Details from NCBI annotation

Gene Symbol Scgb1c1
Gene Name secretoglobin, family 1C, member 1
Entrez Gene ID 101699831

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCGB1C1 ENSCPOG00000015079 (Guinea pig)

Gene Details

secretoglobin, family 1C, member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013593, Guinea pig)

Protein Percentage 82.11%
CDS Percentage 87.72%
Ka/Ks Ratio 0.39258 (Ka = 0.1072, Ks = 0.273)

SCGB1C1 ENSG00000188076 (Human)

Gene Details

secretoglobin, family 1C, member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000344545, Human)

Protein Percentage 71.58%
CDS Percentage 78.6%
Ka/Ks Ratio 0.19842 (Ka = 0.1668, Ks = 0.8409)

Scgb1c1 ENSMUSG00000038801 (Mouse)

Gene Details

secretoglobin, family 1C, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000048722, Mouse)

Protein Percentage 70.53%
CDS Percentage 74.39%
Ka/Ks Ratio 0.21354 (Ka = 0.2183, Ks = 1.0222)

Scgb1c1 ENSRNOG00000012847 (Rat)

Gene Details

secretoglobin, family 1C, member 1 (Scgb1c1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017137, Rat)

Protein Percentage 72.63%
CDS Percentage 77.19%
Ka/Ks Ratio 0.25787 (Ka = 0.1967, Ks = 0.7629)

Genome Location

Sequence Coding sequence

Length: 288 bp    Location: 22251269..22250131   Strand: -
>XM_004851768.1
ATGAAGGGGAGCGGCAGCCTCCTGCTAGTGACCCTCGCTGTGCTCTGTGCCTGTGGTAAGTCTGGGCCAGAGGACAACAATGAATTCTTCATGGAATTCCTCCAAACACTGCTGGTTGGAAGCCCAGAGGAGCTCTATGATGGGCCGCTTGGCAAGTACAATGTCAACCAGGGTGCCAAGGAGGCGCTGACAGAGCTCAAGTCCTGCATTGATGGTCTGCAGCCCACGCACAAGGCGGATCTGGTCGAGTTGCTGGAGCAAGTGCTGGGCAGTGAGGATGACGCCTGA

Related Sequences

XP_004851825.1 Protein

Scgb1c1 PREDICTED: secretoglobin family 1C member 1 [Heterocephalus glaber]

Length: 95 aa      View alignments
>XP_004851825.1
MKGSGSLLLVTLAVLCACGKSGPEDNNEFFMEFLQTLLVGSPEELYDGPLGKYNVNQGAKEALTELKSCIDGLQPTHKADLVELLEQVLGSEDDA