Sequence details NCBI ID: XM_004859208.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gpatch8
Gene Name G patch domain containing 8, transcript variant X2
Entrez Gene ID 101713757

Database interlinks

Part of NW_004624795.1 (Scaffold)

For more information consult the page for NW_004624795.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GPATCH8 ENSCPOG00000009067 (Guinea pig)

Gene Details

G patch domain containing 8

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008142, Guinea pig)

Protein Percentage 83.68%
CDS Percentage 84.24%
Ka/Ks Ratio 0.16383 (Ka = 0.0965, Ks = 0.5891)

GPATCH8 ENSG00000186566 (Human)

Gene Details

G patch domain containing 8

External Links

Gene Match (Ensembl Protein ID: ENSP00000467556, Human)

Protein Percentage 78.72%
CDS Percentage 76.14%
Ka/Ks Ratio 0.08866 (Ka = 0.1302, Ks = 1.4683)

Gpatch8 ENSMUSG00000034621 (Mouse)

Gene Details

G patch domain containing 8

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000120649, Mouse)

Protein Percentage 76.95%
CDS Percentage 74.52%
Ka/Ks Ratio 0.08054 (Ka = 0.1414, Ks = 1.7554)

Gpatch8 ENSRNOG00000021044 (Rat)

Gene Details

Protein Gpatch8

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000047081, Rat)

Protein Percentage 75.73%
CDS Percentage 74.12%
Ka/Ks Ratio 0.08622 (Ka = 0.1511, Ks = 1.7522)

Genome Location

Sequence Coding sequence

Length: 4218 bp    Location: 619532..678800   Strand: +
Raw sequence   
>XM_004859208.1
ATGGGCATGGGCCGCATGGAGATGGAGCTCGATTATGCCGAAGATGCAACCGAACGGCGCCGTGTCCTAGAAGTGGAAAAAGAAGACACAGAGGAGCTGAGGCAGAAGTACAAGGATTACGTTGACAAAGAGAAGGCGATTGCCAAGGCCTTGGAAGACCTCCGCGCCAACTTCTACTGTGAGCTCTGTGACAAGCAGTACCAGAAGCACCAGGAGTTCGACAACCACATCAACTCCTATGACCACGCACACAAGCAGAGACTAAAAGATCTCAAGCAGAGGGAATTTGCCCGAAATGTCTCTTCAAGGTCCCGCAAGGATGAGAAGAAACAAGAAAAAGCCCTGCGGAGGCTCCATGAGTTGGCAGAGCTAAGAAAACAAGCAGAATGCGCACCCGGAAGTGGCCCTATGTTCCGACCAACCACGGTTGCTGTGGATGAAGATGGAGGAGATGAGGACAAGGATGAATCGGCTACCAACAGCGCCTCGGGGGCCGCCGCAGGGTGCAGCCTGGGCCCCGAGTTCTCCACGGAGAAAGGAGGCCCCTTCACCACCGTTGCAGGCACTGGCTCCACTGGGCTGCCGCAGGCTTCCGGGCCGGCCGCCCCCAGCGTCAGCTTTGGTTTCAAGAACAACCAGGGGACCCCACTGCAGAAACTGGGGGTGTCGTTTTCCTTCGCCAAGAAGGCTCCGGTCAAACTTGAGTCCATCGCTTCGGTGTTCAAGGACCACGCAGAGGAAGGGTCCTCCGAGGAAGGGACAAAGCCCGACGAGAAGGGTTCTGACCAAGGGCTGCAGAAGGCAGGGGACGCCGACGGGGGCGGGAGCACCGATGGCAAAAAGGAAGACGAGGACCCGCAGGACGGCGCAGCCCTGGCCTCCACGCTGTCCAAGCTGAAGCGGATGCGCCGGGAGGAGGGCGCCGGCGTGGTGGAGCCCGAGTATTACCACTACATCCCACCTGCGCACTGCAAGGTGAAGCCCCACTTCCCCTTCCTGCTCTTCATGCGGGCCAGCGAGCAGATGGAGGGTGAGGCCAGCTCGCACCCCAAGGGCACCCCGGACAGCAAGAAGAGCGGCTCCCCCAAGCCAAAGGGCTGTGTCAGGGCAGCCCCCAGCCAGGCAGCAGAGCCGGGGGCCAGCGAGCGCTTGGAGCCACCCAAGGAACCAAAGGAAACGAAAGAGGCAACAGCAGTGGCTGGGGCCGAGCCCGCCCAGCCGCGGGGCAAAGCCGAGGCCCGGAAGGTCCCCTCGGGGTTCCCTGGGGAGCAGGGCCGGCCCGTGTCTGAGGCGCAGGTGCGCCAGCCCGAGCCTGCCAAAGAGCCCAGTGCGCCTGGAGACAGTGTGGCAGGGAGAGACAGCCAGGGGCGTCCCCGGCACCCTACGGGCCCTTTCTTCCCAGTGCTGAGCAAGGACGAGAGCACGGCCCTGCAGTGGCCGTCGGAGCTGCTTATCTTCACCAAGGCGCAGCCCTCCGTCTCCTACAGCTGCAACCCTCTCTACTTCGACTTCAAGCTTTCCAGGAACAAGGACGCCAGAGCCAAAGGGGCAGAAAGAGCGAAGGACGCGGGCGGCCCCTCCAGGGAGGCCCTCCCCGGCCCTGAGGCCAGCGGGCCAGGCGGGGACAAGGACGCGGGTGAGCCCCAGGCAGACGGAGGGCCCCCTGCTGCTGCTGCTGCTCCTCTTGCTCCTGCTCGGGAGCCGGAGCCCGAGCCCCAGGACACCGGGCAGAGCCTGGCTGGCCGAAAGGAGCGCCGCGGGCGGACGCACCGGCACAAGAAAAGGAAGAAGCACAAGAAGTCTGGCAGGCACAAGCGCAGGCACAAGGCCGACGCTGACGAGAAGGGATCGGGATCGAGGGCCGACCCGGGGGACAAGTCCCGGAAGCGCAAGAAGCGGAAGCGCAAGAAGAAGTCCGGGGGCGCGGCCGACTCAGAGCGGGGCCCCAAGCCCGAGCCCCCAGGCAGCGGCAGCCCCGCCCCACCCAGGCGGCTCCGGAGGCATGACGAGTCCCAGCGGAGACCCCTGCCCGCCGCCGACGAGAGCGGCGGCGGCCAGCGTGACGCGGGCGGGGGCGCACAGGAGCGTGGCGGGCGCAGGCAACCGGGCGAGCCCCCCGCTACCTCCTGCCAGCGCCGGGCCAGCGCCCCAAGGACCGGCAACACCCACCGCCACGGCCGGCCCAGCAGCGGGGAGGAGGACAGCGACGGCGGTGCTGCCCGCCGCCCGCGCCAGGAGTCCCCGGCCCAGTACAGCGACGAAGACGACGACGACGAGGAGGAGGAGGACTCGGGCAGCGCACGCTCCCGAAGCCGCTCGCGCAGCCGCCGCCGCTCCTCCCGCCGCTCTTACTCCAGCAGCTCGGCTGCGTCCTCCGACCAGAGCTGCTACAGCAGGCCCCGCAGCTACTCCGACGACAGCTACAGCGACTACAGCGAGCGCTCGCGCCGGCACTCCAAGCGCTCCCACGGCTCCGACGACTCGGACTACGCCAGCCCCAAGCGCCGCAAGTACTCCTCCTCCGAAGACGATGACTACAGCCTCAGCGGCAGCCCTTCCCGCAGCCGCTCCCGCAGCCGGTCCAGGGAGCGCTCTCCCACCCGCTCGCGCAGCAGCAGCCACAGCCGGAGCCAGCGGAGGAGCCGCAGCACCACCGCGCACAGCTGGCAGCGCAGCCGCAGCTACAGCCGGGACCGAAGCCGCAGCACTCGCAGCCCTTCCCAGAGGTCGGGCTCCAGGAAGGGGTCGTGGGGCCACGACAGCCCTGAGAACAGGCGATCCAGCCGCCGGGACTTCATTCGCTCCAAGATCTATCGCTCTCAGTCCCCCCACTATTTCTGGTCAGGCCGGGGCGACTGTCCAGGGAAGAAAGACGACAGCCAAGGAGATGACAGCAAAGCATCAGGCCCGCCCTCCCAGAACAGCAGCACTGGCACGGGGAGAGGGTCAGAAAGTGACTGCGGCCCCGAGGATAAGAACTCTGTCACTGCTAGACTGCTGCTGGAGAAGGTCCAGTCCAGGAAAGGGGAGCGGAAGCCCAGCATGGGCGAGGAGGTGCTGGCCACCCCCAATAAGGCTGGGCTCAAGCTCAAGGACCCCCCACAAGGCTACTTTGGGCCCAAGCTCCCCCCTTCCCTGGGCAGCAAGCCGGTCCTTCCGTTGATAGGGAAGCTCCCAACTACCCGAAAGCCCAACAGGAAATGTGAGGAGTCTGGGGTAGAAAAGGGGGAAGAGCAAGACCAGTCAGAGACAGAAGAGGGGCCCCCCGGGAGTGGATGCCAGGTCCCTGCCGAGGATACCGCTGGCCCCTTATCTGAGCTGCCCCCGGGAGAACCAACATCCAAAGAAGCTACTGCCGCCTACCCTGTGGCTCCACTGGGCGCCCCGGCGCACTCCGACTGCTACCCTGGGGACCCAGCCAGCTCCCATAGCTACCTCCCTGACCCCAGCAATGGGGACACCCTGGAGCCCCCGGAGAGCGGCAGCCAGCCAGGCCCCGTGGACGCTGGCTTGCTGCCCGCAGCCCCTGACCTGGAGCACTTCCCAGGCTACGCACCTCCCAGCAGGGAGCCCCGCGGCGAGTCCCCCGAGGGCGCGGAGGACGCCTCGCTGGCCCCCCTGGAGAGCCAGCCCATCACCTTCACGCCCGAGGAGATGGAGAAGTACAGCAAGCTCCAGCAGGCGGCGCAGCAGCACATCCAGCAGCAGCTGCTGGCCAAGCAAGCGAAGGCCTTCCCCGCCTCGGCCGCCCTGGCCCCGGCCGCCCCCGCCCTGCAGCCCATCCACATCCAGCAGCCGGCCGCGGCCTCGGCCACCTCCATCACCACGGTGCAGCACGCCATCCTGCAGCACCACGCGGCCGCCGCCGCCGCCGCCGCCATTGGCATCCACCCCCACGCCCACCCGCAGCCCCTGGCGCAGGTGCACCACATCCCCCAGCCCCACCTGACGCCCATCTCCCTGTCGCACCTCACTCACTCCATCATCCCCGGCCACCCCGCCACCTTCCTGGCCAGTCACCCCATCCACATCATCCCCGCCTCCGCCATCCACCCCGGGCCCTTCACCTTCCACCCTGTCCCACACGCTGCCCTCTACCCCACCCTGCTGGCCCCTCGGCCTGCTGCAGCAGCTGCCACGGCCCTGCACCTCCACCCACTGCTTCACCCCATCTTCTCAGGGCAGGAGCTGCAGCACCCGCCCAGCCATGGCACGTGA

Related Sequences

XP_004859265.1 Protein

Gpatch8 PREDICTED: G patch domain-containing protein 8 isoform X2 [Heterocephalus glaber]

Length: 1405 aa      View alignments
>XP_004859265.1
MGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDEKKQEKALRRLHELAELRKQAECAPGSGPMFRPTTVAVDEDGGDEDKDESATNSASGAAAGCSLGPEFSTEKGGPFTTVAGTGSTGLPQASGPAAPSVSFGFKNNQGTPLQKLGVSFSFAKKAPVKLESIASVFKDHAEEGSSEEGTKPDEKGSDQGLQKAGDADGGGSTDGKKEDEDPQDGAALASTLSKLKRMRREEGAGVVEPEYYHYIPPAHCKVKPHFPFLLFMRASEQMEGEASSHPKGTPDSKKSGSPKPKGCVRAAPSQAAEPGASERLEPPKEPKETKEATAVAGAEPAQPRGKAEARKVPSGFPGEQGRPVSEAQVRQPEPAKEPSAPGDSVAGRDSQGRPRHPTGPFFPVLSKDESTALQWPSELLIFTKAQPSVSYSCNPLYFDFKLSRNKDARAKGAERAKDAGGPSREALPGPEASGPGGDKDAGEPQADGGPPAAAAAPLAPAREPEPEPQDTGQSLAGRKERRGRTHRHKKRKKHKKSGRHKRRHKADADEKGSGSRADPGDKSRKRKKRKRKKKSGGAADSERGPKPEPPGSGSPAPPRRLRRHDESQRRPLPAADESGGGQRDAGGGAQERGGRRQPGEPPATSCQRRASAPRTGNTHRHGRPSSGEEDSDGGAARRPRQESPAQYSDEDDDDEEEEDSGSARSRSRSRSRRRSSRRSYSSSSAASSDQSCYSRPRSYSDDSYSDYSERSRRHSKRSHGSDDSDYASPKRRKYSSSEDDDYSLSGSPSRSRSRSRSRERSPTRSRSSSHSRSQRRSRSTTAHSWQRSRSYSRDRSRSTRSPSQRSGSRKGSWGHDSPENRRSSRRDFIRSKIYRSQSPHYFWSGRGDCPGKKDDSQGDDSKASGPPSQNSSTGTGRGSESDCGPEDKNSVTARLLLEKVQSRKGERKPSMGEEVLATPNKAGLKLKDPPQGYFGPKLPPSLGSKPVLPLIGKLPTTRKPNRKCEESGVEKGEEQDQSETEEGPPGSGCQVPAEDTAGPLSELPPGEPTSKEATAAYPVAPLGAPAHSDCYPGDPASSHSYLPDPSNGDTLEPPESGSQPGPVDAGLLPAAPDLEHFPGYAPPSREPRGESPEGAEDASLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQAKAFPASAALAPAAPALQPIHIQQPAAASATSITTVQHAILQHHAAAAAAAAIGIHPHAHPQPLAQVHHIPQPHLTPISLSHLTHSIIPGHPATFLASHPIHIIPASAIHPGPFTFHPVPHAALYPTLLAPRPAAAAATALHLHPLLHPIFSGQELQHPPSHGT