGCTGCTCAAGGTGGACGGCCAGCTGGTCAACCTCACGCTGGTGGAGTTCAGGCGGCTGGGACACTATGCTGAGGTCCTGTTTGACACATGTGGCATCACCGACAGGTGCAGCCCCAACATGTGTGAGCATGATGGCCGCTGCTACCAGTCTTGGGACGACTTTATCTGCTACTGTGAGCTGACCGGCTACAAGGGCGAGACCTGCCACCAGCCGCTGTATAAGGAATCCTGTGAGGCTTACCGGCTCAGCGGGAAAATCTCCGGCAACTTCACCATCGACCCTGACGGCAGTGGCCCCCTGAAGCCATTCGTGGTGTACTGTGACATCCGGGGTGAGCGGCAGTGGGCTCGGGAAACAGAGACGGGGGGGTGTGCATTGACTATGTGGGGTCACGGGCGGCGGACACTGGCCTTCAGGTCAGTACAGCTTGGATCCCTGCCTGTTGTCCCTAAGGGGGACTGTGCTGGGGAGTCCCCACCAGCCACCTCTGCCGTCCCCGAGTGGCGGGAGCAGTGGGCAGGGAGGCGGAACAGACGCCCTGGCTCGGCCTGGGCCCTGTCCCCCACCAGAGAACCGAGCGTGGACGGTGGTGCGGCACGACAGGCTGTGGACAACACGCGTGTCAGGCTCCAGCATGGAGCGGCCCTTCTTGGCGGCCGTGCAGTACTGGAACGCATCGTGGGAGGAGGTCGGAGCGCTGGCCAACGCCTCGCAGCACTGCGAGCAGTGGATCGAGTTCTCCTGCTACAACTCCCGGCTGCTCAACACGGCAGCTTCTGGATCGGCCGCCACGAGGAGCAGCACTTCTACTGGGGCGGCTCCCAGCCTGGCATCCGGCGCTGCGCCTGCGGCCTGGACCACAGCTGCGTGGACCCTGCCCTGCACTGCAACTGCGACGCTGACCAGCCACAGTGGAGAACCGACAAGGGGCTGCTGACCTTTGTGGACCACCTGCCTGTCACCCAGGTGGTGGTGGGCGACACCAACCGCTCCAACTCCGAGGCCCAGTTCTTCCTGAGGCCTTTGCGCTGCTACGGGGACCGAAACTCCTGGAATACCATTTCCTTCCACACCGGGGCCGCGCTGCGTTTCCCCGCAATCCGTGCCAACCACAGCCTGGACGTGTCCTTCTACTTCCGGACCTCGGCGCCTTCGGGCGTCTTCCTGGAGAACCAAGCAGGCCTCTACGGCGGGTGGCGCCGGCCGTACCTGCGTGTGGAGCTCAACACGTCCCGGGACGTGGTCTTCGCCTTCGACGTGGGGAACGGGGACGAGAACCTGACGGTCCACTCCGATGACTTCGAGTTCAGCGACGATGAGTGGCACCTGGTGAGGGCCGAGATCAACGTGAAGCAGGCACGACTGCGCGTGGACCACCGGCCGTGGGTGGTGCGCCCCATGCCCCTGCAGACCTACCTCTGGCTGGAGTACGACCAGCCGCTCCACGTGGGATCGGCGGAGCTCAAGCGGCGCCCCTTTGTGGGCTGCCTGAGGGCCATGCGTCTGAACGGGGTGACGCTGAACCTGGAGGGCCGGGCCAACGCCTCCGAGGGGACGTCCCCCAACTGCACGGGCCGCTGTGCCCACCCGCGCTTCCCCTGCTCCCACGGTGGCCGCTGCGTGGAGCACTACAGCTACTACACCTGCGATTGCGACCTCACAGCTTTCGACGGGCCCTACTGCAACCAGGACATCGGTGGCTTCTTTGAGCCGGGCACCTGGATGCGCTATAACCTGCAGTCGGCACTGCGCTCGGCTGCCCGCGAGTTCTCCCACATGCTGAGCCGCCCAGTCCCTGGCTATGAGCCTGGCTACGTCCCTGGCTATGACTCCCCCGGCTACGTCCCTGGCTACCACGGCCCCGGCTACCGGCGGCCCGACTACCCGAGGCCTGGGCGGCCCGTGCCCGGGTACCGGGGCCCCGTGTACAATGTCACAGGGGAGGAGGTCTCCTTCAGCTTCAGCACCAGCGTGGCGCCCGCGGTGCTGCTGTACGTCAGCTCCTTCGTGCGCGACTACATGGCGGTGCTCATCAAGGAGGACGGGACCCTGCAGCTGCGGTACCAGCTGGGCACCAGCCCCTACGTGTACCCGCTGACCACCCGGCCTGTGACGGATGGGCAGCCGCACAGCGTCAACATCACCCGGGTCTACCGCAACCTCTTCATCCAGGTGGACTACTTCCCGCTGACGGAGCAGAAGTTCTCGCTGCTGGTGGACAGCCAGCTGGACTCACCCAAGGCCTTGTACCTGGGGCGCGTGATGGAGACGGGTGTCATCGACCCCGAGATCCAGCGCTACAACACCCCGGGCTTCTCGGGCTGCCTTTCCGGCGTCCGCTTCAACAACGTGGCCCCCCTCAAGACCCACTTTCGCAGCCCTCGGCCCATGACCGCTGAGCTGGCCGAGGCCCTCCGCGTGCAGGGCGAGCTGGCTGAGTCCAACTGCGGTGCCATGCCCCGCCTGGTCTCCGAGGTGCCCCCTGAGCTTGACCCCTGGTACCTGCCCCCAGACTTCCTGTACTACCATGACGACGGCTGGGTTGCCATCCTCTTAGGCTGTGAGTGGCAGACCCCTAACCTGACCCCGGGCCCCGTCCCCGACCCGGGCCACTGA

Related Sequences

XP_004859370.1 Protein

Cntnap1 PREDICTED: contactin-associated protein 1 isoform X2 [Heterocephalus glaber]

Length: 1379 aa      View alignments
>XP_004859370.1
MRLRLLCVLLAAAASGARGWGYYGCDEELVGPLYARSLGASSYYGLFTTARFARLHGISGWSPHTRDSNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQQGHNATFFGNVNESAVVRHDLHYHFTARYVRIVPLAWNPRGKIGLRLGLYGCPYKSDILYFDGDDAISYRFPRGVSRSLWDVIAFSFKTEEKDGLLLHSEGAQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSAGGVLNDQHWHYVRLDRYGREANLTLDGYVQRFVLNGDFERLNLDSEMFIGGLVGATQKNLAYRHNFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNYVQIPGFPRRGRLAVSFRFRTWDLTGLLLFSSLGDGLGHVELMLSDGQVNVSIAQAARKRLQFAAGYRLNDGFWHEVNFVAQENQAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFRRLGHYAEVLFDTCGITDRCSPNMCEHDGRCYQSWDDFICYCELTGYKGETCHQPLYKESCEAYRLSGKISGNFTIDPDGSGPLKPFVVYCDIRGERQWARETETGGCALTMWGHGRRTLAFRSVQLGSLPVVPKGDCAGESPPATSAVPEWREQWAGRRNRRPGSAWALSPTREPSVDGGAARQAVDNTRVRLQHGAALLGGRAVLERIVGGGRSAGQRLAALRAVDRVLLLQLPAAQHGSFWIGRHEEQHFYWGGSQPGIRRCACGLDHSCVDPALHCNCDADQPQWRTDKGLLTFVDHLPVTQVVVGDTNRSNSEAQFFLRPLRCYGDRNSWNTISFHTGAALRFPAIRANHSLDVSFYFRTSAPSGVFLENQAGLYGGWRRPYLRVELNTSRDVVFAFDVGNGDENLTVHSDDFEFSDDEWHLVRAEINVKQARLRVDHRPWVVRPMPLQTYLWLEYDQPLHVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGRCAHPRFPCSHGGRCVEHYSYYTCDCDLTAFDGPYCNQDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPVPGYEPGYVPGYDSPGYVPGYHGPGYRRPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSVAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYPLTTRPVTDGQPHSVNITRVYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLKTHFRSPRPMTAELAEALRVQGELAESNCGAMPRLVSEVPPELDPWYLPPDFLYYHDDGWVAILLGCEWQTPNLTPGPVPDPGH