Details from NCBI annotation

Gene Symbol Sct
Gene Name secretin, transcript variant X2
Entrez Gene ID 101709391

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SCT ENSCPOG00000026934 (Guinea pig)

Gene Details

Secretin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017313, Guinea pig)

Protein Percentage 74.6%
CDS Percentage 81.75%
Ka/Ks Ratio 0.38539 (Ka = 0.1621, Ks = 0.4206)

SCT ENSG00000070031 (Human)

Gene Details

secretin

External Links

Gene Match (Ensembl Protein ID: ENSP00000176195, Human)

Protein Percentage 65.29%
CDS Percentage 73.28%
Ka/Ks Ratio 0.28667 (Ka = 0.2569, Ks = 0.896)

Sct ENSMUSG00000038580 (Mouse)

Gene Details

secretin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128729, Mouse)

Protein Percentage 62.7%
CDS Percentage 71.43%
Ka/Ks Ratio 0.30497 (Ka = 0.2821, Ks = 0.925)

Sct ENSRNOG00000017873 (Rat)

Gene Details

secretin (Sct), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024094, Rat)

Protein Percentage 60.32%
CDS Percentage 71.43%
Ka/Ks Ratio 0.3751 (Ka = 0.3044, Ks = 0.8114)

Genome Location

Sequence Coding sequence

Length: 381 bp    Location: 21840894..21843341   Strand: +
>XM_004851701.1
ATGGCCCCTTGCCGGCCACTGCTGCTGCTGCTGCTGCTGCTCGGGGACCCTGCTGCACACCCCGCACCGCCCAGGGCCGCACGACACTCGGACGGGACGTTCACCAGTGAGCTCAGCCGCCTGCGGGACAGTGCCCAGCTGCAGCGCCTGCTGCAGGGCCTGGTGGGCAAGCGCAGCGAGCAGGTTGCAGAGAACAGCGCCACCGGGTCCAAGCCTGTAGACGGCCAGCTGTGCCTGCTGTGGTCAGATGTGCCCACCCTGCAGGCCTGGACGCCCCTGGGGCACCCCATGGGCCTCTCCCCATCTCCCTGGCTGCCTCCTGGCCCCAGGCCCGGAGCCAAGATTTCAGACCCTGCAGGAGATATCCGGAGTCCTCGATGA

Related Sequences

XP_004851758.1 Protein

Sct PREDICTED: secretin isoform X2 [Heterocephalus glaber]

Length: 126 aa      View alignments
>XP_004851758.1
MAPCRPLLLLLLLLGDPAAHPAPPRAARHSDGTFTSELSRLRDSAQLQRLLQGLVGKRSEQVAENSATGSKPVDGQLCLLWSDVPTLQAWTPLGHPMGLSPSPWLPPGPRPGAKISDPAGDIRSPR