Details from NCBI annotation

Gene Symbol Hmgxb3
Gene Name HMG box domain containing 3, transcript variant X2
Entrez Gene ID 101720576

Database interlinks

Part of NW_004624774.1 (Scaffold)

For more information consult the page for NW_004624774.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMGXB3 ENSCPOG00000002607 (Guinea pig)

Gene Details

HMG box domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002369, Guinea pig)

Protein Percentage 93.83%
CDS Percentage 92.55%
Ka/Ks Ratio 0.14754 (Ka = 0.0317, Ks = 0.2146)

HMGXB3 ENSG00000113716 (Human)

Gene Details

HMG box domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000421917, Human)

Protein Percentage 90.74%
CDS Percentage 90.4%
Ka/Ks Ratio 0.18184 (Ka = 0.049, Ks = 0.2693)

Hmgxb3 ENSMUSG00000024622 (Mouse)

Gene Details

HMG box domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000089498, Mouse)

Protein Percentage 88.29%
CDS Percentage 86.79%
Ka/Ks Ratio 0.14351 (Ka = 0.0625, Ks = 0.4357)

Hmgxb3 ENSRNOG00000018132 (Rat)

Gene Details

HMG box domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024704, Rat)

Protein Percentage 88.97%
CDS Percentage 87.22%
Ka/Ks Ratio 0.1441 (Ka = 0.0597, Ks = 0.4146)

Genome Location

Sequence Coding sequence

Length: 3861 bp    Location: 9292164..9362816   Strand: +
>XM_004854411.1
ATGGATGCATCATATGATGGTACTGAGGTAACTGTTGTGATGGAGGAAATTAAGGAAGTCTACTGTTATACTTCCCCTGGGCCACCCAAGAAGAAGAAAAAGTATAAAATACATGGAGAAAAGGCCAAGAAACCCAGGTCTGCTTACCTTTTATACTACTACGACATCTACTTGAAAGTACAGCAGGAGCTCCCCCACCTTCCGCAGTCTGAGATCAATAAGAAGATTAGTGAGAGTTGGAGGCTTCTCAGTGTGGCCGAGAGGAGTTACTACTTGGAGAAAGCCAAACTAGAAAAAGAAGGTTTGGATCCTAACGCTAAGCTATCTACAGTGACTGCCGTGGTTCCGGACATCCCAGGTTTCCGAAAGATCCTCCCCCGCTCAGAATACATCATCATCCCCAAGAGCACCCTGCAGGAGGAACAGAGCTGTGCGCAGCTAGAGCTGTGTGTAGCTCAGAACCAGATGTCCCCTAAAGGATCGTCTCTTGTATCCAACACTGCCCCAGAGACAGTGCCCAGCCATGTGGGCGTAGCAGAGCAATGCCTGGCTGAGGAGACTCTGGCTGAGGAGGTGGGAGCCCTTGCTCAGCCAGGTGCTGTACAGGAGATTGCCACCTCAGAGATCCTCACCCAGGATGTACTCCTGGAGGAGGCTTCTTTGGAGGTAGGGGAGAGCCACCAGCCTTACCAGACAAACCTAGTAATTGAAGAGACCTTACTGAACGGCTCATCAGAACTCCCCACTGGAAATCTGGCTGTGCCCCGCACCCAGGTTGGGGAGAGTGTGTCAGTGGTGACAGTCATGAGGGATTCCAATGAGAGTAGCTCCTGTGCACCAACTACACAGTTCATCATGTTGCCTGTGCCTACCTACTCCGTTGTGGAAAATCCCTCCCCCATCAAATTGACAACTACTTATACCCGCCGGGGCCATGGGACTTGCACCAGTCCAGGTTGTTCCTTTACGTATGTCACCAGGCATAAACCACCTAAGTGCCCAACCTGTGGTAACTTCCTAGGAGGAAAATGGATCCCAAAGGAAAAGCCAGCCAGAGTCAAAGTGGAATTGGCTTCAGGTGTCTCCTCCAAAGGTTCTGTGATTAAAAGAAATCAGCAGCCTGAACAAAATTCCTCTAAGGAAAATGCCTGCAAACTGACTTTAGAGAATTCAGAAGCTGTAAGCCAGCTCTTAAATGTAGCTCCTCCAAGAGAAGTGGGTGACGAGAATGAGTGGGAGGAAGTAATAGTCTCGGATGCCCATATTTTGGTTAAAGAAGCGCCTGGCATCTGTGGTACAGCAGTCACTAAGATGTCAGTCGTCAAGCCTGAAGTCACCCTGGGGACAACTGAGAATGACAGTTCTGGACTAGAAATACCGCCACCACCAGCCGAGGGGACCAGCACCTCCACCCAACTCCCTGGTCCTAAAAAGCCTACAGGAGTTGATCTACTCACCACTGGACCCAGAACCCCAGAGCTTAAAGGCAGAGCGAGGGGCAAGCCCTCATTACTGGCTGCAGCAAGACCCATGAGAGCGATTCTCCCAGCCCCATCTAATGTGGGGCGAGGCAGCAGCATGGGACTGCCCAGGGCCAGGCAGGCCTTTTCCCTGAGTGATAAGACTTCCTCTGTGAGGACTTGTGGCCTAAAGCCAAGCACACTGAAGCAGCTGGGCCAGCCTGTACAACAGCCATCTAGCACTGGCGAGGTGAAGCTACCAAGTGGCCCAAACAACAGGACCTCTCAGGTGAAGGTTGTAGAGGTCAAGCCTGATATGTTTCCTCCATATAAGTACAGCTGCACTGTCACCCTGGATTTGGGCCTGGCCACATCAAGAGGCAGGGGAAAATGCAAGAATCCCTCTTGTAGCTATGTCTACACCAACCGGCACAAACCTCGGATTTGTCCCAGCTGTGGTTTTAATCTTGCCAAAGACCGGACTGAGAAAACCACCAAGACTATTGAAATGAGTTCTCCACTCCCAGATGGGCTAAGTGCCACAGAGCCCCTGAGTGCAACCCAGAGGGAGATTCAGCGCCAGTCCACACTGCAGCTGCTGCGCAAAGTCCTGCAGATTCCTGAGAATGAGTCTGAACTGGCCGAAGTCTTCACCTTGATTCATGAACTCAATAGCTCTCGACTTATCCTGTCCAACGTGAGTGAGGAGACAGTCACCATTGAGCAAACCTCTTGGTCGAATTATTATGAGTCCCCATCCATGCAGTGCCTTCTCTGCAGCAGCCCATTATTCAAAGGGGGACAAAACTCTCTGGCTGGGCCCCAGGAGTGTTGGCTGCTGACAGCTAACCGGCTGCAGGTGGTGACTGCTCAGGTGAAGATGTGTCTGAACCCCCATTGTCTGGCCCTGCACAGCTTCATGGACATCTACACAGGTCTCTTTAATGTGGGGAACAAGCTGCTAGTAAGCCTGGACTTGCTTTTTGCAATCCGAAACCAGATCAAGCTGGGAGAGGACCCCAGAGTATCAGTCAGTGTTGTGCTGAAGTCAGTGCAGGAGCAGACAGAGAAGACTCTTATCTCAGAGGAGCTGAGCCAGCTGCAGGAGCTGCTGTGCAACGGCTACTGGGCTTTCGAGTGCCTCACTGTCCGAGACTACAATGACATGATTTGTGGCATCTGTGGTGTGGCCCCTAAAGTAGAAATGGCTCAGAGGAGTGAAGAGAATGTGCTAGCACTGAAAAGTGTGGAGTTCACCTGGCCTGAATTCCTGGGTTCCAGTGAGGTGAATGTGGAGGACTTTTGGGCCACAATGGAGACTGAGGTTATTGAGCAGGTGGCATTCCCTGCCAGCATCCCTATCACCAAATTTGATGCCTCTGTTATTGCCCCCTTCTTCCCTCCACTCATGAGAGGAGCTGTGGTCGTCAACACTGAGAAAGACAAAAATCTGGTTGTGCAGCCAGTACCTGGCAATGGCAGTGTCTTGGTGAGGCTACTCCAGGAAGGCACCTGCAAGCTTGAGGAAATTGGCTCCTATAGTGAAGAGGAGCTGCAGCATCTGCTGGGGCAGTGTGACATCCCTTTCAAAGCCGAAGACTGCAGAGATCAGCTCTGTTTCTCTTTATTGGCCCTCTATGAATCTGTACAGAATGGAGCCAGAGCTAGACAGCCCCCACCGCATCTCACTGGGGGTAAAATCTTCAAAGTGTGCCCCCATCAGGTGGTTTGCGGCTCCAAGTATCTTGTCCGAGGTGAGAGTGCCCGTGACCATGTGGATCTGCTTGCCTCTTCCCGCCACTGGCCTCCTGTCTATGTGGTAGACATGGCCACACCTGTGGCCCTGTGTGCTGACCTCTGCTACCCAGAGCTGACCAGCCAAATGTGGGGGAAGAACCAGGGCTGTTTCTCTAGCCCTACCGAGCCACCTATGACCGTGTCCTGCCCCGAGCTTTTGGACCAGCATAATTCCGTGGACACGACAGAGGCTGAACATGCTGTCCAACACCCAGTCACCAAGAGTGCTACTCGGCGCATTGTCCATGCAGGCACACAGCCCAGTCCTGGTGACCCCAGTGCTGGGCACCACTCCTTATCCCTGTGCCCTGAATTGGCACCTTATGCATCTATTCTAGCCTCCATTATGGACAGCAAATCAAATAATGTCCGCCAACGTCCCATTGCCTTTGACAACGCCACCCACTATTACCTCTACAACCGCCTCATGGACTTCCTCACCAGTCGTGAGATTGTCAACAGGCAGATCCATGACATTGTACAGAACTGCCAGCCTGGCGAGGTGGTCATTCGTGACACCCTCTACCGCCTTGGGGTTGCTCAGATCAAGACAGAGCCTGAGGAAGAGGGTGAGGAAGAGGAGGCGGCCACAGTGGCAGAATAA

Related Sequences

XP_004854468.1 Protein

Hmgxb3 PREDICTED: HMG domain-containing protein 3 isoform X2 [Heterocephalus glaber]

Length: 1286 aa      View alignments
>XP_004854468.1
MDASYDGTEVTVVMEEIKEVYCYTSPGPPKKKKKYKIHGEKAKKPRSAYLLYYYDIYLKVQQELPHLPQSEINKKISESWRLLSVAERSYYLEKAKLEKEGLDPNAKLSTVTAVVPDIPGFRKILPRSEYIIIPKSTLQEEQSCAQLELCVAQNQMSPKGSSLVSNTAPETVPSHVGVAEQCLAEETLAEEVGALAQPGAVQEIATSEILTQDVLLEEASLEVGESHQPYQTNLVIEETLLNGSSELPTGNLAVPRTQVGESVSVVTVMRDSNESSSCAPTTQFIMLPVPTYSVVENPSPIKLTTTYTRRGHGTCTSPGCSFTYVTRHKPPKCPTCGNFLGGKWIPKEKPARVKVELASGVSSKGSVIKRNQQPEQNSSKENACKLTLENSEAVSQLLNVAPPREVGDENEWEEVIVSDAHILVKEAPGICGTAVTKMSVVKPEVTLGTTENDSSGLEIPPPPAEGTSTSTQLPGPKKPTGVDLLTTGPRTPELKGRARGKPSLLAAARPMRAILPAPSNVGRGSSMGLPRARQAFSLSDKTSSVRTCGLKPSTLKQLGQPVQQPSSTGEVKLPSGPNNRTSQVKVVEVKPDMFPPYKYSCTVTLDLGLATSRGRGKCKNPSCSYVYTNRHKPRICPSCGFNLAKDRTEKTTKTIEMSSPLPDGLSATEPLSATQREIQRQSTLQLLRKVLQIPENESELAEVFTLIHELNSSRLILSNVSEETVTIEQTSWSNYYESPSMQCLLCSSPLFKGGQNSLAGPQECWLLTANRLQVVTAQVKMCLNPHCLALHSFMDIYTGLFNVGNKLLVSLDLLFAIRNQIKLGEDPRVSVSVVLKSVQEQTEKTLISEELSQLQELLCNGYWAFECLTVRDYNDMICGICGVAPKVEMAQRSEENVLALKSVEFTWPEFLGSSEVNVEDFWATMETEVIEQVAFPASIPITKFDASVIAPFFPPLMRGAVVVNTEKDKNLVVQPVPGNGSVLVRLLQEGTCKLEEIGSYSEEELQHLLGQCDIPFKAEDCRDQLCFSLLALYESVQNGARARQPPPHLTGGKIFKVCPHQVVCGSKYLVRGESARDHVDLLASSRHWPPVYVVDMATPVALCADLCYPELTSQMWGKNQGCFSSPTEPPMTVSCPELLDQHNSVDTTEAEHAVQHPVTKSATRRIVHAGTQPSPGDPSAGHHSLSLCPELAPYASILASIMDSKSNNVRQRPIAFDNATHYYLYNRLMDFLTSREIVNRQIHDIVQNCQPGEVVIRDTLYRLGVAQIKTEPEEEGEEEEAATVAE