Sequence details NCBI ID: XM_004851609.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rcn1
Gene Name reticulocalbin 1, EF-hand calcium binding domain
Entrez Gene ID 101714291

Database interlinks

Part of NW_004624766.1 (Scaffold)

For more information consult the page for NW_004624766.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RCN1 ENSCPOG00000004686 (Guinea pig)

Gene Details

reticulocalbin 1, EF-hand calcium binding domain

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004218, Guinea pig)

Protein Percentage 89.88%
CDS Percentage 86.61%
Ka/Ks Ratio 0.03987 (Ka = 0.0535, Ks = 1.3428)

RCN1 ENSG00000049449 (Human)

Gene Details

reticulocalbin 1, EF-hand calcium binding domain

External Links

Gene Match (Ensembl Protein ID: ENSP00000054950, Human)

Protein Percentage 87.46%
CDS Percentage 81.75%
Ka/Ks Ratio 0.04806 (Ka = 0.0708, Ks = 1.4726)

Rcn1 ENSMUSG00000005973 (Mouse)

Gene Details

reticulocalbin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006128, Mouse)

Protein Percentage 89.81%
CDS Percentage 84.26%
Ka/Ks Ratio 0.03846 (Ka = 0.053, Ks = 1.3772)

Genome Location

Sequence Coding sequence

Length: 984 bp    Location: 20732406..20739408   Strand: +
Raw sequence   
>XM_004851609.1
ATGGCGCGCGCGGGGCTCGGCGCGGGGCTCGGGCTGGCGCTGGCGCTGGCGCTGGCGCTGTCGCCGTCGCGGGCCAAGCCCACGCTGCGCAAGGAGCGCGTGCTGCGCCCTGACTCCGAGCTGGGCGCGCGGCCGCCCGAGGGCAACGGCAGCTTCCAGTACGACCACGAGGCCTTCCTGGGCCGCGAGGACGCGCGTGGCTTCGACCAGCTCAGCCCGGAGGAGAGCAGGGCCCGGCTGGGGAAGATTGTGGACCGAATCGACAGTGATGGAGACGGCTTCGTCACCACTGAGGAGCTCAAAGTTTGGATCAAACGGGTGCAGAAAAGATACATCTATGATAATGTCGCCAAGGTCTGGAAGGACTACGACAGAGACAAAGACAACAGGATCTCCTGGGAGGAGTATAAACAAGCCACCTACGGCTACTACCTGGGGAGCCCTGCAGAGTTCCAGGACAGCGCAGACCATCTCACCTTCAAAAAGATGCTGCCCCGGGACGAGAGAAGGTTCAAGGCCGCGGACCTGGATGGGGACCTGGCCGCCACTCGAGAGGAGTTCACCGCCTTCCTGCACCCTGAGGAGTTCGAGCACATGAAGGAGATCGTGGTTTTGGAAACGCTGGAGGACATCGACAAGAACGGGGACGGCTTTGTGGACCAGGATGAGTACATCGCGGACATGTTTTCCCACGAGGACGGTGGCCCTGAGCCAGACTGGGTCTTGTCGGAGCGAGAGCAGTTCAGTGACTTCCGAGACCTGAACAAGGACGGGAAGCTGGACCAGGACGAGATTCGGCACTGGATCCTCCCGCAGGACTACGACCACGCGCAGGCCGAGGCGCGGCACCTGGTGTACGAGTCGGACAGGAACAAGGATGAGAAGCTCACCAAGGAGGAAATCTTGGACAACTGGAACATGTTTGTGGGGAGCCAGGCCACCAACTACGGCGAGGATCTCACCAAGAGTCACGACGAGCTGTAG

Related Sequences

XP_004851666.1 Protein

Rcn1 PREDICTED: reticulocalbin-1 [Heterocephalus glaber]

Length: 327 aa      
>XP_004851666.1
MARAGLGAGLGLALALALALSPSRAKPTLRKERVLRPDSELGARPPEGNGSFQYDHEAFLGREDARGFDQLSPEESRARLGKIVDRIDSDGDGFVTTEELKVWIKRVQKRYIYDNVAKVWKDYDRDKDNRISWEEYKQATYGYYLGSPAEFQDSADHLTFKKMLPRDERRFKAADLDGDLAATREEFTAFLHPEEFEHMKEIVVLETLEDIDKNGDGFVDQDEYIADMFSHEDGGPEPDWVLSEREQFSDFRDLNKDGKLDQDEIRHWILPQDYDHAQAEARHLVYESDRNKDEKLTKEEILDNWNMFVGSQATNYGEDLTKSHDEL