Details from NCBI annotation

Gene Symbol Cd44
Gene Name CD44 molecule (Indian blood group), transcript variant X1
Entrez Gene ID 101702081

Database interlinks

Part of NW_004624767.1 (Scaffold)

For more information consult the page for NW_004624767.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CD44 ENSCPOG00000007792 (Guinea pig)

Gene Details

CD44 molecule (Indian blood group)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007016, Guinea pig)

Protein Percentage 84.6%
CDS Percentage 88.82%
Ka/Ks Ratio 0.41663 (Ka = 0.0923, Ks = 0.2216)

CD44 ENSG00000026508 (Human)

Gene Details

CD44 molecule (Indian blood group)

External Links

Gene Match (Ensembl Protein ID: ENSP00000398632, Human)

Protein Percentage 77.42%
CDS Percentage 84.42%
Ka/Ks Ratio 0.41964 (Ka = 0.1363, Ks = 0.3249)

Cd44 ENSMUSG00000005087 (Mouse)

Gene Details

CD44 antigen

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000005218, Mouse)

Protein Percentage 72.94%
CDS Percentage 80.61%
Ka/Ks Ratio 0.37785 (Ka = 0.1693, Ks = 0.448)

Cd44 ENSRNOG00000006094 (Rat)

Gene Details

Cd44 molecule (Cd44), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009000, Rat)

Protein Percentage 75.83%
CDS Percentage 82.59%
Ka/Ks Ratio 0.35902 (Ka = 0.1455, Ks = 0.4053)

Genome Location

Sequence Coding sequence

Length: 2094 bp    Location: 12024974..11940636   Strand: -
>XM_004852041.1
ATGGACAAGTTCTGGTGGCGCGCAGCCTGGGGACTCTGCCTCCTGCAGCTGAGCCTGGCCCAGGTCCACATCGATCTGAACATCACATGCCGCTATGCAGGTGTATTCCACGTGGAGAAAAATGGACGCTACAGCATCTCTCGGACGGAGGCAGCCGACCTCTGCAAGGCTTTCAACACCACCCTGCCCACCATGGCCCAGATGGAGCTGGCACTCAGCAAGGGCTTTGAGACCTGCAGGTACGGGTTCATAGAAGGGCATGTGGTGATCCCCCGGATCAACCCCAACGCCATCTGTGCAGCCAACAACACAGGGGTATACATCCTCCCCTCCAACACCTCCCACTACGACACGTACTGCTTCAACGCATCAGCTCCTCTCGATGAAGAAGATTGTACATCAGTCACAGACCTGCCCAATTCCTTTGAAGGACAAGTTACCATAAGCATTGTCAATCGTGATGGCACCCGCTACACCAAGAAAGGAGAATACAGAACAAACCCAGAAGACATCAACCCCATCAACCCTTTGGATGAGGATGTGAGCAGTGGATCCTCCAGTGAAAGGAGCACTTTGGGAGGTTACAGCATCTTCCATACCCACCTTCCAACCACACACCCAACCTCTGATCTGGCGAACACCGGAGTCTATGGGAGTACCAGTACGGATTCAAATACCATGTCAAAAGGCTGGGCCCCCAGTGAAGAAAATGAAGAGGACATAGACATACACCTCAGTTTTTCTGGATCAGGCATTGATGATGATGAAGATTTTATCTCCAGTACCATTTCAACCACTCCACGAGTTTCTGACCACACAAAACAGTTCCAGGATTGGATCCAATGGAAGCCAAGCCATTCAAACACAGAAGTACTACTTCAGACAACCACAAGGATGACTGATGTAGACAGAAATGGCACCAGTGTTCATGGAGAAGACTGGACCCAGGATGCACAGCCTCCTGTCATTCACCATGAGCATCAGGACTCAGAGGAGACCCCACATTCTACGAGTACAACCTGGGCAGCTCCTAGTAGCACAACAGAAGAAACAGCTACCCAGAAGGAACAGTGGTTTGAGAGAGAATGGCATGGGGAATATCCCCAAACACCAAGAGAAGACTCTGATTCAACCACAGGGACAACTGTCTCAGCTCACAGCAGCCGTCCAAGTCAAAGAATGACAACACAGAGTCAAGAGGACATTTCCTGGACTGAGTTCTTCGACCCAATCTCACATCCAATGGGAAGAGGTCATCAGACAGAAAGAAGGATGGATGTGGACACCAGTCATAGTGCATCAGTTCAGCCTACTGCAGATCCAAACACAGATTTGGTGGAAGACTTGGACAGGACAAGACCTCTTTCAGTGACAACTCAGCAGAGCGATTCTCAGAGCTTCTCTACCTCACATGGAGAATTGGAAGAAGATAAAGACCATCCAACAACTTCTACTCTGACATCTGGCAATAGAGATCCTGCCAAAGGGGGCAGAAGAGGTGCAAATCTTCCTGAAGACTCAACTACTTCACTGGAAGGTTATACCCCTCATTACCCAGAAACAAAAGAAAACAGGACCCTCATCCCAGTGACCCCTGCTAATACTGGGGCCATTGGAGAAACTGAAGTTACTGTTGTTGAAGAGCCTAACTCTGATGTTGATCACTCCTTACCAGGAGATCAAGACACGTTCATAGACCCCAACGAACGCTCCCATACTACTAGTGATTCGAAATCTGATGGACACTCAAGTGGGACTCGAGCTGGAGCAAGCACACCCTCTCCTCCTCAAAGGAGACCCCAAATTCCAGAATGGCTCATCATCTTGGCATCGCTCTTGGCCCTGGCTTTGATTCTTGCTGTTTGCATCGCTGTCAACAGTCGGAGAAGGTGTGGGCAGAAGAAAAAGTTGGTGATCAACAATGGCAATGGAGCAGTGGAGGACAGAAAGCCAAGTGGACTCAACGGAGAGGCCAGCAAGTCTCAGGAAATGGTGCATTTGGTGAACAAGGAACCATCAGAGACCCCAGACCAGTTTATGACAGCCGATGAGACACGGAACCTGCAAAATGTGGACATGAAGATTGGGGTGTAA

Related Sequences

XP_004852098.1 Protein

Cd44 PREDICTED: CD44 antigen isoform X1 [Heterocephalus glaber]

Length: 697 aa      View alignments
>XP_004852098.1
MDKFWWRAAWGLCLLQLSLAQVHIDLNITCRYAGVFHVEKNGRYSISRTEAADLCKAFNTTLPTMAQMELALSKGFETCRYGFIEGHVVIPRINPNAICAANNTGVYILPSNTSHYDTYCFNASAPLDEEDCTSVTDLPNSFEGQVTISIVNRDGTRYTKKGEYRTNPEDINPINPLDEDVSSGSSSERSTLGGYSIFHTHLPTTHPTSDLANTGVYGSTSTDSNTMSKGWAPSEENEEDIDIHLSFSGSGIDDDEDFISSTISTTPRVSDHTKQFQDWIQWKPSHSNTEVLLQTTTRMTDVDRNGTSVHGEDWTQDAQPPVIHHEHQDSEETPHSTSTTWAAPSSTTEETATQKEQWFEREWHGEYPQTPREDSDSTTGTTVSAHSSRPSQRMTTQSQEDISWTEFFDPISHPMGRGHQTERRMDVDTSHSASVQPTADPNTDLVEDLDRTRPLSVTTQQSDSQSFSTSHGELEEDKDHPTTSTLTSGNRDPAKGGRRGANLPEDSTTSLEGYTPHYPETKENRTLIPVTPANTGAIGETEVTVVEEPNSDVDHSLPGDQDTFIDPNERSHTTSDSKSDGHSSGTRAGASTPSPPQRRPQIPEWLIILASLLALALILAVCIAVNSRRRCGQKKKLVINNGNGAVEDRKPSGLNGEASKSQEMVHLVNKEPSETPDQFMTADETRNLQNVDMKIGV