Details from NCBI annotation

Gene Symbol Whsc1l1
Gene Name Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X3
Entrez Gene ID 101703406

Database interlinks

Part of NW_004624780.1 (Scaffold)

For more information consult the page for NW_004624780.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WHSC1L1 ENSCPOG00000014573 (Guinea pig)

Gene Details

Wolf-Hirschhorn syndrome candidate 1-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013130, Guinea pig)

Protein Percentage 96.04%
CDS Percentage 94.92%
Ka/Ks Ratio 0.13348 (Ka = 0.0202, Ks = 0.1517)

WHSC1L1 ENSG00000147548 (Human)

Gene Details

Wolf-Hirschhorn syndrome candidate 1-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000313983, Human)

Protein Percentage 94.92%
CDS Percentage 92.72%
Ka/Ks Ratio 0.10619 (Ka = 0.026, Ks = 0.2451)

Whsc1l1 ENSMUSG00000054823 (Mouse)

Gene Details

Wolf-Hirschhorn syndrome candidate 1-like 1 (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117778, Mouse)

Protein Percentage 91.02%
CDS Percentage 88.18%
Ka/Ks Ratio 0.11624 (Ka = 0.0484, Ks = 0.4165)

Whsc1l1 ENSRNOG00000015621 (Rat)

Gene Details

Wolf-Hirschhorn syndrome candidate 1-like 1 (Whsc1l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060879, Rat)

Protein Percentage 89.07%
CDS Percentage 86.77%
Ka/Ks Ratio 0.1271 (Ka = 0.0596, Ks = 0.4686)

Genome Location

Sequence Coding sequence

Length: 4317 bp    Location: 5241992..5368557   Strand: +
>XM_004855351.1
ATGGATTTCTCTTTCTCTTTCATGCAAGGGATCATGGGAAACACAATTCAGCAACCACCTCAACTCATTGACTCCGCCAACATCCGTCAGGAGGATGCCTTTGATAACAGCAGTGACATTGTTGAAGATGGTGGCCAGACACCGTATGAAGCTACCTTGCAGCAAGGCTTTCAGTACCCACCTACAACAGAAGACCTTCCTCCACTTACAAATGGCTACCCACCATCAATCAGCATGTATGAAACTCAAACCAAATACCAGTCATATAATCAGTATCCCAATGGGTCAGCCAATGGCTTTGGTGCAGTTAGAAACTTTAGCCCCACTGACTATTACCATTCAGAAATTCCAAATACAAGACCACATGAAATTCTAGAAAAACCTTCCCCTCCGCAGCCACCACCTCCTCTTTCGGTACCACAAACTGTGATTCCAAAGAAGACTGGCTCACCTGAAATTAAACTAAAAATAACCAAAACTATCCAGAATGGCAGGGAATTGTTCGAGTCTTCCCTTTGTGGAGACCTTTTAAATGAAGTACAGGCAACTGAACACATAAAGTCAAAGCATGAAAGCAGAAAAGAAAAAAGGAAAAAAAGCAACAAGCATGACTCATCTAGATCTGAAGAGCGCAAGTCACACAAAATCCCCAAATTAGAATCAGAGGAGCAAAATAGACCAAATGAGAGGGTGGACTCCACACCAGAAAAGCCAAGAGAAGAGCCAGTGCTCAAAGACGCCATCCCGGTTCAGCCAATACTGTCCTCTGCCCCAACCACAGAAGTAACTACTGGTGTTAAGTTCCAGGTTGGCGATCTTGTTTGGTCCAAGGTGGGAACCTATCCCTGGTGGCCTTGTATGGTTTCAAGTGATCCCCAGCTCGAGGTTCATACCAAAATTAACACAAGAGGTGCCCGGGAATATCATGTCCAATTTTTTAGCAACCAGCCAGAGAGGGCATGGGTTCATGAAAAGCGGGTACGGGAGTATAAAGGTCATAAACAGTATGAAGAATTACTGGCTGAAGCAACCAAACAAGCCAGCAATCACTCTGAAAAACAAAAGATCCGGAAACCCCGACCTCAAAGAGAACGTGCCCAGTGGGATATTGGCATTGCCCATGCAGAAAAAGCATTGAAAATGACTCGAGAAGAAAGAATAGAACAGTATACTTTCATCTATATTGATAAACAGCCTGAAGAGGCTTTATCCCAAACAAAAAAGAATCCTATCTCCAAGACCGAAGTTAAAAAACCCCGAAGACCAAGATCTGTGTTGCATATTCAACCAGAACAGACCAATTCAGGGGAGGTGGCCTCTTCTCAGTCAAGTACTGACCTTCGGAGACACAGTCAGAGGCGGCACACAAGTGTGGAAGAGGAAGAACCACCCCCTGTTAAAATAGCCTGGAAAACAGCAGCCGCAAGGAAATCCTTACCAGCTTCCATTACAATGCACAAAGGGAGCCTGGATTTGCAGAAGTGTAACATGTCCCCAGTTGTAAAAATTGAACAAGTGTTTGCTCTTCAAAACGCAACAGGAGATGGGAAATTTATCGATCAGTTTGTTTATTCAACGAAGGGAATTGGTAACAAAACGGAAATAAGTGTCAGGGGGCAAGACAGGCTTATAATTTCCTCACCAAACCAGAGAAATGAAAAGCCAACACAGAATATATCATCTCCTGAAGCAACATCTGGTCCTACAGGCTCAGTAGAAAAGAAGCAACAGAGGAGATCAATTAGGACTCGTTCTGAATCAGAGAAGTCTGCTGAAGCTGTGCCAAAGAAGAAGATCAAAAAGGAGCAGGTTGAAACAGTTCCTCAGGCTACAGTGAAGATTGGATTACAGAAAGGTGCCAGCGAGATTTCAGATTCCTGTAAACCTCTAAAGAAAAGGAGTCGTGCCTCAACTGATGTAGAAATGACTGGTTCAGCCTACAGAGACACATCTGACTCCGACTCTAGAGGATTGAGTGATCTGCAGGTAGGCTTTGGAAAACAAATAGATAGCCCGTCAGCTGCTGCAGATGCAGATATTTCTGATGTACAGTCCATGGATTCAAGTTTGTCCAGAAGAGGCATTGGAATGAGTAGAAAGGACACTGTGTGTCAGATCTGCGAAAGGTCTGGTGACTCTCTGGTTCCTTGTGAGGGAGAGTGCTGCAAACACTTTCACTTGGAGTGCCTGGGATTGACATCAGTCCCTGATGGAAAGTTCATGTGCAGAGAGTGTAAAACTGGGCAGCATCCATGTTTTTCATGTAAGGTACCTGGTAAAGATGTGAAGCGTTGTTCTGTTGGTGCTTGTGGGAAGTTTTATCATGAAGCCTGTGTCCGCAAATTCTCCACTGCCATCTTTGAATCAAAAGGATTCCGCTGTCCCCAGCACTGCTGCTCTGCCTGCTCTATGGAGAAAGATATCTACAAAGCAAGTAAAGGACGCATGATGAGATGTTTGAGGTGTCCGGTTGCCTATCACTCTGCAGATGCTTGTATTGCTGCAGGAAGCTTATTTGTGTCCTCCTACATTCTCATCTGTAGCAATCATTCTAAGCGGAGCAGTAATTCTTCTTCTGCTGTAAATGTAGGCTTTTGTTTCGTTTGTGCCAGAGGGCTGATAGTTCAGGACCATTCAGACCCCATGTTCAGTTCATATGCCTATAAGTCCCACTACCTACTGAATGAATCAAATCGTGCTGAGTTGATGAAATTACCTATGATTCCTTCTTCGTCAGCTTCCAAAAAGAAATGTGAGAAAGGTGGAAGATTGCTCTGCTGTGAGTCGTGCCCAGCTTCCTTCCACCCGGAATGCCTGAACATAGATACTCCAGAAGGCCGCTGGAACTGTAATGACTGTAAAGCTGGCAAGAAACTTCATTACAAGCAGATTGTTTGGGTCAAACTGGGAAATTACAGATGGTGGCCTGCAGAGATCTGCAATCCCAGGTCTGTACCCCTGAACATCCAGGGCCTTAAACATGACTTAGGAGACTTCCCTGTATTCTTCTTTGGTTCTCATGACTACTATTGGGTGCACCAAGGCAGAGTGTTCCCGTATGTTGAAGGAGACAAAAGCTTTGCTGAGGGGCAGACTAGTATTAACAAGACCTTCAAGAAAGCACTGGAAGAAGCTGCAAAACGTTTCCAAGAACTGAAAGCACAAAGAGAAAGTAAAGAAGCATTAGAGGTTGAAAAAAACTCAAGAAAACCTCCTCCTTACAAACACATCAAAGCTAACAAAGTAATAGGGAAGGTTCAGATCCACGTTGCTGATCTGTCAGAGATCCCCCGCTGTAACTGCAAGCCTGCTGATGAGAACCCTTGTGGCTTGGAATCAGAGTGTCTGAACAGAATGTTGCAATACGAGTGTCACCCGCAGGTGTGCCCAGCTGGAGACCGTTGTCAGAACCAGTGCTTTACAAAGAGGCTCTATCCAGATGCAGAGATCATCAAAACAGAGAGGAGAGGCTGGGGCCTCAGGACCAAAAGGAGCATCAAGAAGGGTGAATTTGTAAATGAATATGTTGGTGAATTAATTGATGAAGAAGAATGCAGACTTCGAATCAAGCGAGCTCACGAGAACAGTGTAACTAATTTTTATATGTTAACTGTTACCAAGGACCGTATAATTGATGCTGGCCCAAAAGGAAATTATTCTCGTTTTATGAACCACAGTTGTAATCCAAATTGTGAAACACAGAAATGGACAGTGAATGGAGATGTTCGAGTTGGACTCTTCGCTCTGTGTGACATCCCTGCAGGCATGGAGTTGACATTTAATTACAACTTAGACTGTCTGGGCAACGGAAGAACAGAGTGTCACTGCGGGGCAGACAACTGCAGTGGCTTTCTTGGAGTTCGGCCAAAGTCGGCATGTGCATCCACAGCTGAAGAGAAGGCAAAAAATGCCAAGTTAAAGCAGAAAAGACGAAAAATCAAAACAGAACCAAAGCAGATGCATGAAGATTATTGTTTTCAGTGTGGAGATGGTGGAGAGCTAGTCATGTGTGACAAAAAAGACTGTCCCAAAGCATACCACCTCCTATGCCTTAACTTGACTCAGCCACCATATGGAAAGTGGGAGTGCCCGTGGCACCAGTGCGACGCATGCAGCAGTGCAGCTGTCTCCTTCTGCGAGTTTTGTCCACGTTCATTTTGCAAGGATCATGGAAAGGGGGCTCTGGTGGCCTCTGCACTGGAGGGCCGGCTCTGCTGCTCTGAGCACGACCCCTTGTCACCAGTGTCACCAGAGTACTGGAGCAAGGTCAGATGTAAATGGGAATCCCAGGATCGCAAAGAAGAGGCAAAGGAATAA

Related Sequences

XP_004855408.1 Protein

Whsc1l1 PREDICTED: histone-lysine N-methyltransferase NSD3 isoform X3 [Heterocephalus glaber]

Length: 1438 aa      View alignments
>XP_004855408.1
MDFSFSFMQGIMGNTIQQPPQLIDSANIRQEDAFDNSSDIVEDGGQTPYEATLQQGFQYPPTTEDLPPLTNGYPPSISMYETQTKYQSYNQYPNGSANGFGAVRNFSPTDYYHSEIPNTRPHEILEKPSPPQPPPPLSVPQTVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQATEHIKSKHESRKEKRKKSNKHDSSRSEERKSHKIPKLESEEQNRPNERVDSTPEKPREEPVLKDAIPVQPILSSAPTTEVTTGVKFQVGDLVWSKVGTYPWWPCMVSSDPQLEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGHKQYEELLAEATKQASNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDKQPEEALSQTKKNPISKTEVKKPRRPRSVLHIQPEQTNSGEVASSQSSTDLRRHSQRRHTSVEEEEPPPVKIAWKTAAARKSLPASITMHKGSLDLQKCNMSPVVKIEQVFALQNATGDGKFIDQFVYSTKGIGNKTEISVRGQDRLIISSPNQRNEKPTQNISSPEATSGPTGSVEKKQQRRSIRTRSESEKSAEAVPKKKIKKEQVETVPQATVKIGLQKGASEISDSCKPLKKRSRASTDVEMTGSAYRDTSDSDSRGLSDLQVGFGKQIDSPSAAADADISDVQSMDSSLSRRGIGMSRKDTVCQICERSGDSLVPCEGECCKHFHLECLGLTSVPDGKFMCRECKTGQHPCFSCKVPGKDVKRCSVGACGKFYHEACVRKFSTAIFESKGFRCPQHCCSACSMEKDIYKASKGRMMRCLRCPVAYHSADACIAAGSLFVSSYILICSNHSKRSSNSSSAVNVGFCFVCARGLIVQDHSDPMFSSYAYKSHYLLNESNRAELMKLPMIPSSSASKKKCEKGGRLLCCESCPASFHPECLNIDTPEGRWNCNDCKAGKKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWVHQGRVFPYVEGDKSFAEGQTSINKTFKKALEEAAKRFQELKAQRESKEALEVEKNSRKPPPYKHIKANKVIGKVQIHVADLSEIPRCNCKPADENPCGLESECLNRMLQYECHPQVCPAGDRCQNQCFTKRLYPDAEIIKTERRGWGLRTKRSIKKGEFVNEYVGELIDEEECRLRIKRAHENSVTNFYMLTVTKDRIIDAGPKGNYSRFMNHSCNPNCETQKWTVNGDVRVGLFALCDIPAGMELTFNYNLDCLGNGRTECHCGADNCSGFLGVRPKSACASTAEEKAKNAKLKQKRRKIKTEPKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDACSSAAVSFCEFCPRSFCKDHGKGALVASALEGRLCCSEHDPLSPVSPEYWSKVRCKWESQDRKEEAKE