Details from NCBI annotation

Gene Symbol Cgnl1
Gene Name cingulin-like 1, transcript variant X2
Entrez Gene ID 101702451

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CGNL1 ENSCPOG00000026550 (Guinea pig)

Gene Details

cingulin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017376, Guinea pig)

Protein Percentage 79.92%
CDS Percentage 82.5%
Ka/Ks Ratio 0.13619 (Ka = 0.1083, Ks = 0.795)

CGNL1 ENSG00000128849 (Human)

Gene Details

cingulin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000281282, Human)

Protein Percentage 83.45%
CDS Percentage 83.4%
Ka/Ks Ratio 0.1329 (Ka = 0.0931, Ks = 0.7008)

Cgnl1 ENSMUSG00000032232 (Mouse)

Gene Details

cingulin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072672, Mouse)

Protein Percentage 77.93%
CDS Percentage 78.94%
Ka/Ks Ratio 0.12605 (Ka = 0.1349, Ks = 1.07)

Cgnl1 ENSRNOG00000017439 (Rat)

Gene Details

cingulin-like 1 (Cgnl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000023458, Rat)

Protein Percentage 77.24%
CDS Percentage 79.11%
Ka/Ks Ratio 0.13421 (Ka = 0.1355, Ks = 1.0097)

Genome Location

Sequence Coding sequence

Length: 3873 bp    Location: 14357697..14215252   Strand: -
>XM_004855746.1
ATGGAGCTGTACTTTGGTGAATACCGACACGTGCAGCAGGAATACGGCGTCCACCTGCGACTAGCAAGTGAGGCGACCAAGAAAACAAGGAGTTCCCCACACTCCAAGACAGGCTCCTATGGTGTCAGTATCAGAGTCCAGGGGATTGATGGTCACCCCTACATAGTCCTCAACAACACGGAGCACTGTCTAGCAGGCAGGCCTTTTTCAGAAAATGGGCCCTCCTTTCCATCTTCGATGATCAGTGACCTGCCTGGATGCTCCGGCTCTGTACCAAAGGAGAGCAGCATGGAAGAGCCACCGCACCCAGAGAACTCATACGCCCAGCCCAGCCCGCCCAGAAACCCGAAGCAGCCCTCTCTCCACGAGGGCAGGAACAGTGTCCTAGAACGAAAAGACATCCCAGGGAAGTCTTCCCACCTGCTGAACTTTCAAAGGCACCCAGAGCTTTTGCAGCCCTACGACCCTGACAAGAATGACCTGAACTTGCACAATCTCCAAGCTCCCGAGAGCGACGGGTTGAACGGTTTGGCAGAAGAAGGTGCTAACAACAAGAAGCAGCCTTGGGCTTGTTCTTCCAAACCTGGCAACCCCCCGCCCACCAGCCCTTCCCTGGAGTCCACCCGCCTGTGCAGCTCTGTGGTCACAGAGGAGCCTGAGAAGCAGACCTCAGTGTGTGTCAATGTTCAGAGCTGCATGAAGGAAGGGCGGGTGGGGGACGCCCTTTCCCCTAGCAGGAGGTCCCTGTCTACCCTCAGCCCACAGGCCCACGGCGAAATCAAGAAAACCAGGCCAGATGTTCTTCCCTTCCGGCGACAAGACTCAGCGGGCCCCATCCTGGACGGAGCTCGCTCACGGAGGTCCTCATCCTCCTCCACCACGCCCACCTCAGCCAACTCTTTGTATAGGTTTCTGCTTGATGATCAGGAATGTGCCATCCATGCTGACAACGTCAACCGGCACGAAAACAGGAGGTATATCCCCTTCTTCCCCGGAACTGGGAGGGATATCGACACGGGCTCAATTCCTGGTGTGGATCAGTTGATTGAAAAATTTGATCAAAAGCCTGGACTTCAGAGAAGAGGAAGGTCTGGGAAGCGAAACAGAATCAACCCAGATGACAGGAAGAGGTCCCGGAGCGTGGACAGTGCGTTTCCTTTTGGTTTACAGGGTAACTCAGAGTACCTGACAGAGTTCAGCAGGAACCTGGGCAAGTCCAGTGAACGCCTCCTCCGGCCGTCCCAGCTGTGTCCCCAGAGGTCCCTGGCTCAGGAGTACCTTGGGAAGCAGGGCATGGGCCGAGCCTTTGCCAAGCTGCAGGGAGCCATGCACGGCGCCCAGGGTGCCCCACAGAACAAAGATGGGAAAGTTCCAGAAAACAAAGGAGGTCGGGAAGGCACCGTGGTGGTTTGTGCACCCTCCCTTCCAGCTCAGGCCAGAAAGGAGGATGAAATAAAAACAGCCACTGCCACGCTGATGTTGCAGAATCGGGCCGTGGCAACCTCACCGGATTCCGGCGCCAAGAAAATTTCCATGAAGACATTTTCTTCCAACTCAAATACTCAGGCCACACCAGATCTCTTAAAGGGCCAGCAAGAGCTCAACCAACAAGCCAATGAGGAGACGGCCAAGCAGATACTTTATAATTACCTCAAAGAAGGAAGCTCTGACAATGAGGATGCCACTAAAAGGAAAGTCAACTTGGTCTTTGAGAAAATCCAGACTTTAAAGTCTCGAGCAGCAGGGAGTGCCCAAGGGAATCCTCAAACATCTAGCTCCTCATCTGAAGTCAAAGATCTGTTGGAACAGAAAAACAAGTTGACCTCAGAAGTGGCTGAACTTCAGCGGCAACTTCAACTAGAGGTCAAGAACCAGCAGAACATCCAAGAAGAGAGAGAGCGCCTGAGAGCGGACTTGGAAGAAGTGCGGAGCCAGCTGGACAGGCGGGTGGAGGACAGTGCTGCGCTACAGCAGCGCCTGGAGGACAGCGAGGCTGAGCTTCGAAAGAGCCTGGAGGAGCTCTTCCAGGTGAAGATGGAGCGGGAACAGCACCAGACTGAGATCAGGGATCTGCAGGACCAGCTCTCAGAGATGCATGATGAACTGGACAGTGCCAAGCACTCAGAGGACAGGGAGAAGGCGGCTCTGATCGAGGAGCTTCTGCAGGCAAAGCGGGACCTTCACGATCTGCTGATTGCCAAAGAGGAGCTGGAAGATCTCTTGAGAAAGCGAGAGCGTGAGCTCACTGCCCTGAAGGGCGCCCTGAAAGAAGAGGTTTCCAGCCACGACCAGGAGATGGACAGGCTGAAGGAGCAGTACGACATGGAGCTGCAGGCCCTGAGGGAGAGTGTGGAGGAGGCAACCAAGAATGTCGAAGTCCTGGCCAGCTGGAGCAACACTTCAGAACAGACTCAGGTGGGGGCTGAGATGCGGGAAAAAGCGCTGAAGGAGGAGATGGAGAAGCTGCAAGGCAGAGCTGAGGAGCTGGAGTGCAGAGTGGCCGAGCTGCAAGCGCAGCTGGAGGACGGCAAAGGTGGTGAGGCCCAGGCTGAGGAAGCGCTCCGGAAGTGCAAGGGTGAAGTGTGGCAGCTAGAGGAGGCCCTTGTACACGCCAGGAAGGGAGAAGAAGAAGCTGTGTCAGCCAGAAGGGCCCTGGAGAGTGAGCTGGCAGATGCTCAGCAAGAACTGAGTCGGACCATCCAGGAGCAGAAGCAGCTGTCCAAGAAGCTGCAAGATGAGACTGAGCAGAAGGAGCAGTTAAGAAGGTTAAAGAATGAGATGGACAGTGAGCGGCGACATCTCGGCGAGACCATCGAGAAGCTGCAGAAGGAGATGGCCGACATTGTGGAGGCATCTCGCACATCGACCCTGGAGCTCCAGAACCAGCTGGATGAGTACAAGGACAAAAATCGCAGGGAGCTCGCGGAAGTGCAGAGGCAGTTGAAGGAGAAAACCGTTGAGGCAGAAAATTCCCACCTGGCCGCCATGAAACTGCAGGATGAGATGCGCCTGATGGAGGAGGAGATACGGGACCACCAGCGGGCTCAGGACGAAGCGCTCACGAAAAAGCAGCTGCTGGAGCAAACGCTGAAGGACCTGGAACATGAGCTGGAGGCCAGGAGTCACCTCCGAGATGACCGAAGCCGGCTGGTCAAGCAGATGGAGGACAAGGTGTCTCAGCTGGAGATGGAGCTGGAAGAGGAAAGAAACAACTCAGATTTGCTGTCTGAGAGGATCACTCGGAGCAGGGAGCAGATGGAGCAGATGAGGAACGAGCTTCTTCAGGAGCGAGCTGTGCGACAAGACTTGGAGTGTGACAAGATTTCCCTGGAGAGACAGAACAAGGACTTGAAAAGCCGGATTGGACACCTGGAAGGCTCCTACAGGTCCAGCAAGGAAGGGCTGGTGGTGCAGATGGAGGCCCGGATCGTGGAGCTGGAGGACCGACTGGAGAGCGAGGAGAGGGACCGGGCCAGTCTGCAGCTCAGCAACCGCAGGCTGGAGCGGAAGGTGAAGGAGCTGGTGATGCAGGTGGATGACGAGCACCTGTCCCTGACAGACCAGAAGGACCAGCTGAGCTTGCGCTTGAAAGCAATGAAGCGGCAGGTGGAAGAGGCCGAGGAGGAAATCGATCGGCTGGAAAGTTCTAAGAAGAAGCTGCAAAGGGAGCTGGAGGAGCAGGTGGATGTGAATGAGCAGCTGCAGGGGCAGCTCAGCTCCTTGAAGAAGGACTTAAGACTTAAGAAGCTGCCGAGTAAAGTTCTGGATGACATGGATGATGACGACGACCTCAGCACCGATGGCGGGAGCCTCTATGAAGCACCGCTGAGCTTCACCTTCCCCAGGGACAGCGCTGTGGTCAGCCAGATCTAA

Related Sequences

XP_004855803.1 Protein

Cgnl1 PREDICTED: cingulin-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 1290 aa      View alignments
>XP_004855803.1
MELYFGEYRHVQQEYGVHLRLASEATKKTRSSPHSKTGSYGVSIRVQGIDGHPYIVLNNTEHCLAGRPFSENGPSFPSSMISDLPGCSGSVPKESSMEEPPHPENSYAQPSPPRNPKQPSLHEGRNSVLERKDIPGKSSHLLNFQRHPELLQPYDPDKNDLNLHNLQAPESDGLNGLAEEGANNKKQPWACSSKPGNPPPTSPSLESTRLCSSVVTEEPEKQTSVCVNVQSCMKEGRVGDALSPSRRSLSTLSPQAHGEIKKTRPDVLPFRRQDSAGPILDGARSRRSSSSSTTPTSANSLYRFLLDDQECAIHADNVNRHENRRYIPFFPGTGRDIDTGSIPGVDQLIEKFDQKPGLQRRGRSGKRNRINPDDRKRSRSVDSAFPFGLQGNSEYLTEFSRNLGKSSERLLRPSQLCPQRSLAQEYLGKQGMGRAFAKLQGAMHGAQGAPQNKDGKVPENKGGREGTVVVCAPSLPAQARKEDEIKTATATLMLQNRAVATSPDSGAKKISMKTFSSNSNTQATPDLLKGQQELNQQANEETAKQILYNYLKEGSSDNEDATKRKVNLVFEKIQTLKSRAAGSAQGNPQTSSSSSEVKDLLEQKNKLTSEVAELQRQLQLEVKNQQNIQEERERLRADLEEVRSQLDRRVEDSAALQQRLEDSEAELRKSLEELFQVKMEREQHQTEIRDLQDQLSEMHDELDSAKHSEDREKAALIEELLQAKRDLHDLLIAKEELEDLLRKRERELTALKGALKEEVSSHDQEMDRLKEQYDMELQALRESVEEATKNVEVLASWSNTSEQTQVGAEMREKALKEEMEKLQGRAEELECRVAELQAQLEDGKGGEAQAEEALRKCKGEVWQLEEALVHARKGEEEAVSARRALESELADAQQELSRTIQEQKQLSKKLQDETEQKEQLRRLKNEMDSERRHLGETIEKLQKEMADIVEASRTSTLELQNQLDEYKDKNRRELAEVQRQLKEKTVEAENSHLAAMKLQDEMRLMEEEIRDHQRAQDEALTKKQLLEQTLKDLEHELEARSHLRDDRSRLVKQMEDKVSQLEMELEEERNNSDLLSERITRSREQMEQMRNELLQERAVRQDLECDKISLERQNKDLKSRIGHLEGSYRSSKEGLVVQMEARIVELEDRLESEERDRASLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLSLRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQVDVNEQLQGQLSSLKKDLRLKKLPSKVLDDMDDDDDLSTDGGSLYEAPLSFTFPRDSAVVSQI