Details from NCBI annotation

Gene Symbol Snapc5
Gene Name small nuclear RNA activating complex, polypeptide 5, 19kDa, transcript variant X1
Entrez Gene ID 101715965

Database interlinks

Part of NW_004624781.1 (Scaffold)

For more information consult the page for NW_004624781.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNAPC5 ENSCPOG00000003058 (Guinea pig)

Gene Details

small nuclear RNA activating complex, polypeptide 5, 19kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002768, Guinea pig)

Protein Percentage 61.22%
CDS Percentage 66.67%
Ka/Ks Ratio 0.52535 (Ka = 0.4058, Ks = 0.7725)

SNAPC5 ENSG00000174446 (Human)

Gene Details

small nuclear RNA activating complex, polypeptide 5, 19kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000319597, Human)

Protein Percentage 55.1%
CDS Percentage 64.63%
Ka/Ks Ratio 0.805 (Ka = 0.5155, Ks = 0.6404)

Snapc5 ENSMUSG00000032398 (Mouse)

Gene Details

small nuclear RNA activating complex, polypeptide 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034965, Mouse)

Protein Percentage 50.0%
CDS Percentage 56.54%
Ka/Ks Ratio 0.43438 (Ka = 0.6163, Ks = 1.4187)

Snapc5 ENSRNOG00000010156 (Rat)

Gene Details

small nuclear RNA activating complex, polypeptide 5 (Snapc5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013490, Rat)

Protein Percentage 50.51%
CDS Percentage 57.58%
Ka/Ks Ratio 0.40034 (Ka = 0.5782, Ks = 1.4442)

Genome Location

Sequence Coding sequence

Length: 330 bp    Location: 6216277..6218412   Strand: +
>XM_004855602.1
ATGCTGAGCCGGCTCCAGGAGCTACGCAAGGAAGAGGAGACGCTGCTACGGTTGAAAGCGGCCCTACACGACCAGCTGAACCGCCTCAAGGTTGAAGAATTGGCCCTCCGATCGATGATCAATTCTACAGCAGAGGATGGGAAGGTTTCTTTTCACTCTGCAGCTGAACAGTCACAGGATGTAAGCTTCATCAAGTACAAGCCCAGGGAGGGAATGCAAAGCCTGCTCTGCTCCTTCCTGCTTTTGTCAAAAATTGTGGTAAAGCACATTACCAAACCCCAAGGATTCTGGGAACTGCCAAGGTGCTGGAGATTAAACCCAGAGCCTTGA

Related Sequences

XP_004855659.1 Protein

Snapc5 PREDICTED: snRNA-activating protein complex subunit 5 isoform X1 [Heterocephalus glaber]

Length: 109 aa      View alignments
>XP_004855659.1
MLSRLQELRKEEETLLRLKAALHDQLNRLKVEELALRSMINSTAEDGKVSFHSAAEQSQDVSFIKYKPREGMQSLLCSFLLLSKIVVKHITKPQGFWELPRCWRLNPEP