Details from NCBI annotation

Gene Symbol Psmd13
Gene Name proteasome (prosome, macropain) 26S subunit, non-ATPase, 13, transcript variant X2
Entrez Gene ID 101698107

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMD13 ENSCPOG00000003592 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003243, Guinea pig)

Protein Percentage 97.16%
CDS Percentage 93.85%
Ka/Ks Ratio 0.08452 (Ka = 0.0164, Ks = 0.1936)

PSMD13 ENSG00000185627 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000396937, Human)

Protein Percentage 88.56%
CDS Percentage 86.17%
Ka/Ks Ratio 0.20849 (Ka = 0.0876, Ks = 0.4202)

Psmd13 ENSMUSG00000025487 (Mouse)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026560, Mouse)

Protein Percentage 96.81%
CDS Percentage 90.78%
Ka/Ks Ratio 0.037 (Ka = 0.0159, Ks = 0.4286)

Psmd13 ENSRNOG00000014109 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 (Psmd13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019642, Rat)

Protein Percentage 97.07%
CDS Percentage 90.43%
Ka/Ks Ratio 0.034 (Ka = 0.0149, Ks = 0.4391)

Genome Location

Sequence Coding sequence

Length: 1131 bp    Location: 22199633..22188064   Strand: -
>XM_004851764.1
ATGAAGGATGTACCGGGCTTCTTACAGCAGAGCCAGAGCTCCGGGCCCGGGCAGGCCGCCGTGTGGCACCGTCTGGAAGAGCTCTACACAAAGAAGTTATGGCATCAACTGACACTTCAGGTCCTTGATTTTGTACAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGCTTTATGAAAACTTCATCAGTGAATTTGAACACAGAGTGAACCCTTTGTCCCTGGTAGAAATAATTCTTCATGTGGTTAGACAGATGACTGATCCCAATGTGGCTCTTACTTTTCTGGAAAAGACTCGCGAGAAGGTGAAAAGTAGTGATGAGGCAGTGATCCTGTGTAAAACAGCAATCGGAGCTCTAAAATTAAACATCGGGGATCTACAGGTTACAAAGGAAACGATTGAAGACGTTGAAGAGATGCTCCACAACCTCCCCGGCGTGACATCGGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATTGGGAACCATGCTTCCTACTACAAAGATGCTCTGCGGTTTCTGGGCTGTGTTGACATCAAAGATCTACCAGTTTCAGAGCAGCAGGAGAGAGCCTTTACACTGGGGCTTGCAGGACTTCTCGGCGAGGGAGTTTTTAACTTTGGAGAGCTGCTCATGCACCCTGTGCTTGAGTCACTGCGGGCCACCGACCGGCAATGGCTGATTGACACCCTCTATGCCTTCAATAGTGGCGATGTGGACAGGTTCCAGACTCTGAAGACTGCCTGGGGCCACCAGCCTGACTTAGCTGCCAACGAAACCCAGCTTCTGCGGAAGATTCAGTTGTTGTGTCTAATGGAGATGACTTTCACACGACCTGCCAACCACAGACAGCTCACTTTTGAAGAAATTGCCAAAAGTGCCAAAATCACAGTGAACGAGGTAGAGCTGCTGGTGATGAAGGCACTCTCGGTGGGACTGGTGAGAGGCAGCATAGATGAGGTCGACAAGCGAGTCCACATGACCTGGGTGCAGCCCCGCGTGCTAGATTTGCAGCAGATCAAGGGGATGAAGGACCGCCTGGAGTTTTGGTGCACAGATGTGAAGAGCATGGAGATGCTGGTGGAGCACCAGGCCCATGACATCCTCACCTAG

Related Sequences

XP_004851821.1 Protein

Psmd13 PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 isoform X2 [Heterocephalus glaber]

Length: 376 aa      View alignments
>XP_004851821.1
MKDVPGFLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLHNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRATDRQWLIDTLYAFNSGDVDRFQTLKTAWGHQPDLAANETQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVRGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVKSMEMLVEHQAHDILT